RNA–Protein interactions for RNA: ENST00000307289.10

SYVN1-202, Transcript of synoviolin 1, humanhuman

TSL 1 (best) BASIC

Gene SYVN1, Length 2,841 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-202ENST00000307289 NIPA2Q8N8Q9 360 aa17.25■□□□□ 0.35
SYVN1-202ENST00000307289 KCTD6Q8NC69 237 aa17.25■□□□□ 0.35
SYVN1-202ENST00000307289 MAML1Q92585 1016 aa17.25■□□□□ 0.35
SYVN1-202ENST00000307289 PRCCQ92733 491 aaPredicted RBP17.25■□□□□ 0.35
SYVN1-202ENST00000307289 STMN4Q9H169 189 aaPredicted RBP17.25■□□□□ 0.35
SYVN1-202ENST00000307289 CDHR5Q9HBB8 845 aa17.25■□□□□ 0.35
SYVN1-202ENST00000307289 GGA2Q9UJY4 613 aa17.25■□□□□ 0.35
SYVN1-202ENST00000307289 CCT8L1PA6NM43 557 aa17.25■□□□□ 0.35
SYVN1-202ENST00000307289 CTCFP49711 727 aaPredicted RBP17.25■□□□□ 0.35
SYVN1-202ENST00000307289 WDR4P57081 412 aaKnown RBP17.25■□□□□ 0.35
SYVN1-202ENST00000307289 GPX6P59796 221 aa17.25■□□□□ 0.35
SYVN1-202ENST00000307289 ATP11AP98196 1134 aa17.25■□□□□ 0.35
SYVN1-202ENST00000307289 CGB2Q6NT52 195 aa17.25■□□□□ 0.35
SYVN1-202ENST00000307289 FAM47EQ6ZV65 393 aa17.25■□□□□ 0.35
SYVN1-202ENST00000307289 C16orf70Q9BSU1 422 aa17.25■□□□□ 0.35
SYVN1-202ENST00000307289 GRID1Q9ULK0 1009 aa17.25■□□□□ 0.35
SYVN1-202ENST00000307289 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.25■□□□□ 0.35
SYVN1-202ENST00000307289 E5RJQ4 531 aa17.24■□□□□ 0.35
SYVN1-202ENST00000307289 OSBPP22059 807 aa17.24■□□□□ 0.35
SYVN1-202ENST00000307289 PHKA2P46019 1235 aa17.24■□□□□ 0.35
SYVN1-202ENST00000307289 CPT1BQ92523 772 aa17.24■□□□□ 0.35
SYVN1-202ENST00000307289 LHX5Q9H2C1 402 aa17.24■□□□□ 0.35
SYVN1-202ENST00000307289 SLC40A1Q9NP59 571 aa17.24■□□□□ 0.35
SYVN1-202ENST00000307289 FAM49BQ9NUQ9 324 aa17.24■□□□□ 0.35
SYVN1-202ENST00000307289 GJD2Q9UKL4 321 aa17.24■□□□□ 0.35
SYVN1-202ENST00000307289 CDH16O75309 829 aa17.24■□□□□ 0.35
SYVN1-202ENST00000307289 RPL22P35268 128 aaKnown RBP17.24■□□□□ 0.35
SYVN1-202ENST00000307289 GCLCP48506 637 aaPredicted RBP17.24■□□□□ 0.35
SYVN1-202ENST00000307289 MYO1EQ12965 1108 aa17.24■□□□□ 0.35
SYVN1-202ENST00000307289 MARCH8Q5T0T0 291 aa17.24■□□□□ 0.35
SYVN1-202ENST00000307289 RFX6Q8HWS3 928 aa17.24■□□□□ 0.35
SYVN1-202ENST00000307289 NKD2Q969F2 451 aaPredicted RBP17.24■□□□□ 0.35
SYVN1-202ENST00000307289 ZMAT2Q96NC0 199 aaKnown RBP17.24■□□□□ 0.35
SYVN1-202ENST00000307289 MPHOSPH6Q99547 160 aaKnown RBP17.24■□□□□ 0.35
SYVN1-202ENST00000307289 CCDC134Q9H6E4 229 aa17.24■□□□□ 0.35
SYVN1-202ENST00000307289 PRMT7Q9NVM4 692 aaPredicted RBP17.24■□□□□ 0.35
SYVN1-202ENST00000307289 SNX3O60493 162 aa17.23■□□□□ 0.35
SYVN1-202ENST00000307289 TSPAN1O60635 241 aa17.23■□□□□ 0.35
SYVN1-202ENST00000307289 TMEM63AO94886 807 aa17.23■□□□□ 0.35
SYVN1-202ENST00000307289 PFKMP08237 780 aa17.23■□□□□ 0.35
SYVN1-202ENST00000307289 TFE3P19532 575 aaPredicted RBP17.23■□□□□ 0.35
SYVN1-202ENST00000307289 CYP4V2Q6ZWL3 525 aaPredicted RBP17.23■□□□□ 0.35
SYVN1-202ENST00000307289 CFAP57Q96MR6 1250 aa17.23■□□□□ 0.35
SYVN1-202ENST00000307289 B3GNT5Q9BYG0 378 aa17.23■□□□□ 0.35
SYVN1-202ENST00000307289 FAM49AQ9H0Q0 323 aaPredicted RBP17.23■□□□□ 0.35
SYVN1-202ENST00000307289 SAMD15Q9P1V8 674 aa17.23■□□□□ 0.35
SYVN1-202ENST00000307289 USP18Q9UMW8 372 aa17.23■□□□□ 0.35
SYVN1-202ENST00000307289 TRIP11Q15643 1979 aa17.23■□□□□ 0.35
SYVN1-202ENST00000307289 CLUHO75153 1309 aa17.23■□□□□ 0.35
SYVN1-202ENST00000307289 ITGAVP06756 1048 aa17.23■□□□□ 0.35
SYVN1-202ENST00000307289 TMEM132DQ14C87 1099 aa17.23■□□□□ 0.35
SYVN1-202ENST00000307289 DRICH1Q6PGQ1 229 aaPredicted RBP17.23■□□□□ 0.35
SYVN1-202ENST00000307289 MTHFD1LQ6UB35 978 aa17.23■□□□□ 0.35
SYVN1-202ENST00000307289 FAM183BPQ6ZVS7 135 aa17.23■□□□□ 0.35
SYVN1-202ENST00000307289 CROCCP2Q86T23 111 aa17.23■□□□□ 0.35
SYVN1-202ENST00000307289 LINC01465Q8N7H1 131 aa17.23■□□□□ 0.35
SYVN1-202ENST00000307289 LENG1Q96BZ8 264 aaPredicted RBP17.23■□□□□ 0.35
SYVN1-202ENST00000307289 TGS1Q96RS0 853 aaKnown RBP17.23■□□□□ 0.35
SYVN1-202ENST00000307289 MRPL45Q9BRJ2 306 aaKnown RBP17.23■□□□□ 0.35
SYVN1-202ENST00000307289 ADPGKQ9BRR6 497 aa17.23■□□□□ 0.35
SYVN1-202ENST00000307289 MROH8Q9H579 483 aa17.23■□□□□ 0.35
SYVN1-202ENST00000307289 TSPAN16Q9UKR8 245 aa17.23■□□□□ 0.35
SYVN1-202ENST00000307289 STRIP2Q9ULQ0 834 aa17.23■□□□□ 0.35
SYVN1-202ENST00000307289 DRG1Q9Y295 367 aaKnown RBP17.23■□□□□ 0.35
SYVN1-202ENST00000307289 SCN1AP35498 2009 aa17.22■□□□□ 0.35
SYVN1-202ENST00000307289 IL18RAPO95256 599 aa17.22■□□□□ 0.35
SYVN1-202ENST00000307289 SNAI1O95863 264 aaPredicted RBP17.22■□□□□ 0.35
SYVN1-202ENST00000307289 OR6B2Q6IFH4 312 aa17.22■□□□□ 0.35
SYVN1-202ENST00000307289 IGDCC3Q8IVU1 814 aa17.22■□□□□ 0.35
SYVN1-202ENST00000307289 BBOF1Q8ND07 529 aa17.22■□□□□ 0.35
SYVN1-202ENST00000307289 C18orf25Q96B23 403 aaPredicted RBP17.22■□□□□ 0.35
SYVN1-202ENST00000307289 KLF6Q99612 283 aaPredicted RBP17.22■□□□□ 0.35
SYVN1-202ENST00000307289 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.22■□□□□ 0.352e-8■□□□□ 8.5
SYVN1-202ENST00000307289 SETD4Q9NVD3 440 aa17.22■□□□□ 0.35
SYVN1-202ENST00000307289 DPP3Q9NY33 737 aa17.22■□□□□ 0.35
SYVN1-202ENST00000307289 DDX56Q9NY93 547 aaKnown RBP17.22■□□□□ 0.35
SYVN1-202ENST00000307289 LGALS13Q9UHV8 139 aa17.22■□□□□ 0.35
SYVN1-202ENST00000307289 H3BRB1 525 aa17.22■□□□□ 0.35
SYVN1-202ENST00000307289 AVILO75366 819 aa17.22■□□□□ 0.35
SYVN1-202ENST00000307289 TCEA3O75764 348 aa17.22■□□□□ 0.35
SYVN1-202ENST00000307289 TRUB2O95900 331 aaKnown RBP17.22■□□□□ 0.35
SYVN1-202ENST00000307289 STX2P32856 288 aa17.22■□□□□ 0.35
SYVN1-202ENST00000307289 SLC26A2P50443 739 aa17.22■□□□□ 0.35
SYVN1-202ENST00000307289 STAT4Q14765 748 aa17.22■□□□□ 0.35
SYVN1-202ENST00000307289 ZC3H12AQ5D1E8 599 aaKnown RBP17.22■□□□□ 0.35
SYVN1-202ENST00000307289 C1orf228Q6PIY5 440 aa17.22■□□□□ 0.35
SYVN1-202ENST00000307289 ACOT1Q86TX2 421 aa17.22■□□□□ 0.35
SYVN1-202ENST00000307289 SCUBE3Q8IX30 993 aa17.22■□□□□ 0.35
SYVN1-202ENST00000307289 CKAP2Q8WWK9 683 aa17.22■□□□□ 0.35
SYVN1-202ENST00000307289 RXFP2Q8WXD0 754 aa17.22■□□□□ 0.35
SYVN1-202ENST00000307289 KIF12Q96FN5 646 aa17.22■□□□□ 0.35
SYVN1-202ENST00000307289 EIF2AQ9BY44 585 aaKnown RBP17.22■□□□□ 0.35
SYVN1-202ENST00000307289 TUT1Q9H6E5 874 aaKnown RBP17.22■□□□□ 0.35
SYVN1-202ENST00000307289 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.22■□□□□ 0.352e-6■■□□□ 13.6
SYVN1-202ENST00000307289 FARP1Q9Y4F1 1045 aaPredicted RBP17.22■□□□□ 0.35
SYVN1-202ENST00000307289 DICER1Q9UPY3 1922 aaKnown RBP17.22■□□□□ 0.35
SYVN1-202ENST00000307289 MED7O43513 233 aa17.21■□□□□ 0.35
SYVN1-202ENST00000307289 GABBR2O75899 941 aa17.21■□□□□ 0.35
SYVN1-202ENST00000307289 COPS2P61201 443 aa17.21■□□□□ 0.35
SYVN1-202ENST00000307289 LMNB2Q03252 620 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms