RNA–Protein interactions for RNA: ENST00000286349.3

TRIM42-201, Transcript of tripartite motif containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM42, Length 2,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42-201ENST00000286349 SPC25Q9HBM1 224 aa7.97□□□□□ -1.13
TRIM42-201ENST00000286349 AASDHPPTQ9NRN7 309 aa7.97□□□□□ -1.13
TRIM42-201ENST00000286349 FAM114A2Q9NRY5 505 aa7.97□□□□□ -1.13
TRIM42-201ENST00000286349 KRT82Q9NSB4 513 aa7.97□□□□□ -1.13
TRIM42-201ENST00000286349 RASAL2Q9UJF2 1139 aa7.97□□□□□ -1.13
TRIM42-201ENST00000286349 COG5Q9UP83 839 aa7.97□□□□□ -1.13
TRIM42-201ENST00000286349 CNTN6Q9UQ52 1028 aa7.97□□□□□ -1.13
TRIM42-201ENST00000286349 COL1A2P08123 1366 aa7.97□□□□□ -1.13
TRIM42-201ENST00000286349 CNTNAP2Q9UHC6 1331 aa7.97□□□□□ -1.13
TRIM42-201ENST00000286349 FAM187AA6NFU0 413 aa7.97□□□□□ -1.13
TRIM42-201ENST00000286349 A6NNZ2 444 aa7.97□□□□□ -1.13
TRIM42-201ENST00000286349 TTC34A8MYJ7 566 aa7.97□□□□□ -1.13
TRIM42-201ENST00000286349 ACKR2O00590 384 aa7.97□□□□□ -1.13
TRIM42-201ENST00000286349 SEPT4O43236 478 aa7.97□□□□□ -1.13
TRIM42-201ENST00000286349 MYCP01106 439 aaPredicted RBP7.97□□□□□ -1.13
TRIM42-201ENST00000286349 CLTAP09496 248 aa7.97□□□□□ -1.13
TRIM42-201ENST00000286349 COL6A1P12109 1028 aa7.97□□□□□ -1.13
TRIM42-201ENST00000286349 UNGP13051 313 aaPredicted RBP7.97□□□□□ -1.13
TRIM42-201ENST00000286349 NSFP46459 744 aaKnown RBP7.97□□□□□ -1.13
TRIM42-201ENST00000286349 PEX5P50542 639 aa7.97□□□□□ -1.13
TRIM42-201ENST00000286349 PTENP60484 403 aa7.97□□□□□ -1.13
TRIM42-201ENST00000286349 PPFIA1Q13136 1202 aa7.97□□□□□ -1.13
TRIM42-201ENST00000286349 TAF11Q15544 211 aa7.97□□□□□ -1.13
TRIM42-201ENST00000286349 TUBB8Q3ZCM7 444 aa7.97□□□□□ -1.13
TRIM42-201ENST00000286349 DNAAF5Q86Y56 855 aa7.97□□□□□ -1.13
TRIM42-201ENST00000286349 TRPC4APQ8TEL6 797 aa7.97□□□□□ -1.13
TRIM42-201ENST00000286349 MAIP1Q8WWC4 291 aa7.97□□□□□ -1.13
TRIM42-201ENST00000286349 ZNF75CPQ92670 426 aaPredicted RBP7.97□□□□□ -1.13
TRIM42-201ENST00000286349 TBC1D31Q96DN5 1066 aa7.97□□□□□ -1.13
TRIM42-201ENST00000286349 UNC93B1Q9H1C4 597 aa7.97□□□□□ -1.13
TRIM42-201ENST00000286349 GOLPH3Q9H4A6 298 aa7.97□□□□□ -1.13
TRIM42-201ENST00000286349 STK39Q9UEW8 545 aa7.97□□□□□ -1.13
TRIM42-201ENST00000286349 MTUS1Q9ULD2 1270 aa7.97□□□□□ -1.13
TRIM42-201ENST00000286349 TRPC6Q9Y210 931 aa7.97□□□□□ -1.13
TRIM42-201ENST00000286349 MCM3APO60318 1980 aa7.96□□□□□ -1.13
TRIM42-201ENST00000286349 MYADML2A6NDP7 307 aa7.96□□□□□ -1.13
TRIM42-201ENST00000286349 BHMG1C9JSJ3 638 aaPredicted RBP7.96□□□□□ -1.13
TRIM42-201ENST00000286349 DYNC1LI2O43237 492 aaPredicted RBP7.96□□□□□ -1.13
TRIM42-201ENST00000286349 NDUFB5O43674 189 aa7.96□□□□□ -1.13
TRIM42-201ENST00000286349 DIAPH2O60879 1101 aa7.96□□□□□ -1.13
TRIM42-201ENST00000286349 SMNDC1O75940 238 aaKnown RBP eCLIP7.96□□□□□ -1.13
TRIM42-201ENST00000286349 IL18RAPO95256 599 aa7.96□□□□□ -1.13
TRIM42-201ENST00000286349 GH1P01241 217 aa7.96□□□□□ -1.13
TRIM42-201ENST00000286349 CYP1A1P04798 512 aaPredicted RBP7.96□□□□□ -1.13
TRIM42-201ENST00000286349 PSMA3P25788 255 aa7.96□□□□□ -1.13
TRIM42-201ENST00000286349 HOXC13P31276 330 aa7.96□□□□□ -1.13
TRIM42-201ENST00000286349 CHRNA3P32297 505 aa7.96□□□□□ -1.13
TRIM42-201ENST00000286349 GBP2P32456 591 aaPredicted RBP7.96□□□□□ -1.13
TRIM42-201ENST00000286349 CTNNA1P35221 906 aaKnown RBP7.96□□□□□ -1.13
TRIM42-201ENST00000286349 HOXD12P35452 270 aa7.96□□□□□ -1.13
TRIM42-201ENST00000286349 LIG3P49916 1009 aa7.96□□□□□ -1.13
TRIM42-201ENST00000286349 RNASE9P60153 205 aaKnown RBP7.96□□□□□ -1.13
TRIM42-201ENST00000286349 NOP14P78316 857 aaKnown RBP7.96□□□□□ -1.13
TRIM42-201ENST00000286349 CENPCQ03188 943 aa7.96□□□□□ -1.13
TRIM42-201ENST00000286349 CAMK2BQ13554 666 aa7.96□□□□□ -1.13
TRIM42-201ENST00000286349 NCOA4Q13772 614 aa7.96□□□□□ -1.13
TRIM42-201ENST00000286349 DUOXA2Q1HG44 320 aa7.96□□□□□ -1.13
TRIM42-201ENST00000286349 SGSM1Q2NKQ1 1148 aa7.96□□□□□ -1.13
TRIM42-201ENST00000286349 ALKBH2Q6NS38 261 aa7.96□□□□□ -1.13
TRIM42-201ENST00000286349 IRGCQ6NXR0 463 aa7.96□□□□□ -1.13
TRIM42-201ENST00000286349 MPZL3Q6UWV2 235 aa7.96□□□□□ -1.13
TRIM42-201ENST00000286349 LINC00469Q8N7U9 141 aa7.96□□□□□ -1.13
TRIM42-201ENST00000286349 RNF149Q8NC42 400 aa7.96□□□□□ -1.13
TRIM42-201ENST00000286349 SEC14L1Q92503 715 aa7.96□□□□□ -1.13
TRIM42-201ENST00000286349 C1orf74Q96LT6 269 aa7.96□□□□□ -1.13
TRIM42-201ENST00000286349 TSC22D3Q99576 134 aa7.96□□□□□ -1.13
TRIM42-201ENST00000286349 FAM129AQ9BZQ8 928 aa7.96□□□□□ -1.13
TRIM42-201ENST00000286349 MCOLN1Q9GZU1 580 aa7.96□□□□□ -1.13
TRIM42-201ENST00000286349 HAPLN2Q9GZV7 340 aa7.96□□□□□ -1.13
TRIM42-201ENST00000286349 MRPL47Q9HD33 250 aaKnown RBP7.96□□□□□ -1.13
TRIM42-201ENST00000286349 PRMT7Q9NVM4 692 aaPredicted RBP7.96□□□□□ -1.13
TRIM42-201ENST00000286349 CNOT8Q9UFF9 292 aaKnown RBP7.96□□□□□ -1.13
TRIM42-201ENST00000286349 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.96□□□□□ -1.13
TRIM42-201ENST00000286349 PCDHA3Q9Y5H8 950 aa7.96□□□□□ -1.13
TRIM42-201ENST00000286349 ZBTB42B2RXF5 422 aa7.96□□□□□ -1.14
TRIM42-201ENST00000286349 ANKRD65E5RJM6 399 aa7.96□□□□□ -1.14
TRIM42-201ENST00000286349 SPOPO43791 374 aa7.96□□□□□ -1.14
TRIM42-201ENST00000286349 RNF40O75150 1001 aa7.96□□□□□ -1.14
TRIM42-201ENST00000286349 VNN1O95497 513 aa7.96□□□□□ -1.14
TRIM42-201ENST00000286349 SYF2O95926 243 aaKnown RBP7.96□□□□□ -1.14
TRIM42-201ENST00000286349 COMTP21964 271 aa7.96□□□□□ -1.14
TRIM42-201ENST00000286349 PROZP22891 400 aa7.96□□□□□ -1.14
TRIM42-201ENST00000286349 TMOD1P28289 359 aa7.96□□□□□ -1.14
TRIM42-201ENST00000286349 PHKA2P46019 1235 aa7.96□□□□□ -1.14
TRIM42-201ENST00000286349 MTMR3Q13615 1198 aa7.96□□□□□ -1.14
TRIM42-201ENST00000286349 MESDQ14696 234 aa7.96□□□□□ -1.14
TRIM42-201ENST00000286349 PKN2Q16513 984 aaKnown RBP7.96□□□□□ -1.14
TRIM42-201ENST00000286349 FAM187BQ17R55 369 aa7.96□□□□□ -1.14
TRIM42-201ENST00000286349 LMBRD2Q68DH5 695 aaPredicted RBP7.96□□□□□ -1.14
TRIM42-201ENST00000286349 GSPT2Q8IYD1 628 aaKnown RBP7.96□□□□□ -1.14
TRIM42-201ENST00000286349 MCOLN2Q8IZK6 566 aa7.96□□□□□ -1.14
TRIM42-201ENST00000286349 TMCO5AQ8N6Q1 288 aa7.96□□□□□ -1.14
TRIM42-201ENST00000286349 PPTC7Q8NI37 304 aa7.96□□□□□ -1.14
TRIM42-201ENST00000286349 GIPC2Q8TF65 315 aa7.96□□□□□ -1.14
TRIM42-201ENST00000286349 AFG1LQ8WV93 481 aa7.96□□□□□ -1.14
TRIM42-201ENST00000286349 CASKIN2Q8WXE0 1202 aa7.96□□□□□ -1.14
TRIM42-201ENST00000286349 IFT81Q8WYA0 676 aa7.96□□□□□ -1.14
TRIM42-201ENST00000286349 MAML1Q92585 1016 aa7.96□□□□□ -1.14
TRIM42-201ENST00000286349 CD101Q93033 1021 aa7.96□□□□□ -1.14
TRIM42-201ENST00000286349 ZNF333Q96JL9 665 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms