RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 B3GALNT2Q8NCR0 500 aa12.78□□□□□ -0.36
SDE2-201ENST00000272091 SLC2A14Q8TDB8 520 aa12.78□□□□□ -0.36
SDE2-201ENST00000272091 FNIP1Q8TF40 1166 aa12.78□□□□□ -0.36
SDE2-201ENST00000272091 RTP3Q9BQQ7 232 aa12.78□□□□□ -0.36
SDE2-201ENST00000272091 ST7Q9NRC1 585 aa12.78□□□□□ -0.36
SDE2-201ENST00000272091 PHF2O75151 1096 aa12.77□□□□□ -0.36
SDE2-201ENST00000272091 LRCH4O75427 683 aa12.77□□□□□ -0.36
SDE2-201ENST00000272091 PLA2G4AP47712 749 aa12.77□□□□□ -0.36
SDE2-201ENST00000272091 CDR1P51861 262 aa12.77□□□□□ -0.36
SDE2-201ENST00000272091 FAM189BP81408 668 aa12.77□□□□□ -0.36
SDE2-201ENST00000272091 ADCY2Q08462 1091 aa12.77□□□□□ -0.36
SDE2-201ENST00000272091 PIGHQ14442 188 aaPredicted RBP12.77□□□□□ -0.36
SDE2-201ENST00000272091 ACSF2Q96CM8 615 aaPredicted RBP12.77□□□□□ -0.36
SDE2-201ENST00000272091 DEFB118Q96PH6 123 aa12.77□□□□□ -0.36
SDE2-201ENST00000272091 NAP1L3Q99457 506 aaPredicted RBP12.77□□□□□ -0.36
SDE2-201ENST00000272091 TRIM51Q9BSJ1 452 aa12.77□□□□□ -0.36
SDE2-201ENST00000272091 CRTAC1Q9NQ79 661 aa12.77□□□□□ -0.36
SDE2-201ENST00000272091 OGDHLQ9ULD0 1010 aa12.77□□□□□ -0.36
SDE2-201ENST00000272091 TIMM13Q9Y5L4 95 aaPredicted RBP12.77□□□□□ -0.36
SDE2-201ENST00000272091 I3L4J1 428 aa12.77□□□□□ -0.37
SDE2-201ENST00000272091 PAPSS1O43252 624 aaPredicted RBP12.77□□□□□ -0.37
SDE2-201ENST00000272091 ERLIN1O75477 346 aa12.77□□□□□ -0.37
SDE2-201ENST00000272091 ITGB1P05556 798 aa12.77□□□□□ -0.37
SDE2-201ENST00000272091 SH3PXD2AQ5TCZ1 1133 aa12.77□□□□□ -0.37
SDE2-201ENST00000272091 CCDC70Q6NSX1 233 aa12.77□□□□□ -0.37
SDE2-201ENST00000272091 CYP4V2Q6ZWL3 525 aaPredicted RBP12.77□□□□□ -0.37
SDE2-201ENST00000272091 LRRC8DQ7L1W4 858 aa12.77□□□□□ -0.37
SDE2-201ENST00000272091 FUKQ8N0W3 1084 aa12.77□□□□□ -0.37
SDE2-201ENST00000272091 ANKRD52Q8NB46 1076 aa12.77□□□□□ -0.37
SDE2-201ENST00000272091 CLEC4CQ8WTT0 213 aa12.77□□□□□ -0.37
SDE2-201ENST00000272091 SEC14L1Q92503 715 aa12.77□□□□□ -0.37
SDE2-201ENST00000272091 B3GNT5Q9BYG0 378 aa12.77□□□□□ -0.37
SDE2-201ENST00000272091 SYNCQ9H7C4 482 aa12.77□□□□□ -0.37
SDE2-201ENST00000272091 C3orf70A6NLC5 250 aaPredicted RBP12.77□□□□□ -0.37
SDE2-201ENST00000272091 CLDN5O00501 218 aa12.77□□□□□ -0.37
SDE2-201ENST00000272091 BEST1O76090 585 aa12.77□□□□□ -0.37
SDE2-201ENST00000272091 SETSIPP0DME0 302 aa12.77□□□□□ -0.37
SDE2-201ENST00000272091 GJC1P36383 396 aa12.77□□□□□ -0.37
SDE2-201ENST00000272091 GRIK3Q13003 919 aa12.77□□□□□ -0.37
SDE2-201ENST00000272091 FAM102AQ5T9C2 384 aaPredicted RBP12.77□□□□□ -0.37
SDE2-201ENST00000272091 C12orf50Q8NA57 414 aaPredicted RBP12.77□□□□□ -0.37
SDE2-201ENST00000272091 GDAP1L1Q96MZ0 367 aa12.77□□□□□ -0.37
SDE2-201ENST00000272091 NEUROG2Q9H2A3 272 aa12.77□□□□□ -0.37
SDE2-201ENST00000272091 R3HDM2Q9Y2K5 976 aaKnown RBP12.77□□□□□ -0.37
SDE2-201ENST00000272091 PTPRDP23468 1912 aa12.77□□□□□ -0.37
SDE2-201ENST00000272091 C2CD4BA6NLJ0 364 aa12.76□□□□□ -0.37
SDE2-201ENST00000272091 FAM163BP0C2L3 166 aa12.76□□□□□ -0.37
SDE2-201ENST00000272091 FAM153BP0C7A2 387 aa12.76□□□□□ -0.37
SDE2-201ENST00000272091 MCM3P25205 808 aa12.76□□□□□ -0.37
SDE2-201ENST00000272091 PSMA2P25787 234 aa12.76□□□□□ -0.37
SDE2-201ENST00000272091 RPL9P32969 192 aaKnown RBP12.76□□□□□ -0.37
SDE2-201ENST00000272091 FLT3P36888 993 aa12.76□□□□□ -0.37
SDE2-201ENST00000272091 FAM153CQ494X1 144 aa12.76□□□□□ -0.37
SDE2-201ENST00000272091 DDX42Q86XP3 938 aaKnown RBP eCLIP12.76□□□□□ -0.37
SDE2-201ENST00000272091 EXD1Q8NHP7 514 aa12.76□□□□□ -0.37
SDE2-201ENST00000272091 SLITRK1Q96PX8 696 aa12.76□□□□□ -0.37
SDE2-201ENST00000272091 FAM153AQ9UHL3 310 aa12.76□□□□□ -0.37
SDE2-201ENST00000272091 INPP5FQ9Y2H2 1132 aa12.76□□□□□ -0.37
SDE2-201ENST00000272091 SPDYE4A6NLX3 237 aa12.76□□□□□ -0.37
SDE2-201ENST00000272091 RALAP11233 206 aa12.76□□□□□ -0.37
SDE2-201ENST00000272091 CCL5P13501 91 aa12.76□□□□□ -0.37
SDE2-201ENST00000272091 BST2Q10589 180 aaKnown RBP12.76□□□□□ -0.37
SDE2-201ENST00000272091 CLUL1Q15846 466 aa12.76□□□□□ -0.37
SDE2-201ENST00000272091 LRRC38Q5VT99 294 aa12.76□□□□□ -0.37
SDE2-201ENST00000272091 OR6B2Q6IFH4 312 aa12.76□□□□□ -0.37
SDE2-201ENST00000272091 STK32AQ8WU08 396 aa12.76□□□□□ -0.37
SDE2-201ENST00000272091 PGBD4Q96DM1 585 aa12.76□□□□□ -0.37
SDE2-201ENST00000272091 ADAM33Q9BZ11 813 aa12.76□□□□□ -0.37
SDE2-201ENST00000272091 TMEM30AQ9NV96 361 aa12.76□□□□□ -0.37
SDE2-201ENST00000272091 TET1Q8NFU7 2136 aa12.76□□□□□ -0.37
SDE2-201ENST00000272091 PATJQ8NI35 1801 aa12.76□□□□□ -0.37
SDE2-201ENST00000272091 PI4K2BG5E9Z4 385 aa12.76□□□□□ -0.37
SDE2-201ENST00000272091 ATP8B1O43520 1251 aa12.76□□□□□ -0.37
SDE2-201ENST00000272091 SELPP16109 830 aa12.76□□□□□ -0.37
SDE2-201ENST00000272091 PTPN1P18031 435 aaKnown RBP12.76□□□□□ -0.37
SDE2-201ENST00000272091 BRCC3P46736 316 aa12.76□□□□□ -0.37
SDE2-201ENST00000272091 PAN2Q504Q3 1202 aaKnown RBP12.76□□□□□ -0.37
SDE2-201ENST00000272091 SCUBE3Q8IX30 993 aa12.76□□□□□ -0.37
SDE2-201ENST00000272091 RAPGEF5Q92565 580 aa12.76□□□□□ -0.37
SDE2-201ENST00000272091 PEBP4Q96S96 227 aa12.76□□□□□ -0.37
SDE2-201ENST00000272091 HNRNPABQ99729 332 aaKnown RBP12.76□□□□□ -0.37
SDE2-201ENST00000272091 DDX43Q9NXZ2 648 aaKnown RBP12.76□□□□□ -0.37
SDE2-201ENST00000272091 LCMT1Q9UIC8 334 aa12.76□□□□□ -0.37
SDE2-201ENST00000272091 NFU1Q9UMS0 254 aa12.76□□□□□ -0.37
SDE2-201ENST00000272091 GRAP2O75791 330 aa12.75□□□□□ -0.37
SDE2-201ENST00000272091 HSPA6P17066 643 aa12.75□□□□□ -0.37
SDE2-201ENST00000272091 BCAT1P54687 386 aa12.75□□□□□ -0.37
SDE2-201ENST00000272091 CASP8Q14790 479 aa12.75□□□□□ -0.37
SDE2-201ENST00000272091 IPO4Q8TEX9 1081 aaKnown RBP12.75□□□□□ -0.37
SDE2-201ENST00000272091 UBXN6Q9BZV1 441 aa12.75□□□□□ -0.37
SDE2-201ENST00000272091 CHST7Q9NS84 486 aa12.75□□□□□ -0.37
SDE2-201ENST00000272091 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.75□□□□□ -0.37
SDE2-201ENST00000272091 PCYOX1Q9UHG3 505 aa12.75□□□□□ -0.37
SDE2-201ENST00000272091 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.75□□□□□ -0.37
SDE2-201ENST00000272091 DDHD2O94830 711 aa12.75□□□□□ -0.37
SDE2-201ENST00000272091 TUSC3Q13454 348 aa12.75□□□□□ -0.37
SDE2-201ENST00000272091 MFSD7Q6UXD7 560 aa12.75□□□□□ -0.37
SDE2-201ENST00000272091 SLC24A5Q71RS6 500 aa12.75□□□□□ -0.37
SDE2-201ENST00000272091 ZNF280BQ86YH2 543 aa12.75□□□□□ -0.37
SDE2-201ENST00000272091 IFT20Q8IY31 132 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms