RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 TCRBV5S1A1TA0A578 114 aa15.27■□□□□ 0.03
SHCBP1-201ENST00000303383 HSF2BPO75031 334 aa15.27■□□□□ 0.03
SHCBP1-201ENST00000303383 ECEL1O95672 775 aa15.27■□□□□ 0.03
SHCBP1-201ENST00000303383 PDGFRAP16234 1089 aa15.27■□□□□ 0.03
SHCBP1-201ENST00000303383 COILP38432 576 aaPredicted RBP15.27■□□□□ 0.03
SHCBP1-201ENST00000303383 CLCNKBP51801 687 aa15.27■□□□□ 0.03
SHCBP1-201ENST00000303383 WSCD1Q658N2 575 aa15.27■□□□□ 0.03
SHCBP1-201ENST00000303383 FAM183BPQ6ZVS7 135 aa15.27■□□□□ 0.03
SHCBP1-201ENST00000303383 KBTBD7Q8WVZ9 684 aa15.27■□□□□ 0.03
SHCBP1-201ENST00000303383 LPIN3Q9BQK8 851 aa15.27■□□□□ 0.03
SHCBP1-201ENST00000303383 UBN1Q9NPG3 1134 aa15.27■□□□□ 0.03
SHCBP1-201ENST00000303383 HOMER3Q9NSC5 361 aa15.27■□□□□ 0.03
SHCBP1-201ENST00000303383 PCSK1NQ9UHG2 260 aa15.27■□□□□ 0.03
SHCBP1-201ENST00000303383 FEZ2Q9UHY8 353 aaPredicted RBP15.27■□□□□ 0.03
SHCBP1-201ENST00000303383 A0A0U1RQF3 1178 aa15.26■□□□□ 0.03
SHCBP1-201ENST00000303383 FGFR1P11362 822 aa15.26■□□□□ 0.03
SHCBP1-201ENST00000303383 CKBP12277 381 aa15.26■□□□□ 0.03
SHCBP1-201ENST00000303383 GPD1P21695 349 aa15.26■□□□□ 0.03
SHCBP1-201ENST00000303383 GABRB2P47870 512 aa15.26■□□□□ 0.03
SHCBP1-201ENST00000303383 ATP13A4Q4VNC1 1196 aa15.26■□□□□ 0.03
SHCBP1-201ENST00000303383 LRRC38Q5VT99 294 aa15.26■□□□□ 0.03
SHCBP1-201ENST00000303383 ARHGAP17Q68EM7 881 aa15.26■□□□□ 0.03
SHCBP1-201ENST00000303383 TTC30AQ86WT1 665 aa15.26■□□□□ 0.03
SHCBP1-201ENST00000303383 ZNF784Q8NCA9 323 aaPredicted RBP15.26■□□□□ 0.03
SHCBP1-201ENST00000303383 SLC2A14Q8TDB8 520 aa15.26■□□□□ 0.03
SHCBP1-201ENST00000303383 FNIP1Q8TF40 1166 aa15.26■□□□□ 0.03
SHCBP1-201ENST00000303383 GRK7Q8WTQ7 553 aa15.26■□□□□ 0.03
SHCBP1-201ENST00000303383 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.26■□□□□ 0.03
SHCBP1-201ENST00000303383 MCRS1Q96EZ8 462 aa15.26■□□□□ 0.03
SHCBP1-201ENST00000303383 ERP44Q9BS26 406 aa15.26■□□□□ 0.03
SHCBP1-201ENST00000303383 CAND2O75155 1236 aa15.26■□□□□ 0.03
SHCBP1-201ENST00000303383 ACAT1P24752 427 aaKnown RBP15.26■□□□□ 0.03
SHCBP1-201ENST00000303383 KCNJ1P48048 391 aa15.26■□□□□ 0.03
SHCBP1-201ENST00000303383 FNTAP49354 379 aa15.26■□□□□ 0.03
SHCBP1-201ENST00000303383 ZNF252P-AS1Q0IIN9 211 aa15.26■□□□□ 0.03
SHCBP1-201ENST00000303383 TRADDQ15628 312 aa15.26■□□□□ 0.03
SHCBP1-201ENST00000303383 CDO1Q16878 200 aa15.26■□□□□ 0.03
SHCBP1-201ENST00000303383 PMF1Q6P1K2 205 aa15.26■□□□□ 0.03
SHCBP1-201ENST00000303383 CRYBG2Q8N1P7 616 aa15.26■□□□□ 0.03
SHCBP1-201ENST00000303383 NIPA2Q8N8Q9 360 aa15.26■□□□□ 0.03
SHCBP1-201ENST00000303383 ANKRD52Q8NB46 1076 aa15.26■□□□□ 0.03
SHCBP1-201ENST00000303383 B3GALNT2Q8NCR0 500 aa15.26■□□□□ 0.03
SHCBP1-201ENST00000303383 SH3TC2Q8TF17 1288 aa15.26■□□□□ 0.03
SHCBP1-201ENST00000303383 ACSF2Q96CM8 615 aaPredicted RBP15.26■□□□□ 0.03
SHCBP1-201ENST00000303383 VIPAS39Q9H9C1 493 aa15.26■□□□□ 0.03
SHCBP1-201ENST00000303383 GOLGA6BA6NDN3 693 aa15.26■□□□□ 0.03
SHCBP1-201ENST00000303383 POLR3GO15318 223 aaPredicted RBP15.26■□□□□ 0.03
SHCBP1-201ENST00000303383 MGEA5O60502 916 aa15.26■□□□□ 0.03
SHCBP1-201ENST00000303383 ZNF623O75123 536 aa15.26■□□□□ 0.03
SHCBP1-201ENST00000303383 TJP3O95049 919 aa15.26■□□□□ 0.03
SHCBP1-201ENST00000303383 KCTD19Q17RG1 926 aaPredicted RBP15.26■□□□□ 0.03
SHCBP1-201ENST00000303383 SMTNL2Q2TAL5 461 aa15.26■□□□□ 0.03
SHCBP1-201ENST00000303383 OSBPL7Q9BZF2 842 aa15.26■□□□□ 0.03
SHCBP1-201ENST00000303383 MIOSQ9NXC5 875 aa15.26■□□□□ 0.03
SHCBP1-201ENST00000303383 DDX43Q9NXZ2 648 aaKnown RBP15.26■□□□□ 0.03
SHCBP1-201ENST00000303383 B3GAT3O94766 335 aa15.25■□□□□ 0.03
SHCBP1-201ENST00000303383 GAS8O95995 478 aa15.25■□□□□ 0.03
SHCBP1-201ENST00000303383 LCP1P13796 627 aa15.25■□□□□ 0.03
SHCBP1-201ENST00000303383 WARSP23381 471 aaKnown RBP15.25■□□□□ 0.03
SHCBP1-201ENST00000303383 OAS2P29728 719 aaKnown RBP15.25■□□□□ 0.03
SHCBP1-201ENST00000303383 RPL9P32969 192 aaKnown RBP15.25■□□□□ 0.03
SHCBP1-201ENST00000303383 AFF1P51825 1210 aaKnown RBP15.25■□□□□ 0.03
SHCBP1-201ENST00000303383 GSCP56915 257 aaPredicted RBP15.25■□□□□ 0.03
SHCBP1-201ENST00000303383 NNTQ13423 1086 aa15.25■□□□□ 0.03
SHCBP1-201ENST00000303383 MRPL10Q7Z7H8 261 aaKnown RBP15.25■□□□□ 0.03
SHCBP1-201ENST00000303383 METTL23Q86XA0 190 aa15.25■□□□□ 0.03
SHCBP1-201ENST00000303383 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.25■□□□□ 0.03
SHCBP1-201ENST00000303383 PCYOX1Q9UHG3 505 aa15.25■□□□□ 0.03
SHCBP1-201ENST00000303383 TULP2O00295 520 aa15.25■□□□□ 0.03
SHCBP1-201ENST00000303383 TCF4P15884 667 aa15.25■□□□□ 0.03
SHCBP1-201ENST00000303383 LHX8Q68G74 356 aa15.25■□□□□ 0.03
SHCBP1-201ENST00000303383 SCYL2Q6P3W7 929 aa15.25■□□□□ 0.03
SHCBP1-201ENST00000303383 GSTA5Q7RTV2 222 aa15.25■□□□□ 0.03
SHCBP1-201ENST00000303383 SCUBE3Q8IX30 993 aa15.25■□□□□ 0.03
SHCBP1-201ENST00000303383 RXFP2Q8WXD0 754 aa15.25■□□□□ 0.03
SHCBP1-201ENST00000303383 ATG4AQ8WYN0 398 aa15.25■□□□□ 0.03
SHCBP1-201ENST00000303383 CAVIN3Q969G5 261 aa15.25■□□□□ 0.03
SHCBP1-201ENST00000303383 ASIC3Q9UHC3 531 aa15.25■□□□□ 0.03
SHCBP1-201ENST00000303383 HPCAL4Q9UM19 191 aa15.25■□□□□ 0.03
SHCBP1-201ENST00000303383 SNX24Q9Y343 169 aa15.25■□□□□ 0.03
SHCBP1-201ENST00000303383 TIMM13Q9Y5L4 95 aaPredicted RBP15.25■□□□□ 0.03
SHCBP1-201ENST00000303383 SQORQ9Y6N5 450 aa15.25■□□□□ 0.03
SHCBP1-201ENST00000303383 SDC4P31431 198 aa15.25■□□□□ 0.03
SHCBP1-201ENST00000303383 LHX1P48742 406 aa15.25■□□□□ 0.03
SHCBP1-201ENST00000303383 PAN2Q504Q3 1202 aaKnown RBP15.25■□□□□ 0.03
SHCBP1-201ENST00000303383 TMEM86AQ8N2M4 240 aa15.25■□□□□ 0.03
SHCBP1-201ENST00000303383 LRRC45Q96CN5 670 aa15.25■□□□□ 0.03
SHCBP1-201ENST00000303383 CNPY3Q9BT09 278 aa15.25■□□□□ 0.03
SHCBP1-201ENST00000303383 NGRNQ9NPE2 291 aaKnown RBP15.25■□□□□ 0.03
SHCBP1-201ENST00000303383 PTPN1P18031 435 aaKnown RBP15.24■□□□□ 0.03
SHCBP1-201ENST00000303383 ACADSBP45954 432 aa15.24■□□□□ 0.03
SHCBP1-201ENST00000303383 CDR1P51861 262 aa15.24■□□□□ 0.03
SHCBP1-201ENST00000303383 ATP11AP98196 1134 aa15.24■□□□□ 0.03
SHCBP1-201ENST00000303383 CALCOCO2Q13137 446 aa15.24■□□□□ 0.03
SHCBP1-201ENST00000303383 ACAP1Q15027 740 aa15.24■□□□□ 0.03
SHCBP1-201ENST00000303383 KCNT1Q5JUK3 1230 aa15.24■□□□□ 0.03
SHCBP1-201ENST00000303383 FAM26DQ5JW98 314 aa15.24■□□□□ 0.03
SHCBP1-201ENST00000303383 CFAP58Q5T655 872 aa15.24■□□□□ 0.03
SHCBP1-201ENST00000303383 GLB1LQ6UWU2 654 aa15.24■□□□□ 0.03
SHCBP1-201ENST00000303383 MFSD7Q6UXD7 560 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms