RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 RNF135Q8IUD6 432 aa26.15■■□□□ 1.78
SSBP4-201ENST00000270061 HDAC7Q8WUI4 952 aa26.15■■□□□ 1.78
SSBP4-201ENST00000270061 NOX5Q96PH1 765 aa26.15■■□□□ 1.78
SSBP4-201ENST00000270061 TSPAN18Q96SJ8 248 aa26.15■■□□□ 1.78
SSBP4-201ENST00000270061 CLSTN3Q9BQT9 956 aa26.15■■□□□ 1.78
SSBP4-201ENST00000270061 PACSIN1Q9BY11 444 aa26.15■■□□□ 1.78
SSBP4-201ENST00000270061 PLEKHA4Q9H4M7 779 aa26.15■■□□□ 1.78
SSBP4-201ENST00000270061 SALL4Q9UJQ4 1053 aa26.15■■□□□ 1.78
SSBP4-201ENST00000270061 UBQLN1Q9UMX0 589 aaKnown RBP26.15■■□□□ 1.78
SSBP4-201ENST00000270061 XPOTO43592 962 aaKnown RBP26.14■■□□□ 1.78
SSBP4-201ENST00000270061 TKTP29401 623 aaKnown RBP26.14■■□□□ 1.78
SSBP4-201ENST00000270061 TFAMQ00059 246 aaKnown RBP26.14■■□□□ 1.78
SSBP4-201ENST00000270061 GPR149Q86SP6 731 aa26.14■■□□□ 1.78
SSBP4-201ENST00000270061 CD302Q8IX05 232 aa26.14■■□□□ 1.78
SSBP4-201ENST00000270061 CNTN6Q9UQ52 1028 aa26.14■■□□□ 1.78
SSBP4-201ENST00000270061 NR2E1Q9Y466 385 aa26.14■■□□□ 1.78
SSBP4-201ENST00000270061 DCXO43602 365 aa26.13■■□□□ 1.77
SSBP4-201ENST00000270061 ZBTB6Q15916 424 aa26.13■■□□□ 1.77
SSBP4-201ENST00000270061 SPOPLQ6IQ16 392 aa26.13■■□□□ 1.77
SSBP4-201ENST00000270061 LILRA6Q6PI73 481 aa26.13■■□□□ 1.77
SSBP4-201ENST00000270061 NT5DC4Q86YG4 428 aa26.13■■□□□ 1.77
SSBP4-201ENST00000270061 ALS2CR12Q96Q35 445 aa26.13■■□□□ 1.77
SSBP4-201ENST00000270061 A0A0A6YYK5 440 aaPredicted RBP26.12■■□□□ 1.77
SSBP4-201ENST00000270061 MOCS3O95396 460 aa26.12■■□□□ 1.77
SSBP4-201ENST00000270061 CYP11B1P15538 503 aa26.12■■□□□ 1.77
SSBP4-201ENST00000270061 CYP3A5P20815 502 aa26.12■■□□□ 1.77
SSBP4-201ENST00000270061 ACO1P21399 889 aaKnown RBP26.12■■□□□ 1.77
SSBP4-201ENST00000270061 SP100P23497 879 aaPredicted RBP26.12■■□□□ 1.77
SSBP4-201ENST00000270061 BPIFB4P59827 614 aa26.12■■□□□ 1.77
SSBP4-201ENST00000270061 PAPD7Q5XG87 772 aaKnown RBP26.12■■□□□ 1.77
SSBP4-201ENST00000270061 ANKS3Q6ZW76 656 aa26.12■■□□□ 1.77
SSBP4-201ENST00000270061 NOP9Q86U38 636 aaKnown RBP26.12■■□□□ 1.77
SSBP4-201ENST00000270061 SLC47A2Q86VL8 602 aa26.12■■□□□ 1.77
SSBP4-201ENST00000270061 CMASQ8NFW8 434 aaPredicted RBP26.12■■□□□ 1.77
SSBP4-201ENST00000270061 SLC20A1Q8WUM9 679 aa26.12■■□□□ 1.77
SSBP4-201ENST00000270061 TAF4BQ92750 862 aa26.12■■□□□ 1.77
SSBP4-201ENST00000270061 FAXDC2Q96IV6 333 aa26.12■■□□□ 1.77
SSBP4-201ENST00000270061 CDC23Q9UJX2 597 aa26.12■■□□□ 1.77
SSBP4-201ENST00000270061 JRKLQ9Y4A0 524 aa26.12■■□□□ 1.77
SSBP4-201ENST00000270061 CAPN6Q9Y6Q1 641 aa26.12■■□□□ 1.77
SSBP4-201ENST00000270061 DOCK6Q96HP0 2047 aa26.12■■□□□ 1.77
SSBP4-201ENST00000270061 CCDC195A0A1B0GUA6 201 aa26.12■■□□□ 1.77
SSBP4-201ENST00000270061 GZMAP12544 262 aa26.12■■□□□ 1.77
SSBP4-201ENST00000270061 CHRNB2P17787 502 aa26.12■■□□□ 1.77
SSBP4-201ENST00000270061 AMPD2Q01433 879 aa26.12■■□□□ 1.77
SSBP4-201ENST00000270061 TRPC3Q13507 836 aa26.12■■□□□ 1.77
SSBP4-201ENST00000270061 KREMEN2Q8NCW0 462 aa26.12■■□□□ 1.77
SSBP4-201ENST00000270061 FEZF2Q8TBJ5 459 aa26.12■■□□□ 1.77
SSBP4-201ENST00000270061 ELMO3Q96BJ8 720 aa26.12■■□□□ 1.77
SSBP4-201ENST00000270061 MTRRQ9UBK8 725 aa26.12■■□□□ 1.77
SSBP4-201ENST00000270061 LRPAP1P30533 357 aa26.11■■□□□ 1.77
SSBP4-201ENST00000270061 PDE6CP51160 858 aa26.11■■□□□ 1.77
SSBP4-201ENST00000270061 CDR2Q01850 454 aa26.11■■□□□ 1.77
SSBP4-201ENST00000270061 DDX1Q92499 740 aaKnown RBP26.11■■□□□ 1.77
SSBP4-201ENST00000270061 ARID3AQ99856 593 aa26.11■■□□□ 1.77
SSBP4-201ENST00000270061 MUTYHQ9UIF7 546 aa26.11■■□□□ 1.77
SSBP4-201ENST00000270061 C2CD2Q9Y426 696 aa26.11■■□□□ 1.77
SSBP4-201ENST00000270061 SYN3O14994 580 aa26.1■■□□□ 1.77
SSBP4-201ENST00000270061 RFPL2O75678 378 aa26.1■■□□□ 1.77
SSBP4-201ENST00000270061 TMEM253P0C7T8 217 aa26.1■■□□□ 1.77
SSBP4-201ENST00000270061 OR1D2P34982 312 aa26.1■■□□□ 1.77
SSBP4-201ENST00000270061 GALCP54803 685 aa26.1■■□□□ 1.77
SSBP4-201ENST00000270061 MYL6P60660 151 aa26.1■■□□□ 1.77
SSBP4-201ENST00000270061 JADE1Q6IE81 842 aa26.1■■□□□ 1.77
SSBP4-201ENST00000270061 ZNF677Q86XU0 584 aa26.1■■□□□ 1.77
SSBP4-201ENST00000270061 SUSD3Q96L08 255 aa26.1■■□□□ 1.77
SSBP4-201ENST00000270061 ISCUQ9H1K1 167 aa26.1■■□□□ 1.77
SSBP4-201ENST00000270061 DYNC1I1O14576 645 aa26.1■■□□□ 1.77
SSBP4-201ENST00000270061 ADAM12O43184 909 aa26.1■■□□□ 1.77
SSBP4-201ENST00000270061 NFICP08651 508 aa26.1■■□□□ 1.77
SSBP4-201ENST00000270061 KRT5P13647 590 aa26.1■■□□□ 1.77
SSBP4-201ENST00000270061 IFI16Q16666 785 aaKnown RBP26.1■■□□□ 1.77
SSBP4-201ENST00000270061 UBR7Q8N806 425 aa26.1■■□□□ 1.77
SSBP4-201ENST00000270061 BEST2Q8NFU1 509 aa26.1■■□□□ 1.77
SSBP4-201ENST00000270061 XYLT2Q9H1B5 865 aa26.1■■□□□ 1.77
SSBP4-201ENST00000270061 BACE2Q9Y5Z0 518 aa26.1■■□□□ 1.77
SSBP4-201ENST00000270061 CDY1Q9Y6F8 540 aa26.1■■□□□ 1.77
SSBP4-201ENST00000270061 SCN1AP35498 2009 aa26.1■■□□□ 1.77
SSBP4-201ENST00000270061 ANKRD62A6NC57 917 aa26.09■■□□□ 1.77
SSBP4-201ENST00000270061 FMO1Q01740 532 aa26.09■■□□□ 1.77
SSBP4-201ENST00000270061 TMEM132DQ14C87 1099 aa26.09■■□□□ 1.77
SSBP4-201ENST00000270061 VARS2Q5ST30 1063 aaKnown RBP26.09■■□□□ 1.77
SSBP4-201ENST00000270061 SCARA3Q6AZY7 606 aa26.09■■□□□ 1.77
SSBP4-201ENST00000270061 TMEM130Q8N3G9 435 aa26.09■■□□□ 1.77
SSBP4-201ENST00000270061 ZDHHC7Q9NXF8 308 aa26.09■■□□□ 1.77
SSBP4-201ENST00000270061 FBXW11Q9UKB1 542 aa26.09■■□□□ 1.77
SSBP4-201ENST00000270061 DERAQ9Y315 318 aa26.09■■□□□ 1.77
SSBP4-201ENST00000270061 ATP1A1P05023 1023 aaKnown RBP26.08■■□□□ 1.77
SSBP4-201ENST00000270061 GUCY2FP51841 1108 aa26.08■■□□□ 1.77
SSBP4-201ENST00000270061 RAB33AQ14088 237 aa26.08■■□□□ 1.77
SSBP4-201ENST00000270061 CCDC149Q6ZUS6 474 aa26.08■■□□□ 1.77
SSBP4-201ENST00000270061 C1orf127Q8N9H9 656 aa26.08■■□□□ 1.77
SSBP4-201ENST00000270061 PCDHB18PQ96TA0 734 aa26.08■■□□□ 1.77
SSBP4-201ENST00000270061 RHOBTB2Q9BYZ6 727 aa26.08■■□□□ 1.77
SSBP4-201ENST00000270061 NIF3L1Q9GZT8 377 aa26.08■■□□□ 1.77
SSBP4-201ENST00000270061 SEPT11Q9NVA2 429 aaKnown RBP26.08■■□□□ 1.77
SSBP4-201ENST00000270061 SIX4Q9UIU6 781 aa26.08■■□□□ 1.77
SSBP4-201ENST00000270061 BUB1O43683 1085 aa26.07■■□□□ 1.76
SSBP4-201ENST00000270061 RTN2O75298 545 aa26.07■■□□□ 1.76
SSBP4-201ENST00000270061 LIN9Q5TKA1 542 aa26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms