RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 PCDHB12Q9Y5F1 795 aa12.89□□□□□ -0.35
SLX4-201ENST00000294008 LYVE1Q9Y5Y7 322 aa12.89□□□□□ -0.35
SLX4-201ENST00000294008 A0A0G2JLW4 131 aa12.89□□□□□ -0.35
SLX4-201ENST00000294008 AKT2P31751 481 aa12.89□□□□□ -0.35
SLX4-201ENST00000294008 BLMP54132 1417 aaPredicted RBP12.89□□□□□ -0.35
SLX4-201ENST00000294008 AKR1B1P15121 316 aa12.89□□□□□ -0.35
SLX4-201ENST00000294008 FBXO32Q969P5 355 aa12.89□□□□□ -0.35
SLX4-201ENST00000294008 BBS4Q96RK4 519 aa12.89□□□□□ -0.35
SLX4-201ENST00000294008 TBC1D23Q9NUY8 699 aa12.89□□□□□ -0.35
SLX4-201ENST00000294008 EMSYQ7Z589 1322 aa12.89□□□□□ -0.35
SLX4-201ENST00000294008 CASP1P29466 404 aa12.89□□□□□ -0.35
SLX4-201ENST00000294008 EPS8Q12929 822 aa12.89□□□□□ -0.35
SLX4-201ENST00000294008 SV2CQ496J9 727 aa12.89□□□□□ -0.35
SLX4-201ENST00000294008 C16orf89Q6UX73 402 aa12.89□□□□□ -0.35
SLX4-201ENST00000294008 JPH1Q9HDC5 661 aaPredicted RBP12.89□□□□□ -0.35
SLX4-201ENST00000294008 POLR3AO14802 1390 aaPredicted RBP12.88□□□□□ -0.35
SLX4-201ENST00000294008 AP3B1O00203 1094 aa12.88□□□□□ -0.35
SLX4-201ENST00000294008 ARMCX4Q5H9R4 360 aa12.88□□□□□ -0.35
SLX4-201ENST00000294008 RDM1Q8NG50 284 aa12.88□□□□□ -0.35
SLX4-201ENST00000294008 MTFMTQ96DP5 389 aaKnown RBP12.88□□□□□ -0.35
SLX4-201ENST00000294008 UBXN6Q9BZV1 441 aa12.88□□□□□ -0.35
SLX4-201ENST00000294008 KIF14Q15058 1648 aa12.88□□□□□ -0.35
SLX4-201ENST00000294008 TAF4O00268 1085 aa12.88□□□□□ -0.35
SLX4-201ENST00000294008 GGPS1O95749 300 aa12.88□□□□□ -0.35
SLX4-201ENST00000294008 RASSF6Q6ZTQ3 369 aa12.88□□□□□ -0.35
SLX4-201ENST00000294008 LRRC8DQ7L1W4 858 aa12.88□□□□□ -0.35
SLX4-201ENST00000294008 CHPFQ8IZ52 775 aa12.88□□□□□ -0.35
SLX4-201ENST00000294008 ATP6V0D2Q8N8Y2 350 aa12.88□□□□□ -0.35
SLX4-201ENST00000294008 ZNF354BQ96LW1 612 aa12.88□□□□□ -0.35
SLX4-201ENST00000294008 ING3Q9NXR8 418 aa12.88□□□□□ -0.35
SLX4-201ENST00000294008 CARMIL3Q8ND23 1372 aa12.88□□□□□ -0.35
SLX4-201ENST00000294008 ESYT3A0FGR9 886 aa12.88□□□□□ -0.35
SLX4-201ENST00000294008 ZBTB7BO15156 539 aaPredicted RBP12.88□□□□□ -0.35
SLX4-201ENST00000294008 KATNA1O75449 491 aa12.88□□□□□ -0.35
SLX4-201ENST00000294008 SOAT2O75908 522 aa12.88□□□□□ -0.35
SLX4-201ENST00000294008 GH1P01241 217 aa12.88□□□□□ -0.35
SLX4-201ENST00000294008 MSH3P20585 1137 aa12.88□□□□□ -0.35
SLX4-201ENST00000294008 C21orf59P57076 290 aa12.88□□□□□ -0.35
SLX4-201ENST00000294008 SRP54P61011 504 aaKnown RBP12.88□□□□□ -0.35
SLX4-201ENST00000294008 GRAPQ13588 217 aa12.88□□□□□ -0.35
SLX4-201ENST00000294008 C8orf34Q49A92 452 aa12.88□□□□□ -0.35
SLX4-201ENST00000294008 ATAD3BQ5T9A4 648 aa12.88□□□□□ -0.35
SLX4-201ENST00000294008 ZNF786Q8N393 782 aa12.88□□□□□ -0.35
SLX4-201ENST00000294008 GRAPLQ8TC17 118 aaPredicted RBP12.88□□□□□ -0.35
SLX4-201ENST00000294008 NUDT12Q9BQG2 462 aa12.88□□□□□ -0.35
SLX4-201ENST00000294008 RNF26Q9BY78 433 aaPredicted RBP12.88□□□□□ -0.35
SLX4-201ENST00000294008 ANTXR1Q9H6X2 564 aa12.88□□□□□ -0.35
SLX4-201ENST00000294008 AASDHPPTQ9NRN7 309 aa12.88□□□□□ -0.35
SLX4-201ENST00000294008 BTBD3Q9Y2F9 522 aa12.88□□□□□ -0.35
SLX4-201ENST00000294008 FANCAO15360 1455 aa12.88□□□□□ -0.35
SLX4-201ENST00000294008 B2RBV5 119 aa12.88□□□□□ -0.35
SLX4-201ENST00000294008 EPHB3P54753 998 aa12.88□□□□□ -0.35
SLX4-201ENST00000294008 NPEPPSP55786 919 aa12.88□□□□□ -0.35
SLX4-201ENST00000294008 GRIK3Q13003 919 aa12.88□□□□□ -0.35
SLX4-201ENST00000294008 CATSPER1Q8NEC5 780 aa12.88□□□□□ -0.35
SLX4-201ENST00000294008 UBASH3BQ8TF42 649 aa12.88□□□□□ -0.35
SLX4-201ENST00000294008 C18orf8Q96DM3 657 aa12.88□□□□□ -0.35
SLX4-201ENST00000294008 UNKQ9C0B0 810 aaKnown RBP12.88□□□□□ -0.35
SLX4-201ENST00000294008 CYP4F12Q9HCS2 524 aa12.88□□□□□ -0.35
SLX4-201ENST00000294008 ADAM30Q9UKF2 790 aa12.88□□□□□ -0.35
SLX4-201ENST00000294008 TRIM64BA6NI03 449 aa12.88□□□□□ -0.35
SLX4-201ENST00000294008 PRPF3O43395 683 aaKnown RBP12.88□□□□□ -0.35
SLX4-201ENST00000294008 OR7A10O76100 309 aa12.88□□□□□ -0.35
SLX4-201ENST00000294008 ATP6V1B1P15313 513 aa12.88□□□□□ -0.35
SLX4-201ENST00000294008 RBP5P82980 135 aa12.88□□□□□ -0.35
SLX4-201ENST00000294008 P3H1Q32P28 736 aa12.88□□□□□ -0.35
SLX4-201ENST00000294008 RUBCNQ92622 972 aa12.88□□□□□ -0.35
SLX4-201ENST00000294008 JSRP1Q96MG2 331 aaPredicted RBP12.88□□□□□ -0.35
SLX4-201ENST00000294008 SAC3D1A6NKF1 404 aa12.88□□□□□ -0.35
SLX4-201ENST00000294008 ATP5HO75947 161 aa12.88□□□□□ -0.35
SLX4-201ENST00000294008 CYP2C9P11712 490 aa12.88□□□□□ -0.35
SLX4-201ENST00000294008 ZNF23P17027 643 aa12.88□□□□□ -0.35
SLX4-201ENST00000294008 PCP11498 1178 aaKnown RBP12.87□□□□□ -0.35
SLX4-201ENST00000294008 PHKG2P15735 406 aa12.87□□□□□ -0.35
SLX4-201ENST00000294008 ARHGDIBP52566 201 aa12.87□□□□□ -0.35
SLX4-201ENST00000294008 KCNH2Q12809 1159 aa12.87□□□□□ -0.35
SLX4-201ENST00000294008 LAMB3Q13751 1172 aa12.87□□□□□ -0.35
SLX4-201ENST00000294008 CYLC2Q14093 348 aaPredicted RBP12.87□□□□□ -0.35
SLX4-201ENST00000294008 TBC1D25Q3MII6 688 aa12.87□□□□□ -0.35
SLX4-201ENST00000294008 FGD3Q5JSP0 725 aa12.87□□□□□ -0.35
SLX4-201ENST00000294008 ATP10DQ9P241 1426 aa12.87□□□□□ -0.35
SLX4-201ENST00000294008 CBX4O00257 560 aa12.87□□□□□ -0.35
SLX4-201ENST00000294008 MMP1P03956 469 aa12.87□□□□□ -0.35
SLX4-201ENST00000294008 TFE3P19532 575 aaPredicted RBP12.87□□□□□ -0.35
SLX4-201ENST00000294008 MAGEA10P43363 369 aaPredicted RBP12.87□□□□□ -0.35
SLX4-201ENST00000294008 NDUFAF6Q330K2 333 aa12.87□□□□□ -0.35
SLX4-201ENST00000294008 LONP2Q86WA8 852 aa12.87□□□□□ -0.35
SLX4-201ENST00000294008 ZNF671Q8TAW3 534 aa12.87□□□□□ -0.35
SLX4-201ENST00000294008 RELTQ969Z4 430 aa12.87□□□□□ -0.35
SLX4-201ENST00000294008 RMND5AQ9H871 391 aa12.87□□□□□ -0.35
SLX4-201ENST00000294008 ABCB6Q9NP58 842 aa12.87□□□□□ -0.35
SLX4-201ENST00000294008 ZNF112Q9UJU3 913 aa12.87□□□□□ -0.35
SLX4-201ENST00000294008 ZBTB5O15062 677 aa12.87□□□□□ -0.35
SLX4-201ENST00000294008 P4HBP07237 508 aaKnown RBP12.87□□□□□ -0.35
SLX4-201ENST00000294008 CCNE1P24864 410 aa12.87□□□□□ -0.35
SLX4-201ENST00000294008 CHRNA5P30532 468 aa12.87□□□□□ -0.35
SLX4-201ENST00000294008 TRAF2Q12933 501 aa12.87□□□□□ -0.35
SLX4-201ENST00000294008 SUZ12Q15022 739 aaKnown RBP12.87□□□□□ -0.35
SLX4-201ENST00000294008 CCDC144BQ3MJ40 725 aa12.87□□□□□ -0.35
SLX4-201ENST00000294008 OMDQ99983 421 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms