RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 MON1BQ7L1V2 547 aa19.27■□□□□ 0.67
PDLIM3-201ENST00000284767 SAPCD2Q86UD0 394 aa19.27■□□□□ 0.67
PDLIM3-201ENST00000284767 FBF1Q8TES7 1133 aa19.27■□□□□ 0.67
PDLIM3-201ENST00000284767 ANKRD36BP1Q96IX9 119 aa19.27■□□□□ 0.67
PDLIM3-201ENST00000284767 ZNF570Q96NI8 536 aa19.27■□□□□ 0.67
PDLIM3-201ENST00000284767 SLC5A4Q9NY91 659 aa19.27■□□□□ 0.67
PDLIM3-201ENST00000284767 CNTN6Q9UQ52 1028 aa19.27■□□□□ 0.67
PDLIM3-201ENST00000284767 STK38LQ9Y2H1 464 aa19.27■□□□□ 0.67
PDLIM3-201ENST00000284767 UNC5CO95185 931 aa19.26■□□□□ 0.67
PDLIM3-201ENST00000284767 TNNC2P02585 160 aa19.26■□□□□ 0.67
PDLIM3-201ENST00000284767 ZNF865P0CJ78 1059 aaPredicted RBP19.26■□□□□ 0.67
PDLIM3-201ENST00000284767 ZNF132P52740 706 aa19.26■□□□□ 0.67
PDLIM3-201ENST00000284767 SNX1Q13596 522 aa19.26■□□□□ 0.67
PDLIM3-201ENST00000284767 ZKSCAN8Q15776 578 aaPredicted RBP19.26■□□□□ 0.67
PDLIM3-201ENST00000284767 SLC10A6Q3KNW5 377 aa19.26■□□□□ 0.67
PDLIM3-201ENST00000284767 TLK2Q86UE8 772 aa19.26■□□□□ 0.67
PDLIM3-201ENST00000284767 ZNF677Q86XU0 584 aa19.26■□□□□ 0.67
PDLIM3-201ENST00000284767 BBOF1Q8ND07 529 aa19.26■□□□□ 0.67
PDLIM3-201ENST00000284767 ZIC5Q96T25 663 aa19.26■□□□□ 0.67
PDLIM3-201ENST00000284767 CCDC77Q9BR77 488 aa19.26■□□□□ 0.67
PDLIM3-201ENST00000284767 TXLNGQ9NUQ3 528 aa19.26■□□□□ 0.67
PDLIM3-201ENST00000284767 ANAPC5Q9UJX4 755 aa19.26■□□□□ 0.67
PDLIM3-201ENST00000284767 COL1A2P08123 1366 aa19.26■□□□□ 0.67
PDLIM3-201ENST00000284767 ITGB3P05106 788 aa19.26■□□□□ 0.67
PDLIM3-201ENST00000284767 ATP2A2P16615 1042 aaKnown RBP19.26■□□□□ 0.67
PDLIM3-201ENST00000284767 ZNF200P98182 395 aaPredicted RBP19.26■□□□□ 0.67
PDLIM3-201ENST00000284767 LMNB2Q03252 620 aa19.26■□□□□ 0.67
PDLIM3-201ENST00000284767 FAM187BQ17R55 369 aa19.26■□□□□ 0.67
PDLIM3-201ENST00000284767 RELL1Q8IUW5 271 aa19.26■□□□□ 0.67
PDLIM3-201ENST00000284767 KIRREL3Q8IZU9 778 aa19.26■□□□□ 0.67
PDLIM3-201ENST00000284767 TFAP2BQ92481 460 aa19.26■□□□□ 0.67
PDLIM3-201ENST00000284767 CHST7Q9NS84 486 aa19.26■□□□□ 0.67
PDLIM3-201ENST00000284767 ADAM22Q9P0K1 906 aa19.26■□□□□ 0.67
PDLIM3-201ENST00000284767 HTTP42858 3142 aa19.25■□□□□ 0.67
PDLIM3-201ENST00000284767 A8MUI8 341 aa19.25■□□□□ 0.67
PDLIM3-201ENST00000284767 ATP5HO75947 161 aa19.25■□□□□ 0.67
PDLIM3-201ENST00000284767 NEBLO76041 1014 aa19.25■□□□□ 0.67
PDLIM3-201ENST00000284767 SMIM10L2AP0DMW4 78 aa19.25■□□□□ 0.67
PDLIM3-201ENST00000284767 SMIM10L2BP0DMW5 78 aa19.25■□□□□ 0.67
PDLIM3-201ENST00000284767 STAT4Q14765 748 aa19.25■□□□□ 0.67
PDLIM3-201ENST00000284767 WDR72Q3MJ13 1102 aa19.25■□□□□ 0.67
PDLIM3-201ENST00000284767 IFNLR1Q8IU57 520 aaPredicted RBP19.25■□□□□ 0.67
PDLIM3-201ENST00000284767 RIBC1Q8N443 379 aaPredicted RBP19.25■□□□□ 0.67
PDLIM3-201ENST00000284767 DCLK3Q9C098 648 aa19.25■□□□□ 0.67
PDLIM3-201ENST00000284767 ZSWIM8A7E2V4 1837 aa19.25■□□□□ 0.67
PDLIM3-201ENST00000284767 A6NJR5 290 aa19.25■□□□□ 0.67
PDLIM3-201ENST00000284767 LIN7AO14910 233 aaPredicted RBP19.25■□□□□ 0.67
PDLIM3-201ENST00000284767 CTGFP29279 349 aa19.25■□□□□ 0.67
PDLIM3-201ENST00000284767 IL9RQ01113 521 aa19.25■□□□□ 0.67
PDLIM3-201ENST00000284767 POU5F1BQ06416 359 aa19.25■□□□□ 0.67
PDLIM3-201ENST00000284767 MGAT5Q09328 741 aa19.25■□□□□ 0.67
PDLIM3-201ENST00000284767 SURF1Q15526 300 aa19.25■□□□□ 0.67
PDLIM3-201ENST00000284767 ERICH1Q86X53 443 aa19.25■□□□□ 0.67
PDLIM3-201ENST00000284767 ECHDC2Q86YB7 292 aa19.25■□□□□ 0.67
PDLIM3-201ENST00000284767 ATL2Q8NHH9 583 aa19.25■□□□□ 0.67
PDLIM3-201ENST00000284767 NAALADL1Q9UQQ1 740 aa19.25■□□□□ 0.67
PDLIM3-201ENST00000284767 CCDC189A1A4V9 331 aa19.24■□□□□ 0.67
PDLIM3-201ENST00000284767 MCF2P10911 925 aa19.24■□□□□ 0.67
PDLIM3-201ENST00000284767 TAC1P20366 129 aa19.24■□□□□ 0.67
PDLIM3-201ENST00000284767 C17orf99Q6UX52 265 aa19.24■□□□□ 0.67
PDLIM3-201ENST00000284767 CYP4X1Q8N118 509 aa19.24■□□□□ 0.67
PDLIM3-201ENST00000284767 OSMRQ99650 979 aa19.24■□□□□ 0.67
PDLIM3-201ENST00000284767 PITPNM3Q9BZ71 974 aa19.24■□□□□ 0.67
PDLIM3-201ENST00000284767 SDCBP2Q9H190 292 aa19.24■□□□□ 0.67
PDLIM3-201ENST00000284767 ADCY8P40145 1251 aa19.24■□□□□ 0.67
PDLIM3-201ENST00000284767 SLC1A1P43005 524 aa19.24■□□□□ 0.67
PDLIM3-201ENST00000284767 PARP6Q2NL67 630 aa19.24■□□□□ 0.67
PDLIM3-201ENST00000284767 RGMBQ6NW40 437 aa19.24■□□□□ 0.67
PDLIM3-201ENST00000284767 CEP128Q6ZU80 1094 aa19.24■□□□□ 0.67
PDLIM3-201ENST00000284767 IFNL1Q8IU54 200 aa19.24■□□□□ 0.67
PDLIM3-201ENST00000284767 SRRM1Q8IYB3 904 aaKnown RBP19.24■□□□□ 0.67
PDLIM3-201ENST00000284767 EURLQ9NYK6 297 aa19.24■□□□□ 0.67
PDLIM3-201ENST00000284767 HMGXB4Q9UGU5 601 aa19.24■□□□□ 0.67
PDLIM3-201ENST00000284767 HES2Q9Y543 173 aa19.24■□□□□ 0.67
PDLIM3-201ENST00000284767 CXorf38Q8TB03 319 aa19.23■□□□□ 0.67
PDLIM3-201ENST00000284767 ATG4AQ8WYN0 398 aa19.23■□□□□ 0.67
PDLIM3-201ENST00000284767 SMYD3Q9H7B4 428 aa19.23■□□□□ 0.67
PDLIM3-201ENST00000284767 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.23■□□□□ 0.67
PDLIM3-201ENST00000284767 MANSC4A6NHS7 340 aaPredicted RBP19.23■□□□□ 0.67
PDLIM3-201ENST00000284767 FOXO6A8MYZ6 492 aa19.23■□□□□ 0.67
PDLIM3-201ENST00000284767 CLGNO14967 610 aa19.23■□□□□ 0.67
PDLIM3-201ENST00000284767 LUC7L3O95232 432 aaKnown RBP19.23■□□□□ 0.67
PDLIM3-201ENST00000284767 F2P00734 622 aa19.23■□□□□ 0.67
PDLIM3-201ENST00000284767 ABHD2P08910 425 aa19.23■□□□□ 0.67
PDLIM3-201ENST00000284767 PTP4A2Q12974 167 aa19.23■□□□□ 0.67
PDLIM3-201ENST00000284767 NR1H3Q13133 447 aa19.23■□□□□ 0.67
PDLIM3-201ENST00000284767 ANKLE1Q8NAG6 615 aa19.23■□□□□ 0.67
PDLIM3-201ENST00000284767 ADAMTS10Q9H324 1103 aa19.23■□□□□ 0.67
PDLIM3-201ENST00000284767 ETNK1Q9HBU6 452 aa19.23■□□□□ 0.67
PDLIM3-201ENST00000284767 TRIM33Q9UPN9 1127 aa19.23■□□□□ 0.67
PDLIM3-201ENST00000284767 STARD13Q9Y3M8 1113 aa19.23■□□□□ 0.67
PDLIM3-201ENST00000284767 TRIP12Q14669 1992 aaPredicted RBP19.22■□□□□ 0.67
PDLIM3-201ENST00000284767 FAM47DPA6NHR8 397 aa19.22■□□□□ 0.67
PDLIM3-201ENST00000284767 IL18RAPO95256 599 aa19.22■□□□□ 0.67
PDLIM3-201ENST00000284767 SETDB1Q15047 1291 aa19.22■□□□□ 0.67
PDLIM3-201ENST00000284767 ANKRD20A2Q5SQ80 823 aa19.22■□□□□ 0.67
PDLIM3-201ENST00000284767 ANKRD20A1Q5TYW2 823 aa19.22■□□□□ 0.67
PDLIM3-201ENST00000284767 ANKRD20A3Q5VUR7 823 aa19.22■□□□□ 0.67
PDLIM3-201ENST00000284767 TWNKQ96RR1 684 aa19.22■□□□□ 0.67
PDLIM3-201ENST00000284767 FOXP3Q9BZS1 431 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms