RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 RTP1P59025 263 aa12.06□□□□□ -0.48
CLSTN3-201ENST00000266546 MFSD14CQ5VZR4 134 aa12.06□□□□□ -0.48
CLSTN3-201ENST00000266546 MFN1Q8IWA4 741 aa12.06□□□□□ -0.48
CLSTN3-201ENST00000266546 THNSL1Q8IYQ7 743 aa12.06□□□□□ -0.48
CLSTN3-201ENST00000266546 RCOR2Q8IZ40 523 aa12.06□□□□□ -0.48
CLSTN3-201ENST00000266546 CRYGNQ8WXF5 182 aa12.06□□□□□ -0.48
CLSTN3-201ENST00000266546 SMYD2Q9NRG4 433 aa12.06□□□□□ -0.48
CLSTN3-201ENST00000266546 AGO2Q9UKV8 859 aaKnown RBP12.06□□□□□ -0.48
CLSTN3-201ENST00000266546 A6NJR5 290 aa12.06□□□□□ -0.48
CLSTN3-201ENST00000266546 ZBTB39O15060 712 aa12.06□□□□□ -0.48
CLSTN3-201ENST00000266546 PRPSAP2O60256 369 aa12.06□□□□□ -0.48
CLSTN3-201ENST00000266546 MGRN1O60291 552 aa12.06□□□□□ -0.48
CLSTN3-201ENST00000266546 GZMAP12544 262 aa12.06□□□□□ -0.48
CLSTN3-201ENST00000266546 YBX3P16989 372 aaKnown RBP eCLIP12.06□□□□□ -0.48
CLSTN3-201ENST00000266546 HOXD10P28358 340 aa12.06□□□□□ -0.48
CLSTN3-201ENST00000266546 SSTR3P32745 418 aaPredicted RBP12.06□□□□□ -0.48
CLSTN3-201ENST00000266546 DRG2P55039 364 aaKnown RBP12.06□□□□□ -0.48
CLSTN3-201ENST00000266546 SPIRE1Q08AE8 756 aa12.06□□□□□ -0.48
CLSTN3-201ENST00000266546 TFDP2Q14188 446 aa12.06□□□□□ -0.48
CLSTN3-201ENST00000266546 RAPH1Q70E73 1250 aa12.06□□□□□ -0.48
CLSTN3-201ENST00000266546 ZNF572Q7Z3I7 529 aaPredicted RBP12.06□□□□□ -0.48
CLSTN3-201ENST00000266546 PCSK1NQ9UHG2 260 aa12.06□□□□□ -0.48
CLSTN3-201ENST00000266546 PGAP2Q9UHJ9 254 aa12.06□□□□□ -0.48
CLSTN3-201ENST00000266546 SCN9AQ15858 1988 aa12.06□□□□□ -0.48
CLSTN3-201ENST00000266546 TLR2O60603 784 aa12.05□□□□□ -0.48
CLSTN3-201ENST00000266546 CRCPO75575 148 aa12.05□□□□□ -0.48
CLSTN3-201ENST00000266546 PGK2P07205 417 aa12.05□□□□□ -0.48
CLSTN3-201ENST00000266546 KRT7P08729 469 aa12.05□□□□□ -0.48
CLSTN3-201ENST00000266546 RARAP10276 462 aa12.05□□□□□ -0.48
CLSTN3-201ENST00000266546 GEMIN4P57678 1058 aaKnown RBP12.05□□□□□ -0.48
CLSTN3-201ENST00000266546 DSG1Q02413 1049 aa12.05□□□□□ -0.48
CLSTN3-201ENST00000266546 RPS6KA2Q15349 733 aa12.05□□□□□ -0.48
CLSTN3-201ENST00000266546 CNGA3Q16281 694 aa12.05□□□□□ -0.48
CLSTN3-201ENST00000266546 ARHGEF26Q96DR7 871 aa12.05□□□□□ -0.48
CLSTN3-201ENST00000266546 GANQ9H2C0 597 aa12.05□□□□□ -0.48
CLSTN3-201ENST00000266546 GPRC5CQ9NQ84 441 aa12.05□□□□□ -0.48
CLSTN3-201ENST00000266546 ETAA1Q9NY74 926 aa12.05□□□□□ -0.48
CLSTN3-201ENST00000266546 TTLL3Q9Y4R7 772 aa12.05□□□□□ -0.48
CLSTN3-201ENST00000266546 LTBP1Q14766 1721 aa12.05□□□□□ -0.48
CLSTN3-201ENST00000266546 GOLGA8QA0A0J9YX86 632 aa12.05□□□□□ -0.48
CLSTN3-201ENST00000266546 GOLGA8OA6NCC3 632 aa12.05□□□□□ -0.48
CLSTN3-201ENST00000266546 RRN3P2A6NIE6 340 aa12.05□□□□□ -0.48
CLSTN3-201ENST00000266546 GOLGA8NF8WBI6 632 aa12.05□□□□□ -0.48
CLSTN3-201ENST00000266546 SGPL1O95470 568 aa12.05□□□□□ -0.48
CLSTN3-201ENST00000266546 NPTX2P47972 431 aa12.05□□□□□ -0.48
CLSTN3-201ENST00000266546 PHEXP78562 749 aa12.05□□□□□ -0.48
CLSTN3-201ENST00000266546 MTFR1Q15390 333 aa12.05□□□□□ -0.48
CLSTN3-201ENST00000266546 EPC2Q52LR7 807 aa12.05□□□□□ -0.48
CLSTN3-201ENST00000266546 RARS2Q5T160 578 aaKnown RBP12.05□□□□□ -0.48
CLSTN3-201ENST00000266546 MOB2Q70IA6 237 aa12.05□□□□□ -0.48
CLSTN3-201ENST00000266546 NEUROG2Q9H2A3 272 aa12.05□□□□□ -0.48
CLSTN3-201ENST00000266546 DDX56Q9NY93 547 aaKnown RBP12.05□□□□□ -0.48
CLSTN3-201ENST00000266546 ALDH1A1P00352 501 aa12.05□□□□□ -0.48
CLSTN3-201ENST00000266546 RGS2P41220 211 aa12.05□□□□□ -0.48
CLSTN3-201ENST00000266546 PTK7Q13308 1070 aa12.05□□□□□ -0.48
CLSTN3-201ENST00000266546 NFIL3Q16649 462 aa12.05□□□□□ -0.48
CLSTN3-201ENST00000266546 ARSHQ5FYA8 562 aa12.05□□□□□ -0.48
CLSTN3-201ENST00000266546 IRGCQ6NXR0 463 aa12.05□□□□□ -0.48
CLSTN3-201ENST00000266546 SCARA5Q6ZMJ2 495 aa12.05□□□□□ -0.48
CLSTN3-201ENST00000266546 KRT35Q92764 455 aa12.05□□□□□ -0.48
CLSTN3-201ENST00000266546 KIFC3Q9BVG8 833 aa12.05□□□□□ -0.48
CLSTN3-201ENST00000266546 KATNAL1Q9BW62 490 aa12.05□□□□□ -0.48
CLSTN3-201ENST00000266546 CTNNAL1Q9UBT7 734 aa12.05□□□□□ -0.48
CLSTN3-201ENST00000266546 TRIM33Q9UPN9 1127 aa12.05□□□□□ -0.48
CLSTN3-201ENST00000266546 MED7O43513 233 aa12.04□□□□□ -0.48
CLSTN3-201ENST00000266546 EXOC3L1Q86VI1 746 aa12.04□□□□□ -0.48
CLSTN3-201ENST00000266546 ARID3BQ8IVW6 561 aaPredicted RBP12.04□□□□□ -0.48
CLSTN3-201ENST00000266546 GABPB2Q8TAK5 448 aaPredicted RBP12.04□□□□□ -0.48
CLSTN3-201ENST00000266546 HES6Q96HZ4 224 aa12.04□□□□□ -0.48
CLSTN3-201ENST00000266546 ABHD16BQ9H3Z7 469 aa12.04□□□□□ -0.48
CLSTN3-201ENST00000266546 RPF1Q9H9Y2 349 aaKnown RBP12.04□□□□□ -0.48
CLSTN3-201ENST00000266546 HESX1Q9UBX0 185 aa12.04□□□□□ -0.48
CLSTN3-201ENST00000266546 ADAMTS5Q9UNA0 930 aa12.04□□□□□ -0.48
CLSTN3-201ENST00000266546 CHMP2BQ9UQN3 213 aa12.04□□□□□ -0.48
CLSTN3-201ENST00000266546 ZNF711Q9Y462 761 aa12.04□□□□□ -0.48
CLSTN3-201ENST00000266546 AHCYL1O43865 530 aa12.04□□□□□ -0.48
CLSTN3-201ENST00000266546 SNRNP35Q16560 246 aaKnown RBP12.04□□□□□ -0.48
CLSTN3-201ENST00000266546 OLFML2BQ68BL8 750 aa12.04□□□□□ -0.48
CLSTN3-201ENST00000266546 AADACL2Q6P093 401 aa12.04□□□□□ -0.48
CLSTN3-201ENST00000266546 SLC9A9Q8IVB4 645 aa12.04□□□□□ -0.48
CLSTN3-201ENST00000266546 ABRAQ8N0Z2 381 aa12.04□□□□□ -0.48
CLSTN3-201ENST00000266546 PRPF31Q8WWY3 499 aaKnown RBP12.04□□□□□ -0.48
CLSTN3-201ENST00000266546 INPP5DQ92835 1189 aa12.04□□□□□ -0.48
CLSTN3-201ENST00000266546 SLC12A6Q9UHW9 1150 aa12.04□□□□□ -0.48
CLSTN3-201ENST00000266546 C2CD2Q9Y426 696 aa12.04□□□□□ -0.48
CLSTN3-201ENST00000266546 HEY1Q9Y5J3 304 aa12.04□□□□□ -0.48
CLSTN3-201ENST00000266546 SLC15A5A6NIM6 579 aa12.04□□□□□ -0.48
CLSTN3-201ENST00000266546 UBA1P22314 1058 aaKnown RBP12.04□□□□□ -0.48
CLSTN3-201ENST00000266546 ZNF200P98182 395 aaPredicted RBP12.04□□□□□ -0.48
CLSTN3-201ENST00000266546 SLC34A1Q06495 639 aa12.04□□□□□ -0.48
CLSTN3-201ENST00000266546 DGKDQ16760 1214 aa12.04□□□□□ -0.48
CLSTN3-201ENST00000266546 ACAD10Q6JQN1 1059 aa12.04□□□□□ -0.48
CLSTN3-201ENST00000266546 ARMCX2Q7L311 632 aa12.04□□□□□ -0.48
CLSTN3-201ENST00000266546 IRF2BP2Q7Z5L9 587 aa12.04□□□□□ -0.48
CLSTN3-201ENST00000266546 RAET1EQ8TD07 263 aa12.04□□□□□ -0.48
CLSTN3-201ENST00000266546 TMEM143Q96AN5 459 aa12.04□□□□□ -0.48
CLSTN3-201ENST00000266546 DRC3Q9H069 523 aa12.04□□□□□ -0.48
CLSTN3-201ENST00000266546 BTBD7Q9P203 1132 aa12.04□□□□□ -0.48
CLSTN3-201ENST00000266546 PCDHB2Q9Y5E7 798 aa12.04□□□□□ -0.48
CLSTN3-201ENST00000266546 DNAJC6O75061 913 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms