RNA–Protein interactions for RNA: ENST00000265641.9

CPT1A-201, Transcript of carnitine palmitoyltransferase 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPT1A, Length 5,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-201ENST00000265641 MAFGO15525 162 aa11.11□□□□□ -0.63
CPT1A-201ENST00000265641 MAGEC1O60732 1142 aa11.11□□□□□ -0.63
CPT1A-201ENST00000265641 EFCAB14O75071 495 aa11.11□□□□□ -0.63
CPT1A-201ENST00000265641 SLC16A2P36021 539 aa11.11□□□□□ -0.63
CPT1A-201ENST00000265641 CASP5P51878 434 aa11.11□□□□□ -0.63
CPT1A-201ENST00000265641 SCARF1Q14162 830 aa11.11□□□□□ -0.63
CPT1A-201ENST00000265641 DMC1Q14565 340 aa11.11□□□□□ -0.63
CPT1A-201ENST00000265641 CAMK1DQ8IU85 385 aa11.11□□□□□ -0.63
CPT1A-201ENST00000265641 AGXT2Q9BYV1 514 aa11.11□□□□□ -0.63
CPT1A-201ENST00000265641 GOLPH3Q9H4A6 298 aa11.11□□□□□ -0.63
CPT1A-201ENST00000265641 CLK4Q9HAZ1 481 aaKnown RBP11.11□□□□□ -0.63
CPT1A-201ENST00000265641 PCMTD2Q9NV79 361 aa11.11□□□□□ -0.63
CPT1A-201ENST00000265641 MARCOQ9UEW3 520 aaPredicted RBP11.11□□□□□ -0.63
CPT1A-201ENST00000265641 OVGP1Q12889 678 aa11.11□□□□□ -0.63
CPT1A-201ENST00000265641 PIGHQ14442 188 aaPredicted RBP11.11□□□□□ -0.63
CPT1A-201ENST00000265641 MAPK6Q16659 721 aa11.11□□□□□ -0.63
CPT1A-201ENST00000265641 KCTD1Q719H9 257 aa11.11□□□□□ -0.63
CPT1A-201ENST00000265641 DEFB107AQ8IZN7 70 aa11.11□□□□□ -0.63
CPT1A-201ENST00000265641 DCLK2Q8N568 766 aa11.11□□□□□ -0.63
CPT1A-201ENST00000265641 CCNYQ8ND76 341 aa11.11□□□□□ -0.63
CPT1A-201ENST00000265641 PCDH18Q9HCL0 1135 aa11.11□□□□□ -0.63
CPT1A-201ENST00000265641 SLC9A2Q9UBY0 812 aa11.11□□□□□ -0.63
CPT1A-201ENST00000265641 PCDHA6Q9UN73 950 aa11.11□□□□□ -0.63
CPT1A-201ENST00000265641 COQ6Q9Y2Z9 468 aa11.11□□□□□ -0.63
CPT1A-201ENST00000265641 PCDHA8Q9Y5H6 950 aa11.11□□□□□ -0.63
CPT1A-201ENST00000265641 ADGRB2O60241 1585 aa11.11□□□□□ -0.63
CPT1A-201ENST00000265641 UTYO14607 1347 aa11.11□□□□□ -0.63
CPT1A-201ENST00000265641 KRT36O76013 467 aa11.11□□□□□ -0.63
CPT1A-201ENST00000265641 HLA-DPA1P20036 260 aa11.11□□□□□ -0.63
CPT1A-201ENST00000265641 IL6STP40189 918 aaPredicted RBP11.11□□□□□ -0.63
CPT1A-201ENST00000265641 SERPINH1P50454 418 aaKnown RBP11.11□□□□□ -0.63
CPT1A-201ENST00000265641 AP3M2P53677 418 aa11.11□□□□□ -0.63
CPT1A-201ENST00000265641 SCRN3Q0VDG4 424 aa11.11□□□□□ -0.63
CPT1A-201ENST00000265641 TRAF3Q13114 568 aa11.11□□□□□ -0.63
CPT1A-201ENST00000265641 PDK4Q16654 411 aa11.11□□□□□ -0.63
CPT1A-201ENST00000265641 PDCD6IPQ8WUM4 868 aaKnown RBP11.11□□□□□ -0.63
CPT1A-201ENST00000265641 POP5Q969H6 163 aaKnown RBP11.11□□□□□ -0.63
CPT1A-201ENST00000265641 APOPT1Q96IL0 206 aa11.11□□□□□ -0.63
CPT1A-201ENST00000265641 TMEM109Q9BVC6 243 aa11.11□□□□□ -0.63
CPT1A-201ENST00000265641 TEX13BQ9BXU2 312 aa11.11□□□□□ -0.63
CPT1A-201ENST00000265641 RNPEPQ9H4A4 650 aa11.11□□□□□ -0.63
CPT1A-201ENST00000265641 VTI1BQ9UEU0 232 aa11.11□□□□□ -0.63
CPT1A-201ENST00000265641 XDHP47989 1333 aa11.11□□□□□ -0.63
CPT1A-201ENST00000265641 NRKQ7Z2Y5 1582 aa11.11□□□□□ -0.63
CPT1A-201ENST00000265641 GNPATO15228 680 aa11.11□□□□□ -0.63
CPT1A-201ENST00000265641 CBX6O95503 412 aa11.11□□□□□ -0.63
CPT1A-201ENST00000265641 EIF3EP60228 445 aaKnown RBP11.11□□□□□ -0.63
CPT1A-201ENST00000265641 BROXQ5VW32 411 aa11.11□□□□□ -0.63
CPT1A-201ENST00000265641 TTI2Q6NXR4 508 aa11.11□□□□□ -0.63
CPT1A-201ENST00000265641 NDUFAF2Q8N183 169 aa11.11□□□□□ -0.63
CPT1A-201ENST00000265641 FAM13CQ8NE31 585 aa11.11□□□□□ -0.63
CPT1A-201ENST00000265641 RORBQ92753 470 aa11.11□□□□□ -0.63
CPT1A-201ENST00000265641 CCDC126Q96EE4 140 aa11.11□□□□□ -0.63
CPT1A-201ENST00000265641 PPP1R2P1Q96PQ5 205 aa11.11□□□□□ -0.63
CPT1A-201ENST00000265641 DHX36Q9H2U1 1008 aaKnown RBP11.11□□□□□ -0.63
CPT1A-201ENST00000265641 RPRD1BQ9NQG5 326 aaKnown RBP11.11□□□□□ -0.63
CPT1A-201ENST00000265641 THAP1Q9NVV9 213 aa11.11□□□□□ -0.63
CPT1A-201ENST00000265641 SPATA7Q9P0W8 599 aa11.11□□□□□ -0.63
CPT1A-201ENST00000265641 ARHGAP20Q9P2F6 1191 aa11.11□□□□□ -0.63
CPT1A-201ENST00000265641 UBA2Q9UBT2 640 aaPredicted RBP11.11□□□□□ -0.63
CPT1A-201ENST00000265641 SLC8A2Q9UPR5 921 aa11.11□□□□□ -0.63
CPT1A-201ENST00000265641 SHOC2Q9UQ13 582 aa11.11□□□□□ -0.63
CPT1A-201ENST00000265641 KRT20P35900 424 aa11.1□□□□□ -0.63
CPT1A-201ENST00000265641 GTF2IP78347 998 aa11.1□□□□□ -0.63
CPT1A-201ENST00000265641 MECOMQ03112 1051 aa11.1□□□□□ -0.63
CPT1A-201ENST00000265641 ILF2Q12905 390 aaKnown RBP11.1□□□□□ -0.63
CPT1A-201ENST00000265641 CTTNQ14247 550 aaKnown RBP11.1□□□□□ -0.63
CPT1A-201ENST00000265641 C19orf18Q8NEA5 215 aa11.1□□□□□ -0.63
CPT1A-201ENST00000265641 NEDD1Q8NHV4 660 aa11.1□□□□□ -0.63
CPT1A-201ENST00000265641 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.1□□□□□ -0.633e-7■■■□□ 14.6
CPT1A-201ENST00000265641 KLHL3Q9UH77 587 aa11.1□□□□□ -0.63
CPT1A-201ENST00000265641 MYMKA6NI61 221 aa11.1□□□□□ -0.63
CPT1A-201ENST00000265641 KIAA0391O15091 583 aaKnown RBP11.1□□□□□ -0.63
CPT1A-201ENST00000265641 SNAP91O60641 907 aa11.1□□□□□ -0.63
CPT1A-201ENST00000265641 KCNJ1P48048 391 aa11.1□□□□□ -0.63
CPT1A-201ENST00000265641 FOLH1Q04609 750 aa11.1□□□□□ -0.63
CPT1A-201ENST00000265641 CAPRIN1Q14444 709 aaKnown RBP11.1□□□□□ -0.63
CPT1A-201ENST00000265641 TYSND1Q2T9J0 566 aa11.1□□□□□ -0.63
CPT1A-201ENST00000265641 TIMM50Q3ZCQ8 353 aa11.1□□□□□ -0.63
CPT1A-201ENST00000265641 HEATR6Q6AI08 1181 aaKnown RBP11.1□□□□□ -0.63
CPT1A-201ENST00000265641 ELMSAN1Q6PJG2 1045 aa11.1□□□□□ -0.63
CPT1A-201ENST00000265641 ERO1BQ86YB8 467 aa11.1□□□□□ -0.63
CPT1A-201ENST00000265641 FOXP4Q8IVH2 680 aaPredicted RBP11.1□□□□□ -0.63
CPT1A-201ENST00000265641 DHRSXQ8N5I4 330 aa11.1□□□□□ -0.63
CPT1A-201ENST00000265641 SENP7Q9BQF6 1050 aa11.1□□□□□ -0.63
CPT1A-201ENST00000265641 BDH2Q9BUT1 245 aa11.1□□□□□ -0.63
CPT1A-201ENST00000265641 SEMA4AQ9H3S1 761 aa11.1□□□□□ -0.63
CPT1A-201ENST00000265641 ARHGEF3Q9NR81 526 aa11.1□□□□□ -0.63
CPT1A-201ENST00000265641 TYW5A2RUC4 315 aaKnown RBP11.1□□□□□ -0.63
CPT1A-201ENST00000265641 TMEM247A6NEH6 219 aa11.1□□□□□ -0.63
CPT1A-201ENST00000265641 PIK3CDO00329 1044 aa11.1□□□□□ -0.63
CPT1A-201ENST00000265641 DDHD2O94830 711 aa11.1□□□□□ -0.63
CPT1A-201ENST00000265641 MPP3Q13368 585 aa11.1□□□□□ -0.63
CPT1A-201ENST00000265641 CCDC85BQ15834 202 aaPredicted RBP11.1□□□□□ -0.63
CPT1A-201ENST00000265641 CCNG2Q16589 344 aa11.1□□□□□ -0.63
CPT1A-201ENST00000265641 OTULINQ96BN8 352 aa11.1□□□□□ -0.63
CPT1A-201ENST00000265641 CRNNQ9UBG3 495 aaPredicted RBP11.1□□□□□ -0.63
CPT1A-201ENST00000265641 PRPF19Q9UMS4 504 aaKnown RBP11.1□□□□□ -0.63
CPT1A-201ENST00000265641 C15orf38-AP3S2A0A0A6YYH1 394 aa11.1□□□□□ -0.63
CPT1A-201ENST00000265641 TRIM49D1C9J1S8 452 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms