RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 IFRD2Q12894 506 aaPredicted RBP12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 NPY5RQ15761 445 aa12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 PLEKHA7Q6IQ23 1121 aa12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 ACAD10Q6JQN1 1059 aa12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 TRPM4Q8TD43 1214 aa12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 TRAPPC9Q96Q05 1148 aa12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 SLC13A1Q9BZW2 595 aa12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 LPXNO60711 386 aa12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 CAPN15O75808 1086 aa12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 SLURP2P0DP57 97 aa12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 EPHB2P29323 1055 aa12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 CIITAP33076 1130 aa12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 BLMHQ13867 455 aa12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 CDR2LQ86X02 465 aaPredicted RBP12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 DEPDC1BQ8WUY9 529 aa12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 PPP1R14BQ96C90 147 aa12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 NSL1Q96IY1 281 aa12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 MCEEQ96PE7 176 aa12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 EPAS1Q99814 870 aa12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 MRPL1Q9BYD6 325 aaKnown RBP12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 LRRC4Q9HBW1 653 aa12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 DKK3Q9UBP4 350 aa12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 SH3GLB1Q9Y371 365 aa12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 FIS1Q9Y3D6 152 aa12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 BRCA1P38398 1863 aaKnown RBP12.66□□□□□ -0.38
TSPAN9-201ENST00000011898 SYCE1LA8MT33 242 aa12.65□□□□□ -0.38
TSPAN9-201ENST00000011898 M0QYV0 167 aa12.65□□□□□ -0.38
TSPAN9-201ENST00000011898 ZNF263O14978 683 aa12.65□□□□□ -0.38
TSPAN9-201ENST00000011898 TSPAN9O75954 239 aa12.65□□□□□ -0.38
TSPAN9-201ENST00000011898 OATP04181 439 aa12.65□□□□□ -0.38
TSPAN9-201ENST00000011898 ZNF844Q08AG5 666 aa12.65□□□□□ -0.38
TSPAN9-201ENST00000011898 OTOP1Q7RTM1 612 aa12.65□□□□□ -0.38
TSPAN9-201ENST00000011898 APTXQ7Z2E3 356 aaKnown RBP12.65□□□□□ -0.38
TSPAN9-201ENST00000011898 TAS1R2Q8TE23 839 aa12.65□□□□□ -0.38
TSPAN9-201ENST00000011898 TARS2Q9BW92 718 aaKnown RBP12.65□□□□□ -0.38
TSPAN9-201ENST00000011898 ANKEF1Q9NU02 776 aa12.65□□□□□ -0.38
TSPAN9-201ENST00000011898 FBXO40Q9UH90 709 aa12.65□□□□□ -0.38
TSPAN9-201ENST00000011898 ATRNL1Q5VV63 1379 aa12.65□□□□□ -0.38
TSPAN9-201ENST00000011898 BAZ2AQ9UIF9 1905 aaKnown RBP12.65□□□□□ -0.38
TSPAN9-201ENST00000011898 M0QZ92 97 aa12.65□□□□□ -0.38
TSPAN9-201ENST00000011898 XPOTO43592 962 aaKnown RBP12.65□□□□□ -0.38
TSPAN9-201ENST00000011898 FESP07332 822 aa12.65□□□□□ -0.38
TSPAN9-201ENST00000011898 STAT5BP51692 787 aa12.65□□□□□ -0.38
TSPAN9-201ENST00000011898 SNRPFP62306 86 aaKnown RBP12.65□□□□□ -0.38
TSPAN9-201ENST00000011898 SYCP2LQ5T4T6 812 aa12.65□□□□□ -0.38
TSPAN9-201ENST00000011898 TMC3Q7Z5M5 1100 aa12.65□□□□□ -0.38
TSPAN9-201ENST00000011898 SLC47A2Q86VL8 602 aa12.65□□□□□ -0.38
TSPAN9-201ENST00000011898 RFWD2Q8NHY2 731 aa12.65□□□□□ -0.38
TSPAN9-201ENST00000011898 RXFP1Q9HBX9 757 aa12.65□□□□□ -0.38
TSPAN9-201ENST00000011898 SNX5Q9Y5X3 404 aa12.65□□□□□ -0.38
TSPAN9-201ENST00000011898 COL2A1P02458 1487 aaPredicted RBP12.65□□□□□ -0.38
TSPAN9-201ENST00000011898 SDC4P31431 198 aa12.65□□□□□ -0.38
TSPAN9-201ENST00000011898 USP46P62068 366 aa12.65□□□□□ -0.38
TSPAN9-201ENST00000011898 PRKCEQ02156 737 aa12.65□□□□□ -0.38
TSPAN9-201ENST00000011898 OVGP1Q12889 678 aa12.65□□□□□ -0.38
TSPAN9-201ENST00000011898 TKFCQ3LXA3 575 aa12.65□□□□□ -0.38
TSPAN9-201ENST00000011898 DNAL1Q4LDG9 190 aa12.65□□□□□ -0.38
TSPAN9-201ENST00000011898 BTNL9Q6UXG8 535 aa12.65□□□□□ -0.38
TSPAN9-201ENST00000011898 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.65□□□□□ -0.38
TSPAN9-201ENST00000011898 HACE1Q8IYU2 909 aa12.65□□□□□ -0.38
TSPAN9-201ENST00000011898 BRD8Q9H0E9 1235 aa12.65□□□□□ -0.38
TSPAN9-201ENST00000011898 RANBP17Q9H2T7 1088 aaKnown RBP12.65□□□□□ -0.38
TSPAN9-201ENST00000011898 EURLQ9NYK6 297 aa12.65□□□□□ -0.38
TSPAN9-201ENST00000011898 ADA2Q9NZK5 511 aa12.65□□□□□ -0.38
TSPAN9-201ENST00000011898 GNGT2O14610 69 aa12.64□□□□□ -0.39
TSPAN9-201ENST00000011898 KIAA0391O15091 583 aaKnown RBP12.64□□□□□ -0.39
TSPAN9-201ENST00000011898 VCAM1P19320 739 aa12.64□□□□□ -0.39
TSPAN9-201ENST00000011898 PTDSS1P48651 473 aaKnown RBP12.64□□□□□ -0.39
TSPAN9-201ENST00000011898 GALK1P51570 392 aa12.64□□□□□ -0.39
TSPAN9-201ENST00000011898 PPP1R15BQ5SWA1 713 aa12.64□□□□□ -0.39
TSPAN9-201ENST00000011898 LRRC74BQ6ZQY2 392 aa12.64□□□□□ -0.39
TSPAN9-201ENST00000011898 TATDN2Q93075 761 aa12.64□□□□□ -0.39
TSPAN9-201ENST00000011898 TEX13BQ9BXU2 312 aa12.64□□□□□ -0.39
TSPAN9-201ENST00000011898 CYLDQ9NQC7 956 aa12.64□□□□□ -0.39
TSPAN9-201ENST00000011898 SMG5Q9UPR3 1016 aaKnown RBP12.64□□□□□ -0.39
TSPAN9-201ENST00000011898 DTNAQ9Y4J8 743 aa12.64□□□□□ -0.39
TSPAN9-201ENST00000011898 RRM1P23921 792 aa12.64□□□□□ -0.39
TSPAN9-201ENST00000011898 PPM1FP49593 454 aaPredicted RBP12.64□□□□□ -0.39
TSPAN9-201ENST00000011898 RAB27AP51159 221 aa12.64□□□□□ -0.39
TSPAN9-201ENST00000011898 EIF3EP60228 445 aaKnown RBP12.64□□□□□ -0.39
TSPAN9-201ENST00000011898 NLRP9Q7RTR0 991 aa12.64□□□□□ -0.39
TSPAN9-201ENST00000011898 TMEM110Q86TL2 294 aa12.64□□□□□ -0.39
TSPAN9-201ENST00000011898 SERPINB12Q96P63 405 aa12.64□□□□□ -0.39
TSPAN9-201ENST00000011898 CCDC134Q9H6E4 229 aa12.64□□□□□ -0.39
TSPAN9-201ENST00000011898 SCHIP1Q9P0W5 487 aaPredicted RBP12.64□□□□□ -0.39
TSPAN9-201ENST00000011898 TMX2Q9Y320 296 aa12.64□□□□□ -0.39
TSPAN9-201ENST00000011898 COL4A5P29400 1685 aa12.64□□□□□ -0.39
TSPAN9-201ENST00000011898 TBC1D12O60347 775 aa12.64□□□□□ -0.39
TSPAN9-201ENST00000011898 ATP6V1C1P21283 382 aa12.64□□□□□ -0.39
TSPAN9-201ENST00000011898 MUTP22033 750 aa12.64□□□□□ -0.39
TSPAN9-201ENST00000011898 OTUD4Q01804 1114 aaKnown RBP12.64□□□□□ -0.39
TSPAN9-201ENST00000011898 SLC34A1Q06495 639 aa12.64□□□□□ -0.39
TSPAN9-201ENST00000011898 GABPAQ06546 454 aa12.64□□□□□ -0.39
TSPAN9-201ENST00000011898 ANO4Q32M45 955 aa12.64□□□□□ -0.39
TSPAN9-201ENST00000011898 GALNT15Q8N3T1 639 aa12.64□□□□□ -0.39
TSPAN9-201ENST00000011898 STKLD1Q8NE28 680 aa12.64□□□□□ -0.39
TSPAN9-201ENST00000011898 ZC3H15Q8WU90 426 aaKnown RBP12.64□□□□□ -0.39
TSPAN9-201ENST00000011898 WWP1Q9H0M0 922 aa12.64□□□□□ -0.39
TSPAN9-201ENST00000011898 DNAAF2Q9NVR5 837 aaKnown RBP12.64□□□□□ -0.39
TSPAN9-201ENST00000011898 TLK1Q9UKI8 766 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms