RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 KRT82Q9NSB4 513 aa9.79□□□□□ -0.84
SSR3-201ENST00000265044 ARL5CA6NH57 179 aa9.79□□□□□ -0.84
SSR3-201ENST00000265044 MEIS3P2A8K0S8 358 aa9.79□□□□□ -0.84
SSR3-201ENST00000265044 ZBBXA8MT70 800 aa9.79□□□□□ -0.84
SSR3-201ENST00000265044 O00370 1275 aa9.79□□□□□ -0.84
SSR3-201ENST00000265044 ATP8B1O43520 1251 aa9.79□□□□□ -0.84
SSR3-201ENST00000265044 CST8O60676 142 aa9.79□□□□□ -0.84
SSR3-201ENST00000265044 LMO2P25791 158 aa9.79□□□□□ -0.84
SSR3-201ENST00000265044 BRCC3P46736 316 aa9.79□□□□□ -0.84
SSR3-201ENST00000265044 LHX1P48742 406 aa9.79□□□□□ -0.84
SSR3-201ENST00000265044 ZNF268Q14587 947 aaPredicted RBP9.79□□□□□ -0.84
SSR3-201ENST00000265044 DENND2CQ68D51 928 aa9.79□□□□□ -0.84
SSR3-201ENST00000265044 LEKR1Q6ZMV7 388 aa9.79□□□□□ -0.84
SSR3-201ENST00000265044 SERINC5Q86VE9 423 aa9.79□□□□□ -0.84
SSR3-201ENST00000265044 UNC93AQ86WB7 457 aa9.79□□□□□ -0.84
SSR3-201ENST00000265044 JAMLQ86YT9 394 aa9.79□□□□□ -0.84
SSR3-201ENST00000265044 ZNF784Q8NCA9 323 aaPredicted RBP9.79□□□□□ -0.84
SSR3-201ENST00000265044 CCNYQ8ND76 341 aa9.79□□□□□ -0.84
SSR3-201ENST00000265044 CCDC77Q9BR77 488 aa9.79□□□□□ -0.84
SSR3-201ENST00000265044 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.79□□□□□ -0.84
SSR3-201ENST00000265044 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.79□□□□□ -0.84
SSR3-201ENST00000265044 ABI2Q9NYB9 513 aaPredicted RBP9.79□□□□□ -0.84
SSR3-201ENST00000265044 ANAPC5Q9UJX4 755 aa9.79□□□□□ -0.84
SSR3-201ENST00000265044 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.79□□□□□ -0.84
SSR3-201ENST00000265044 GIT1Q9Y2X7 761 aa9.79□□□□□ -0.84
SSR3-201ENST00000265044 ATP8B3O60423 1300 aa9.79□□□□□ -0.84
SSR3-201ENST00000265044 GOLGA6CA6NDK9 693 aa9.79□□□□□ -0.84
SSR3-201ENST00000265044 HAS3O00219 553 aa9.79□□□□□ -0.84
SSR3-201ENST00000265044 CLDN5O00501 218 aa9.79□□□□□ -0.84
SSR3-201ENST00000265044 MAP3K6O95382 1288 aa9.79□□□□□ -0.84
SSR3-201ENST00000265044 MYZAPP0CAP1 466 aa9.79□□□□□ -0.84
SSR3-201ENST00000265044 GOLGA6DP0CG33 693 aa9.79□□□□□ -0.84
SSR3-201ENST00000265044 ACADSBP45954 432 aa9.79□□□□□ -0.84
SSR3-201ENST00000265044 KRT17Q04695 432 aa9.79□□□□□ -0.84
SSR3-201ENST00000265044 OVOS1Q6IE37 1185 aa9.79□□□□□ -0.84
SSR3-201ENST00000265044 C1orf228Q6PIY5 440 aa9.79□□□□□ -0.84
SSR3-201ENST00000265044 B3GALNT2Q8NCR0 500 aa9.79□□□□□ -0.84
SSR3-201ENST00000265044 WHAMMQ8TF30 809 aa9.79□□□□□ -0.84
SSR3-201ENST00000265044 RNF139Q8WU17 664 aa9.79□□□□□ -0.84
SSR3-201ENST00000265044 P3H4Q92791 437 aa9.79□□□□□ -0.84
SSR3-201ENST00000265044 DDX27Q96GQ7 796 aaKnown RBP9.79□□□□□ -0.84
SSR3-201ENST00000265044 B3GNT5Q9BYG0 378 aa9.79□□□□□ -0.84
SSR3-201ENST00000265044 DPEP3Q9H4B8 488 aa9.79□□□□□ -0.84
SSR3-201ENST00000265044 GOLGA6AQ9NYA3 693 aa9.79□□□□□ -0.84
SSR3-201ENST00000265044 SEPT10Q9P0V9 454 aa9.79□□□□□ -0.84
SSR3-201ENST00000265044 TJP2Q9UDY2 1190 aa9.79□□□□□ -0.84
SSR3-201ENST00000265044 PRKAG2Q9UGJ0 569 aa9.79□□□□□ -0.84
SSR3-201ENST00000265044 ABLIM1O14639 778 aa9.78□□□□□ -0.84
SSR3-201ENST00000265044 PSTPIP1O43586 416 aa9.78□□□□□ -0.84
SSR3-201ENST00000265044 HCRTO43612 131 aa9.78□□□□□ -0.84
SSR3-201ENST00000265044 PTPN1P18031 435 aaKnown RBP9.78□□□□□ -0.84
SSR3-201ENST00000265044 BASP1P80723 227 aaKnown RBP9.78□□□□□ -0.84
SSR3-201ENST00000265044 PTK7Q13308 1070 aa9.78□□□□□ -0.84
SSR3-201ENST00000265044 MTMR3Q13615 1198 aa9.78□□□□□ -0.84
SSR3-201ENST00000265044 DHX34Q14147 1143 aaKnown RBP9.78□□□□□ -0.84
SSR3-201ENST00000265044 C15orf59Q2T9L4 293 aaPredicted RBP9.78□□□□□ -0.84
SSR3-201ENST00000265044 BSPRYQ5W0U4 402 aa9.78□□□□□ -0.84
SSR3-201ENST00000265044 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.78□□□□□ -0.84
SSR3-201ENST00000265044 JOSD2Q8TAC2 188 aa9.78□□□□□ -0.84
SSR3-201ENST00000265044 FAM172AQ8WUF8 416 aa9.78□□□□□ -0.84
SSR3-201ENST00000265044 UBN1Q9NPG3 1134 aa9.78□□□□□ -0.84
SSR3-201ENST00000265044 GPATCH2LQ9NWQ4 482 aa9.78□□□□□ -0.84
SSR3-201ENST00000265044 L1RE1Q9UN81 338 aa9.78□□□□□ -0.84
SSR3-201ENST00000265044 RLFQ13129 1914 aa9.78□□□□□ -0.84
SSR3-201ENST00000265044 ATP2C2O75185 946 aa9.78□□□□□ -0.84
SSR3-201ENST00000265044 CHRNA1P02708 482 aa9.78□□□□□ -0.84
SSR3-201ENST00000265044 SULT1E1P49888 294 aa9.78□□□□□ -0.84
SSR3-201ENST00000265044 TAS2R40P59535 323 aa9.78□□□□□ -0.84
SSR3-201ENST00000265044 POU5F1Q01860 360 aaKnown RBP9.78□□□□□ -0.84
SSR3-201ENST00000265044 ADIGQ0VDE8 80 aa9.78□□□□□ -0.84
SSR3-201ENST00000265044 TFDP2Q14188 446 aa9.78□□□□□ -0.84
SSR3-201ENST00000265044 SEPT7Q16181 437 aaKnown RBP9.78□□□□□ -0.84
SSR3-201ENST00000265044 SOWAHAQ2M3V2 549 aa9.78□□□□□ -0.84
SSR3-201ENST00000265044 BEND6Q5SZJ8 279 aaPredicted RBP9.78□□□□□ -0.84
SSR3-201ENST00000265044 WDR93Q6P2C0 686 aa9.78□□□□□ -0.84
SSR3-201ENST00000265044 ATL2Q8NHH9 583 aa9.78□□□□□ -0.84
SSR3-201ENST00000265044 UBE2Q2Q8WVN8 375 aa9.78□□□□□ -0.84
SSR3-201ENST00000265044 CNPY3Q9BT09 278 aa9.78□□□□□ -0.84
SSR3-201ENST00000265044 USP18Q9UMW8 372 aa9.78□□□□□ -0.84
SSR3-201ENST00000265044 PTPRFP10586 1907 aa9.78□□□□□ -0.84
SSR3-201ENST00000265044 FAM187AA6NFU0 413 aa9.78□□□□□ -0.84
SSR3-201ENST00000265044 SIGLEC16A6NMB1 481 aa9.78□□□□□ -0.84
SSR3-201ENST00000265044 GNRH1P01148 92 aa9.78□□□□□ -0.84
SSR3-201ENST00000265044 RARAP10276 462 aa9.78□□□□□ -0.84
SSR3-201ENST00000265044 NEFHP12036 1026 aa9.78□□□□□ -0.84
SSR3-201ENST00000265044 HOXD8P13378 290 aaPredicted RBP9.78□□□□□ -0.84
SSR3-201ENST00000265044 NCAM1P13591 858 aa9.78□□□□□ -0.84
SSR3-201ENST00000265044 COILP38432 576 aaPredicted RBP9.78□□□□□ -0.84
SSR3-201ENST00000265044 YWHAHQ04917 246 aaPredicted RBP9.78□□□□□ -0.84
SSR3-201ENST00000265044 HIC1Q14526 733 aa9.78□□□□□ -0.84
SSR3-201ENST00000265044 EFHC1Q5JVL4 640 aa9.78□□□□□ -0.84
SSR3-201ENST00000265044 PLEKHA7Q6IQ23 1121 aa9.78□□□□□ -0.84
SSR3-201ENST00000265044 FAM76AQ8TAV0 307 aa9.78□□□□□ -0.84
SSR3-201ENST00000265044 DYDC1Q8WWB3 177 aa9.78□□□□□ -0.84
SSR3-201ENST00000265044 CFAP57Q96MR6 1250 aa9.78□□□□□ -0.84
SSR3-201ENST00000265044 TMEM106CQ9BVX2 250 aa9.78□□□□□ -0.84
SSR3-201ENST00000265044 SIK2Q9H0K1 926 aa9.78□□□□□ -0.84
SSR3-201ENST00000265044 C2CD2LO14523 706 aa9.77□□□□□ -0.85
SSR3-201ENST00000265044 ERBB2P04626 1255 aa9.77□□□□□ -0.85
SSR3-201ENST00000265044 TKTL1P51854 596 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms