RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 ARHGEF1Q92888 912 aaKnown RBP19.11■□□□□ 0.65
PTPN12-201ENST00000248594 RABGAP1Q9Y3P9 1069 aa19.11■□□□□ 0.65
PTPN12-201ENST00000248594 TCEA3O75764 348 aa19.11■□□□□ 0.65
PTPN12-201ENST00000248594 MRPS22P82650 360 aaKnown RBP19.11■□□□□ 0.65
PTPN12-201ENST00000248594 FAAP100Q0VG06 881 aa19.11■□□□□ 0.65
PTPN12-201ENST00000248594 ITGA9Q13797 1035 aa19.11■□□□□ 0.65
PTPN12-201ENST00000248594 BMPR2Q13873 1038 aa19.11■□□□□ 0.65
PTPN12-201ENST00000248594 C16orf87Q6PH81 154 aa19.11■□□□□ 0.65
PTPN12-201ENST00000248594 PTAR1Q7Z6K3 402 aaPredicted RBP19.11■□□□□ 0.65
PTPN12-201ENST00000248594 ZCCHC9Q8N567 271 aaKnown RBP19.11■□□□□ 0.65
PTPN12-201ENST00000248594 BBOF1Q8ND07 529 aa19.11■□□□□ 0.65
PTPN12-201ENST00000248594 ZSWIM2Q8NEG5 633 aa19.11■□□□□ 0.65
PTPN12-201ENST00000248594 DCUN1D1Q96GG9 259 aa19.11■□□□□ 0.65
PTPN12-201ENST00000248594 EFR3BQ9Y2G0 817 aa19.11■□□□□ 0.65
PTPN12-201ENST00000248594 COL1A1P02452 1464 aaPredicted RBP19.11■□□□□ 0.65
PTPN12-201ENST00000248594 BCL9O00512 1426 aa19.11■□□□□ 0.65
PTPN12-201ENST00000248594 P4HA2O15460 535 aa19.1■□□□□ 0.65
PTPN12-201ENST00000248594 SLC5A3P53794 718 aa19.1■□□□□ 0.65
PTPN12-201ENST00000248594 TSPY1Q01534 308 aa19.1■□□□□ 0.65
PTPN12-201ENST00000248594 CD300CQ08708 224 aa19.1■□□□□ 0.65
PTPN12-201ENST00000248594 BFSP1Q12934 665 aa19.1■□□□□ 0.65
PTPN12-201ENST00000248594 PTK7Q13308 1070 aa19.1■□□□□ 0.65
PTPN12-201ENST00000248594 SEPT6Q14141 434 aa19.1■□□□□ 0.65
PTPN12-201ENST00000248594 HIF1AQ16665 826 aa19.1■□□□□ 0.65
PTPN12-201ENST00000248594 SHROOM1Q2M3G4 852 aaPredicted RBP19.1■□□□□ 0.65
PTPN12-201ENST00000248594 USH1GQ495M9 461 aa19.1■□□□□ 0.65
PTPN12-201ENST00000248594 INTS5Q6P9B9 1019 aaKnown RBP19.1■□□□□ 0.65
PTPN12-201ENST00000248594 POLNQ7Z5Q5 900 aa19.1■□□□□ 0.65
PTPN12-201ENST00000248594 PPM1NQ8N819 430 aa19.1■□□□□ 0.65
PTPN12-201ENST00000248594 ATP11CQ8NB49 1132 aa19.1■□□□□ 0.65
PTPN12-201ENST00000248594 COPS7BQ9H9Q2 264 aaPredicted RBP19.1■□□□□ 0.65
PTPN12-201ENST00000248594 RIMBP2O15034 1052 aa19.1■□□□□ 0.65
PTPN12-201ENST00000248594 CD97P48960 835 aa19.1■□□□□ 0.65
PTPN12-201ENST00000248594 OGFOD2Q6N063 350 aa19.1■□□□□ 0.65
PTPN12-201ENST00000248594 SAPCD2Q86UD0 394 aa19.1■□□□□ 0.65
PTPN12-201ENST00000248594 OGFOD1Q8N543 542 aa19.1■□□□□ 0.65
PTPN12-201ENST00000248594 ERMNQ8TAM6 284 aa19.1■□□□□ 0.65
PTPN12-201ENST00000248594 GRIN3AQ8TCU5 1115 aa19.1■□□□□ 0.65
PTPN12-201ENST00000248594 PSPC1Q8WXF1 523 aaKnown RBP19.1■□□□□ 0.65
PTPN12-201ENST00000248594 C11orf70Q9BRQ4 267 aa19.1■□□□□ 0.65
PTPN12-201ENST00000248594 SOX13Q9UN79 622 aa19.1■□□□□ 0.65
PTPN12-201ENST00000248594 DGKIO75912 1065 aa19.1■□□□□ 0.65
PTPN12-201ENST00000248594 OCM2P0CE71 109 aa19.1■□□□□ 0.65
PTPN12-201ENST00000248594 OCMP0CE72 109 aaPredicted RBP19.1■□□□□ 0.65
PTPN12-201ENST00000248594 AKR1B1P15121 316 aa19.1■□□□□ 0.65
PTPN12-201ENST00000248594 PSMC1P62191 440 aaKnown RBP19.1■□□□□ 0.65
PTPN12-201ENST00000248594 GPSM2P81274 684 aa19.1■□□□□ 0.65
PTPN12-201ENST00000248594 SULT2A1Q06520 285 aa19.1■□□□□ 0.65
PTPN12-201ENST00000248594 NFIXQ14938 502 aa19.1■□□□□ 0.65
PTPN12-201ENST00000248594 MAP3K21Q5TCX8 1036 aa19.1■□□□□ 0.65
PTPN12-201ENST00000248594 FBXO36Q8NEA4 188 aa19.1■□□□□ 0.65
PTPN12-201ENST00000248594 CD101Q93033 1021 aa19.1■□□□□ 0.65
PTPN12-201ENST00000248594 CFAP36Q96G28 342 aa19.1■□□□□ 0.65
PTPN12-201ENST00000248594 SERAC1Q96JX3 654 aa19.1■□□□□ 0.65
PTPN12-201ENST00000248594 ZBTB21Q9ULJ3 1066 aa19.1■□□□□ 0.65
PTPN12-201ENST00000248594 DUOX1Q9NRD9 1551 aa19.1■□□□□ 0.65
PTPN12-201ENST00000248594 FBP2O00757 339 aa19.09■□□□□ 0.65
PTPN12-201ENST00000248594 NTSR2O95665 410 aa19.09■□□□□ 0.65
PTPN12-201ENST00000248594 NRLP54845 237 aa19.09■□□□□ 0.65
PTPN12-201ENST00000248594 CDH15P55291 814 aa19.09■□□□□ 0.65
PTPN12-201ENST00000248594 UBXN2AP68543 259 aa19.09■□□□□ 0.65
PTPN12-201ENST00000248594 PRAMEP78395 509 aa19.09■□□□□ 0.65
PTPN12-201ENST00000248594 BASP1P80723 227 aaKnown RBP19.09■□□□□ 0.65
PTPN12-201ENST00000248594 TBC1D9BQ66K14 1250 aa19.09■□□□□ 0.65
PTPN12-201ENST00000248594 NUDCD3Q8IVD9 361 aa19.09■□□□□ 0.65
PTPN12-201ENST00000248594 EPS8L1Q8TE68 723 aa19.09■□□□□ 0.65
PTPN12-201ENST00000248594 CASP10Q92851 521 aa19.09■□□□□ 0.65
PTPN12-201ENST00000248594 NDEL1Q9GZM8 345 aa19.09■□□□□ 0.65
PTPN12-201ENST00000248594 Q9H521 79 aa19.09■□□□□ 0.65
PTPN12-201ENST00000248594 OLFML3Q9NRN5 406 aa19.09■□□□□ 0.65
PTPN12-201ENST00000248594 DMTF1Q9Y222 760 aa19.09■□□□□ 0.65
PTPN12-201ENST00000248594 USP17L10C9JJH3 530 aa19.09■□□□□ 0.65
PTPN12-201ENST00000248594 TOP3BO95985 862 aaKnown RBP19.09■□□□□ 0.65
PTPN12-201ENST00000248594 RPL10P27635 214 aaKnown RBP19.09■□□□□ 0.65
PTPN12-201ENST00000248594 MAN1A1P33908 653 aa19.09■□□□□ 0.65
PTPN12-201ENST00000248594 GSTM4Q03013 218 aa19.09■□□□□ 0.65
PTPN12-201ENST00000248594 CCDC28BQ9BUN5 200 aa19.09■□□□□ 0.65
PTPN12-201ENST00000248594 LDHBP07195 334 aaKnown RBP19.09■□□□□ 0.65
PTPN12-201ENST00000248594 GLRA2P23416 452 aa19.09■□□□□ 0.65
PTPN12-201ENST00000248594 CDK8P49336 464 aa19.09■□□□□ 0.65
PTPN12-201ENST00000248594 HDAC4P56524 1084 aa19.09■□□□□ 0.65
PTPN12-201ENST00000248594 RPS8P62241 208 aaKnown RBP19.09■□□□□ 0.65
PTPN12-201ENST00000248594 PPP3CAQ08209 521 aa19.09■□□□□ 0.65
PTPN12-201ENST00000248594 KRT72Q14CN4 511 aa19.09■□□□□ 0.65
PTPN12-201ENST00000248594 CRLF3Q8IUI8 442 aa19.09■□□□□ 0.65
PTPN12-201ENST00000248594 LRRC43Q8N309 656 aa19.09■□□□□ 0.65
PTPN12-201ENST00000248594 WWP1Q9H0M0 922 aa19.09■□□□□ 0.65
PTPN12-201ENST00000248594 EURLQ9NYK6 297 aa19.09■□□□□ 0.65
PTPN12-201ENST00000248594 HERC5Q9UII4 1024 aaKnown RBP19.09■□□□□ 0.65
PTPN12-201ENST00000248594 TELO2Q9Y4R8 837 aa19.09■□□□□ 0.65
PTPN12-201ENST00000248594 A0A088AWK7 358 aa19.08■□□□□ 0.65
PTPN12-201ENST00000248594 DYTNA2CJ06 578 aa19.08■□□□□ 0.65
PTPN12-201ENST00000248594 TMX2-CTNND1H3BSU7 103 aa19.08■□□□□ 0.65
PTPN12-201ENST00000248594 LYPLA1O75608 230 aaPredicted RBP19.08■□□□□ 0.65
PTPN12-201ENST00000248594 RBP3P10745 1247 aa19.08■□□□□ 0.65
PTPN12-201ENST00000248594 CD151P48509 253 aa19.08■□□□□ 0.65
PTPN12-201ENST00000248594 CLCN2P51788 898 aa19.08■□□□□ 0.65
PTPN12-201ENST00000248594 CACNB3P54284 484 aa19.08■□□□□ 0.65
PTPN12-201ENST00000248594 TAS2R40P59535 323 aa19.08■□□□□ 0.65
PTPN12-201ENST00000248594 CYP2W1Q8TAV3 490 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms