RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 PRKD2Q9BZL6 878 aa23.95■■□□□ 1.42
LINC01116-201ENST00000295549 CSNK1G1Q9HCP0 422 aa23.95■■□□□ 1.42
LINC01116-201ENST00000295549 ACP6Q9NPH0 428 aa23.95■■□□□ 1.42
LINC01116-201ENST00000295549 KRT82Q9NSB4 513 aa23.95■■□□□ 1.42
LINC01116-201ENST00000295549 CCDC195A0A1B0GUA6 201 aa23.94■■□□□ 1.42
LINC01116-201ENST00000295549 GOLGA6L3A6NEY3 463 aa23.94■■□□□ 1.42
LINC01116-201ENST00000295549 TRIM66O15016 1216 aa23.94■■□□□ 1.42
LINC01116-201ENST00000295549 AP1G2O75843 785 aa23.94■■□□□ 1.42
LINC01116-201ENST00000295549 SOAT2O75908 522 aa23.94■■□□□ 1.42
LINC01116-201ENST00000295549 LRG1P02750 347 aa23.94■■□□□ 1.42
LINC01116-201ENST00000295549 GYPCP04921 128 aa23.94■■□□□ 1.42
LINC01116-201ENST00000295549 FAM200BP0CF97 657 aa23.94■■□□□ 1.42
LINC01116-201ENST00000295549 BRD2P25440 801 aaKnown RBP23.94■■□□□ 1.42
LINC01116-201ENST00000295549 GRIK1P39086 918 aa23.94■■□□□ 1.42
LINC01116-201ENST00000295549 TWF1Q12792 350 aa23.94■■□□□ 1.42
LINC01116-201ENST00000295549 TRIM14Q14142 442 aa23.94■■□□□ 1.42
LINC01116-201ENST00000295549 MEA1Q16626 185 aa23.94■■□□□ 1.42
LINC01116-201ENST00000295549 CYP26C1Q6V0L0 522 aa23.94■■□□□ 1.42
LINC01116-201ENST00000295549 EP400NLQ6ZTU2 488 aa23.94■■□□□ 1.42
LINC01116-201ENST00000295549 ZNF397Q8NF99 534 aaPredicted RBP23.94■■□□□ 1.42
LINC01116-201ENST00000295549 HLA-CQ95604 372 aa23.94■■□□□ 1.42
LINC01116-201ENST00000295549 NUCKS1Q9H1E3 243 aaKnown RBP23.94■■□□□ 1.42
LINC01116-201ENST00000295549 UBE2ZQ9H832 354 aaPredicted RBP23.94■■□□□ 1.42
LINC01116-201ENST00000295549 TMEM30AQ9NV96 361 aa23.94■■□□□ 1.42
LINC01116-201ENST00000295549 TSPAN16Q9UKR8 245 aa23.94■■□□□ 1.42
LINC01116-201ENST00000295549 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.94■■□□□ 1.42
LINC01116-201ENST00000295549 MED7O43513 233 aa23.93■■□□□ 1.42
LINC01116-201ENST00000295549 GFPT2O94808 682 aa23.93■■□□□ 1.42
LINC01116-201ENST00000295549 CALCAP01258 141 aa23.93■■□□□ 1.42
LINC01116-201ENST00000295549 CYP11B1P15538 503 aa23.93■■□□□ 1.42
LINC01116-201ENST00000295549 ATF6P18850 670 aa23.93■■□□□ 1.42
LINC01116-201ENST00000295549 CACNA2D1P54289 1103 aa23.93■■□□□ 1.42
LINC01116-201ENST00000295549 EPHB3P54753 998 aa23.93■■□□□ 1.42
LINC01116-201ENST00000295549 ZBED6P86452 979 aa23.93■■□□□ 1.42
LINC01116-201ENST00000295549 DDR2Q16832 855 aa23.93■■□□□ 1.42
LINC01116-201ENST00000295549 C12orf76Q8N812 135 aaPredicted RBP23.93■■□□□ 1.42
LINC01116-201ENST00000295549 ZNF707Q96C28 371 aaPredicted RBP23.93■■□□□ 1.42
LINC01116-201ENST00000295549 SPATA17Q96L03 361 aa23.93■■□□□ 1.42
LINC01116-201ENST00000295549 SMOQ99835 787 aa23.93■■□□□ 1.42
LINC01116-201ENST00000295549 S1PR5Q9H228 398 aa23.93■■□□□ 1.42
LINC01116-201ENST00000295549 DMAP1Q9NPF5 467 aaPredicted RBP23.93■■□□□ 1.42
LINC01116-201ENST00000295549 HESX1Q9UBX0 185 aa23.93■■□□□ 1.42
LINC01116-201ENST00000295549 COG5Q9UP83 839 aa23.93■■□□□ 1.42
LINC01116-201ENST00000295549 LUC7L2Q9Y383 392 aaKnown RBP23.93■■□□□ 1.42
LINC01116-201ENST00000295549 ASB3Q9Y575 518 aa23.93■■□□□ 1.42
LINC01116-201ENST00000295549 LRRC53A6NM62 1247 aa23.93■■□□□ 1.42
LINC01116-201ENST00000295549 F8VP50 259 aa23.93■■□□□ 1.42
LINC01116-201ENST00000295549 THAP12O43422 761 aa23.93■■□□□ 1.42
LINC01116-201ENST00000295549 XYLBO75191 536 aa23.93■■□□□ 1.42
LINC01116-201ENST00000295549 CCDC172P0C7W6 258 aa23.93■■□□□ 1.42
LINC01116-201ENST00000295549 NPR3P17342 541 aa23.93■■□□□ 1.42
LINC01116-201ENST00000295549 ITIH3Q06033 890 aa23.93■■□□□ 1.42
LINC01116-201ENST00000295549 PKDCCQ504Y2 493 aa23.93■■□□□ 1.42
LINC01116-201ENST00000295549 CLEC20AQ6ZU45 233 aa23.93■■□□□ 1.42
LINC01116-201ENST00000295549 SCN4BQ8IWT1 228 aa23.93■■□□□ 1.42
LINC01116-201ENST00000295549 KCNK16Q96T55 309 aa23.93■■□□□ 1.42
LINC01116-201ENST00000295549 ADAM7Q9H2U9 754 aa23.93■■□□□ 1.42
LINC01116-201ENST00000295549 AIPL1Q9NZN9 384 aa23.93■■□□□ 1.42
LINC01116-201ENST00000295549 BRWD1Q9NSI6 2320 aa23.92■■□□□ 1.42
LINC01116-201ENST00000295549 XIRP2A4UGR9 3374 aa23.92■■□□□ 1.42
LINC01116-201ENST00000295549 MTCL1Q9Y4B5 1905 aaKnown RBP23.92■■□□□ 1.42
LINC01116-201ENST00000295549 FERP16591 822 aa23.92■■□□□ 1.42
LINC01116-201ENST00000295549 ANXA13P27216 316 aa23.92■■□□□ 1.42
LINC01116-201ENST00000295549 CASP14P31944 242 aa23.92■■□□□ 1.42
LINC01116-201ENST00000295549 GPR15P49685 360 aa23.92■■□□□ 1.42
LINC01116-201ENST00000295549 PDE6CP51160 858 aa23.92■■□□□ 1.42
LINC01116-201ENST00000295549 BCAT1P54687 386 aa23.92■■□□□ 1.42
LINC01116-201ENST00000295549 SLC8A3P57103 927 aa23.92■■□□□ 1.42
LINC01116-201ENST00000295549 GOLGA7BQ2TAP0 167 aa23.92■■□□□ 1.42
LINC01116-201ENST00000295549 TMC5Q6UXY8 1006 aa23.92■■□□□ 1.42
LINC01116-201ENST00000295549 TTC30AQ86WT1 665 aa23.92■■□□□ 1.42
LINC01116-201ENST00000295549 ELMOD1Q8N336 334 aa23.92■■□□□ 1.42
LINC01116-201ENST00000295549 EPS8L1Q8TE68 723 aa23.92■■□□□ 1.42
LINC01116-201ENST00000295549 CPLX3Q8WVH0 158 aa23.92■■□□□ 1.42
LINC01116-201ENST00000295549 SYN2Q92777 582 aaPredicted RBP23.92■■□□□ 1.42
LINC01116-201ENST00000295549 UBXN6Q9BZV1 441 aa23.92■■□□□ 1.42
LINC01116-201ENST00000295549 GRPEL1Q9HAV7 217 aa23.92■■□□□ 1.42
LINC01116-201ENST00000295549 PNPLA8Q9NP80 782 aa23.92■■□□□ 1.42
LINC01116-201ENST00000295549 PCDHGC3Q9UN70 934 aa23.92■■□□□ 1.42
LINC01116-201ENST00000295549 CCL16O15467 120 aa23.91■■□□□ 1.42
LINC01116-201ENST00000295549 BEST1O76090 585 aa23.91■■□□□ 1.42
LINC01116-201ENST00000295549 MICAL2O94851 1124 aa23.91■■□□□ 1.42
LINC01116-201ENST00000295549 MAP3K7CLP57077 242 aa23.91■■□□□ 1.42
LINC01116-201ENST00000295549 BST2Q10589 180 aaKnown RBP23.91■■□□□ 1.42
LINC01116-201ENST00000295549 RARS2Q5T160 578 aaKnown RBP23.91■■□□□ 1.42
LINC01116-201ENST00000295549 SFMBT2Q5VUG0 894 aa23.91■■□□□ 1.42
LINC01116-201ENST00000295549 IRF2BP2Q7Z5L9 587 aa23.91■■□□□ 1.42
LINC01116-201ENST00000295549 GPR149Q86SP6 731 aa23.91■■□□□ 1.42
LINC01116-201ENST00000295549 ITIH5Q86UX2 942 aa23.91■■□□□ 1.42
LINC01116-201ENST00000295549 ZNF677Q86XU0 584 aa23.91■■□□□ 1.42
LINC01116-201ENST00000295549 SMRP1Q8NCR6 262 aa23.91■■□□□ 1.42
LINC01116-201ENST00000295549 ZMIZ2Q8NF64 920 aa23.91■■□□□ 1.42
LINC01116-201ENST00000295549 DDX1Q92499 740 aaKnown RBP23.91■■□□□ 1.42
LINC01116-201ENST00000295549 PSMG2Q969U7 264 aa23.91■■□□□ 1.42
LINC01116-201ENST00000295549 ADCY5O95622 1261 aa23.9■■□□□ 1.42
LINC01116-201ENST00000295549 SETSIPP0DME0 302 aa23.9■■□□□ 1.42
LINC01116-201ENST00000295549 KCNA5P22460 613 aa23.9■■□□□ 1.42
LINC01116-201ENST00000295549 TBX2Q13207 712 aaPredicted RBP23.9■■□□□ 1.42
LINC01116-201ENST00000295549 VEPH1Q14D04 833 aa23.9■■□□□ 1.42
LINC01116-201ENST00000295549 SDHAF4Q5VUM1 108 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms