RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 SAYSD1Q9NPB0 183 aa17.85■□□□□ 0.45
FOXA1-201ENST00000250448 MSCO60682 206 aa17.84■□□□□ 0.45
FOXA1-201ENST00000250448 HOXC6P09630 235 aa17.84■□□□□ 0.45
FOXA1-201ENST00000250448 IQCF3P0C7M6 154 aa17.84■□□□□ 0.45
FOXA1-201ENST00000250448 GCAP28676 217 aa17.84■□□□□ 0.45
FOXA1-201ENST00000250448 CDC25CP30307 473 aa17.84■□□□□ 0.45
FOXA1-201ENST00000250448 TAS2R40P59535 323 aa17.84■□□□□ 0.45
FOXA1-201ENST00000250448 BIRC2Q13490 618 aa17.84■□□□□ 0.45
FOXA1-201ENST00000250448 SPARCL1Q14515 664 aa17.84■□□□□ 0.45
FOXA1-201ENST00000250448 C2CD6Q53TS8 623 aa17.84■□□□□ 0.45
FOXA1-201ENST00000250448 DENND1AQ8TEH3 1009 aa17.84■□□□□ 0.45
FOXA1-201ENST00000250448 GNEQ9Y223 722 aaKnown RBP17.84■□□□□ 0.45
FOXA1-201ENST00000250448 KAT6AQ92794 2004 aa17.84■□□□□ 0.45
FOXA1-201ENST00000250448 PRPF4O43172 522 aaKnown RBP eCLIP17.84■□□□□ 0.45
FOXA1-201ENST00000250448 SMNDC1O75940 238 aaKnown RBP eCLIP17.84■□□□□ 0.45
FOXA1-201ENST00000250448 PRKCBP05771 671 aa17.84■□□□□ 0.45
FOXA1-201ENST00000250448 GARTP22102 1010 aa17.84■□□□□ 0.45
FOXA1-201ENST00000250448 TARSP26639 723 aaKnown RBP17.84■□□□□ 0.45
FOXA1-201ENST00000250448 TNFSF9P41273 254 aa17.84■□□□□ 0.45
FOXA1-201ENST00000250448 NSFP46459 744 aaKnown RBP17.84■□□□□ 0.45
FOXA1-201ENST00000250448 RGS9BPQ6ZS82 235 aa17.84■□□□□ 0.45
FOXA1-201ENST00000250448 GSTA5Q7RTV2 222 aa17.84■□□□□ 0.45
FOXA1-201ENST00000250448 KATNAL2Q8IYT4 538 aa17.84■□□□□ 0.45
FOXA1-201ENST00000250448 FBXL18Q96ME1 805 aa17.84■□□□□ 0.45
FOXA1-201ENST00000250448 ANKRD27Q96NW4 1050 aa17.84■□□□□ 0.45
FOXA1-201ENST00000250448 APBA2Q99767 749 aa17.84■□□□□ 0.45
FOXA1-201ENST00000250448 TRABDQ9H4I3 376 aa17.84■□□□□ 0.45
FOXA1-201ENST00000250448 GINS2Q9Y248 185 aa17.84■□□□□ 0.45
FOXA1-201ENST00000250448 LIN7AO14910 233 aaPredicted RBP17.83■□□□□ 0.45
FOXA1-201ENST00000250448 GJC1P36383 396 aa17.83■□□□□ 0.45
FOXA1-201ENST00000250448 OSTNP61366 133 aa17.83■□□□□ 0.45
FOXA1-201ENST00000250448 TRIM32Q13049 653 aa17.83■□□□□ 0.45
FOXA1-201ENST00000250448 MXD4Q14582 209 aaPredicted RBP17.83■□□□□ 0.45
FOXA1-201ENST00000250448 TAF11Q15544 211 aa17.83■□□□□ 0.45
FOXA1-201ENST00000250448 GRIK4Q16099 956 aa17.83■□□□□ 0.45
FOXA1-201ENST00000250448 SCARA3Q6AZY7 606 aa17.83■□□□□ 0.45
FOXA1-201ENST00000250448 ZNF677Q86XU0 584 aa17.83■□□□□ 0.45
FOXA1-201ENST00000250448 TMEM237Q96Q45 408 aa17.83■□□□□ 0.45
FOXA1-201ENST00000250448 LRRC37BQ96QE4 947 aa17.83■□□□□ 0.45
FOXA1-201ENST00000250448 SLC24A3Q9HC58 644 aa17.83■□□□□ 0.45
FOXA1-201ENST00000250448 KIAA1586Q9HCI6 787 aa17.83■□□□□ 0.45
FOXA1-201ENST00000250448 C1orf112Q9NSG2 853 aa17.83■□□□□ 0.45
FOXA1-201ENST00000250448 PTPRJQ12913 1337 aa17.83■□□□□ 0.44
FOXA1-201ENST00000250448 A0A087WZ62 844 aa17.83■□□□□ 0.44
FOXA1-201ENST00000250448 LUC7L3O95232 432 aaKnown RBP17.83■□□□□ 0.44
FOXA1-201ENST00000250448 HTRA3P83110 453 aa17.83■□□□□ 0.44
FOXA1-201ENST00000250448 MON1BQ7L1V2 547 aa17.83■□□□□ 0.44
FOXA1-201ENST00000250448 USP37Q86T82 979 aa17.83■□□□□ 0.44
FOXA1-201ENST00000250448 TDRPQ86YL5 185 aa17.83■□□□□ 0.44
FOXA1-201ENST00000250448 INPP5DQ92835 1189 aa17.83■□□□□ 0.44
FOXA1-201ENST00000250448 SPDL1Q96EA4 605 aa17.83■□□□□ 0.44
FOXA1-201ENST00000250448 FDXACB1Q9BRP7 624 aaPredicted RBP17.83■□□□□ 0.44
FOXA1-201ENST00000250448 RNPEPL1Q9HAU8 725 aa17.83■□□□□ 0.44
FOXA1-201ENST00000250448 NKX1-2Q9UD57 310 aaPredicted RBP17.83■□□□□ 0.44
FOXA1-201ENST00000250448 HAO1Q9UJM8 370 aa17.83■□□□□ 0.44
FOXA1-201ENST00000250448 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.83■□□□□ 0.44
FOXA1-201ENST00000250448 ZNF236Q9UL36 1845 aa17.83■□□□□ 0.44
FOXA1-201ENST00000250448 DCTN3O75935 186 aa17.82■□□□□ 0.44
FOXA1-201ENST00000250448 CD58P19256 250 aa17.82■□□□□ 0.44
FOXA1-201ENST00000250448 ZNF484Q5JVG2 852 aa17.82■□□□□ 0.44
FOXA1-201ENST00000250448 MARCH8Q5T0T0 291 aa17.82■□□□□ 0.44
FOXA1-201ENST00000250448 ZBTB8OSQ8IWT0 167 aa17.82■□□□□ 0.44
FOXA1-201ENST00000250448 TRPV1Q8NER1 839 aa17.82■□□□□ 0.44
FOXA1-201ENST00000250448 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.82■□□□□ 0.44
FOXA1-201ENST00000250448 ZNF516Q92618 1163 aa17.82■□□□□ 0.44
FOXA1-201ENST00000250448 TTC25Q96NG3 672 aa17.82■□□□□ 0.44
FOXA1-201ENST00000250448 FAM49AQ9H0Q0 323 aaPredicted RBP17.82■□□□□ 0.44
FOXA1-201ENST00000250448 TMEM134Q9H6X4 195 aa17.82■□□□□ 0.44
FOXA1-201ENST00000250448 SLCO1B3Q9NPD5 702 aa17.82■□□□□ 0.44
FOXA1-201ENST00000250448 SMG5Q9UPR3 1016 aaKnown RBP17.82■□□□□ 0.44
FOXA1-201ENST00000250448 POC1B-GALNT4F8VUJ3 575 aa17.82■□□□□ 0.44
FOXA1-201ENST00000250448 EXTL3O43909 919 aa17.82■□□□□ 0.44
FOXA1-201ENST00000250448 ZC3H11AO75152 810 aaKnown RBP eCLIP17.82■□□□□ 0.44
FOXA1-201ENST00000250448 PEX11AO75192 247 aa17.82■□□□□ 0.44
FOXA1-201ENST00000250448 TOMM70O94826 608 aa17.82■□□□□ 0.44
FOXA1-201ENST00000250448 CYP1A1P04798 512 aaPredicted RBP17.82■□□□□ 0.44
FOXA1-201ENST00000250448 SLC18A1P54219 525 aa17.82■□□□□ 0.44
FOXA1-201ENST00000250448 BLMHQ13867 455 aa17.82■□□□□ 0.44
FOXA1-201ENST00000250448 PDK4Q16654 411 aa17.82■□□□□ 0.44
FOXA1-201ENST00000250448 MAPK6Q16659 721 aa17.82■□□□□ 0.44
FOXA1-201ENST00000250448 MTHFD1LQ6UB35 978 aa17.82■□□□□ 0.44
FOXA1-201ENST00000250448 ANKS1BQ7Z6G8 1248 aa17.82■□□□□ 0.44
FOXA1-201ENST00000250448 EXD1Q8NHP7 514 aa17.82■□□□□ 0.44
FOXA1-201ENST00000250448 MICAL1Q8TDZ2 1067 aa17.82■□□□□ 0.44
FOXA1-201ENST00000250448 CAPNS2Q96L46 248 aa17.82■□□□□ 0.44
FOXA1-201ENST00000250448 KIF9Q9HAQ2 790 aa17.82■□□□□ 0.44
FOXA1-201ENST00000250448 PCDHB2Q9Y5E7 798 aa17.82■□□□□ 0.44
FOXA1-201ENST00000250448 A0A0B4J269 797 aa17.81■□□□□ 0.44
FOXA1-201ENST00000250448 DNALI1O14645 258 aaPredicted RBP17.81■□□□□ 0.44
FOXA1-201ENST00000250448 EDF1O60869 148 aaKnown RBP17.81■□□□□ 0.44
FOXA1-201ENST00000250448 GNAZP19086 355 aa17.81■□□□□ 0.44
FOXA1-201ENST00000250448 ALDH3A1P30838 453 aa17.81■□□□□ 0.44
FOXA1-201ENST00000250448 FLT3LGP49771 235 aa17.81■□□□□ 0.44
FOXA1-201ENST00000250448 PKN2Q16513 984 aaKnown RBP17.81■□□□□ 0.44
FOXA1-201ENST00000250448 LIN9Q5TKA1 542 aa17.81■□□□□ 0.44
FOXA1-201ENST00000250448 EEF1DP3Q658K8 133 aa17.81■□□□□ 0.44
FOXA1-201ENST00000250448 CDCA2Q69YH5 1023 aaPredicted RBP17.81■□□□□ 0.44
FOXA1-201ENST00000250448 CAPRIN2Q6IMN6 1127 aaKnown RBP17.81■□□□□ 0.44
FOXA1-201ENST00000250448 C11orf70Q9BRQ4 267 aa17.81■□□□□ 0.44
FOXA1-201ENST00000250448 GRID1Q9ULK0 1009 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms