RNA–Protein interactions for RNA: ENSMUST00000215817.1

Upf1-202, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Upf1, Length 4,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-202ENSMUST00000215817 Zdhhc19Q810M5 347 aa16.04■□□□□ 0.16
Upf1-202ENSMUST00000215817 Heatr3Q8BQM4 679 aa16.04■□□□□ 0.16
Upf1-202ENSMUST00000215817 Atp2a1Q8R429 994 aa16.04■□□□□ 0.16
Upf1-202ENSMUST00000215817 Pex19Q8VCI5 299 aa16.04■□□□□ 0.16
Upf1-202ENSMUST00000215817 Agap3Q8VHH5 910 aa16.04■□□□□ 0.16
Upf1-202ENSMUST00000215817 Serpina1fQ9DCQ7 411 aa16.04■□□□□ 0.16
Upf1-202ENSMUST00000215817 Aldh18a1Q9Z110 795 aa16.04■□□□□ 0.16
Upf1-202ENSMUST00000215817 Atrnl1Q6A051 1378 aa16.04■□□□□ 0.16
Upf1-202ENSMUST00000215817 Trim12cD3Z3L3 497 aa16.04■□□□□ 0.16
Upf1-202ENSMUST00000215817 Mup5P11591 180 aa16.04■□□□□ 0.16
Upf1-202ENSMUST00000215817 Pcbp1P60335 356 aaKnown RBP16.04■□□□□ 0.16
Upf1-202ENSMUST00000215817 Crhr2Q60748 411 aa16.04■□□□□ 0.16
Upf1-202ENSMUST00000215817 NntQ61941 1086 aaKnown RBP16.04■□□□□ 0.16
Upf1-202ENSMUST00000215817 Nlrp4fQ66X05 959 aa16.04■□□□□ 0.16
Upf1-202ENSMUST00000215817 Ubap2lQ80X50 1107 aaKnown RBP16.04■□□□□ 0.16
Upf1-202ENSMUST00000215817 Cnksr3Q8BMA3 555 aa16.04■□□□□ 0.16
Upf1-202ENSMUST00000215817 Acad9Q8JZN5 625 aaKnown RBP16.04■□□□□ 0.16
Upf1-202ENSMUST00000215817 Cyp2c55Q9D816 490 aa16.04■□□□□ 0.16
Upf1-202ENSMUST00000215817 Stk4Q9JI11 487 aa16.04■□□□□ 0.16
Upf1-202ENSMUST00000215817 Mup10A2BIN1 180 aa16.04■□□□□ 0.16
Upf1-202ENSMUST00000215817 Mup14A2CEK7 180 aa16.04■□□□□ 0.16
Upf1-202ENSMUST00000215817 Lrriq4A6H6A4 596 aa16.04■□□□□ 0.16
Upf1-202ENSMUST00000215817 Gm16430A6X8J1 155 aa16.04■□□□□ 0.16
Upf1-202ENSMUST00000215817 Mup19A9C497 187 aa16.04■□□□□ 0.16
Upf1-202ENSMUST00000215817 Mup15A9R9W0 180 aa16.04■□□□□ 0.16
Upf1-202ENSMUST00000215817 Mup17B5X0G2 180 aa16.04■□□□□ 0.16
Upf1-202ENSMUST00000215817 Tatdn2B7ZNL9 783 aaKnown RBP16.04■□□□□ 0.16
Upf1-202ENSMUST00000215817 Mup8E9PVW0 235 aa16.04■□□□□ 0.16
Upf1-202ENSMUST00000215817 Mup7E9QA79 235 aa16.04■□□□□ 0.16
Upf1-202ENSMUST00000215817 Mup6P02762 180 aa16.04■□□□□ 0.16
Upf1-202ENSMUST00000215817 Mup1P11588 180 aa16.04■□□□□ 0.16
Upf1-202ENSMUST00000215817 Mup2P11589 180 aa16.04■□□□□ 0.16
Upf1-202ENSMUST00000215817 PrphP15331 475 aa16.04■□□□□ 0.16
Upf1-202ENSMUST00000215817 Slc30a9Q5IRJ6 567 aa16.04■□□□□ 0.16
Upf1-202ENSMUST00000215817 Zmym6Q8BS54 1249 aa16.04■□□□□ 0.16
Upf1-202ENSMUST00000215817 Kctd2Q8CEZ0 266 aa16.04■□□□□ 0.16
Upf1-202ENSMUST00000215817 Stau2Q8CJ67 570 aaKnown RBP16.04■□□□□ 0.16
Upf1-202ENSMUST00000215817 Tmem86aQ9D8N3 241 aa16.04■□□□□ 0.16
Upf1-202ENSMUST00000215817 Eif4e3Q9DBB5 207 aa16.04■□□□□ 0.16
Upf1-202ENSMUST00000215817 Myh13B1AR69 1938 aa16.03■□□□□ 0.16
Upf1-202ENSMUST00000215817 Ppfia4B8QI36 1187 aa16.03■□□□□ 0.16
Upf1-202ENSMUST00000215817 Tp53P02340 387 aa16.03■□□□□ 0.16
Upf1-202ENSMUST00000215817 AdssP46664 456 aa16.03■□□□□ 0.16
Upf1-202ENSMUST00000215817 Tarbp2P97473 365 aa16.03■□□□□ 0.16
Upf1-202ENSMUST00000215817 Bank1Q80VH0 783 aa16.03■□□□□ 0.16
Upf1-202ENSMUST00000215817 Efcab14Q8BGQ6 484 aa16.03■□□□□ 0.16
Upf1-202ENSMUST00000215817 Ppp6r2Q8R3Q2 923 aa16.03■□□□□ 0.16
Upf1-202ENSMUST00000215817 Golga1Q9CW79 758 aa16.03■□□□□ 0.16
Upf1-202ENSMUST00000215817 Rrp15Q9CYX7 281 aaKnown RBP16.03■□□□□ 0.16
Upf1-202ENSMUST00000215817 Actn2Q9JI91 894 aa16.03■□□□□ 0.16
Upf1-202ENSMUST00000215817 Fkbp1bQ9Z2I2 108 aa16.03■□□□□ 0.16
Upf1-202ENSMUST00000215817 Myo7aP97479 2215 aa16.03■□□□□ 0.16
Upf1-202ENSMUST00000215817 Gpr156Q6PCP7 798 aa16.03■□□□□ 0.16
Upf1-202ENSMUST00000215817 OafQ8QZR4 282 aa16.03■□□□□ 0.16
Upf1-202ENSMUST00000215817 NelfcdQ922L6 591 aa16.03■□□□□ 0.16
Upf1-202ENSMUST00000215817 Myh7Q91Z83 1935 aa16.03■□□□□ 0.16
Upf1-202ENSMUST00000215817 Myl4P09541 193 aaKnown RBP16.03■□□□□ 0.16
Upf1-202ENSMUST00000215817 NrlP54846 237 aa16.03■□□□□ 0.16
Upf1-202ENSMUST00000215817 Casp7P97864 303 aa16.03■□□□□ 0.16
Upf1-202ENSMUST00000215817 Snrnp25Q8VIK1 123 aa16.03■□□□□ 0.16
Upf1-202ENSMUST00000215817 Pip4k2cQ91XU3 421 aa16.03■□□□□ 0.16
Upf1-202ENSMUST00000215817 Iigp1Q9QZ85 413 aa16.03■□□□□ 0.16
Upf1-202ENSMUST00000215817 Ess2O70279 479 aa16.02■□□□□ 0.16
Upf1-202ENSMUST00000215817 RnaselQ05921 735 aa16.02■□□□□ 0.16
Upf1-202ENSMUST00000215817 Kcnc4Q8R1C0 628 aa16.02■□□□□ 0.16
Upf1-202ENSMUST00000215817 Rprd1aQ8VDS4 312 aa16.02■□□□□ 0.16
Upf1-202ENSMUST00000215817 Yaf2Q99LW6 179 aa16.02■□□□□ 0.16
Upf1-202ENSMUST00000215817 Spc24Q9D083 201 aa16.02■□□□□ 0.16
Upf1-202ENSMUST00000215817 Erap1Q9EQH2 930 aa16.02■□□□□ 0.16
Upf1-202ENSMUST00000215817 Mgea5Q9EQQ9 916 aa16.02■□□□□ 0.16
Upf1-202ENSMUST00000215817 Sf3b1Q99NB9 1304 aaKnown RBP16.02■□□□□ 0.16
Upf1-202ENSMUST00000215817 Zfp94E9Q6Y4 486 aa16.02■□□□□ 0.16
Upf1-202ENSMUST00000215817 Klra5Q60652 266 aa16.02■□□□□ 0.16
Upf1-202ENSMUST00000215817 Cyp3a11Q64459 504 aa16.02■□□□□ 0.16
Upf1-202ENSMUST00000215817 HpseQ6YGZ1 535 aa16.02■□□□□ 0.16
Upf1-202ENSMUST00000215817 Dnajc14Q921R4 703 aa16.02■□□□□ 0.16
Upf1-202ENSMUST00000215817 Chst12Q99LL3 419 aa16.02■□□□□ 0.16
Upf1-202ENSMUST00000215817 SufuQ9Z0P7 484 aa16.02■□□□□ 0.16
Upf1-202ENSMUST00000215817 Cacna2d3Q9Z1L5 1091 aa16.02■□□□□ 0.16
Upf1-202ENSMUST00000215817 Olfr1023A2ASU6 311 aa16.02■□□□□ 0.15
Upf1-202ENSMUST00000215817 Fgfr1P16092 822 aa16.02■□□□□ 0.15
Upf1-202ENSMUST00000215817 Fam172aQ3TNH5 417 aa16.02■□□□□ 0.15
Upf1-202ENSMUST00000215817 Znf746Q3U133 652 aa16.02■□□□□ 0.15
Upf1-202ENSMUST00000215817 Tmed1Q3V009 227 aa16.02■□□□□ 0.15
Upf1-202ENSMUST00000215817 Spatc1lQ9D9W0 342 aa16.02■□□□□ 0.15
Upf1-202ENSMUST00000215817 Myh6Q02566 1938 aaKnown RBP16.02■□□□□ 0.15
Upf1-202ENSMUST00000215817 Gm29133A0A1B0GT72 266 aa16.02■□□□□ 0.15
Upf1-202ENSMUST00000215817 Mfsd14aP70187 490 aa16.02■□□□□ 0.15
Upf1-202ENSMUST00000215817 Pnma3Q8JZW8 466 aa16.02■□□□□ 0.15
Upf1-202ENSMUST00000215817 Bud13Q8R149 637 aa16.02■□□□□ 0.15
Upf1-202ENSMUST00000215817 Rps6ka2Q9WUT3 733 aa16.02■□□□□ 0.15
Upf1-202ENSMUST00000215817 AfdnQ9QZQ1 1820 aaKnown RBP16.01■□□□□ 0.15
Upf1-202ENSMUST00000215817 Grik3B1AS29 919 aa16.01■□□□□ 0.15
Upf1-202ENSMUST00000215817 Gm6588E9Q3K0 461 aa16.01■□□□□ 0.15
Upf1-202ENSMUST00000215817 AlpiF8VPQ6 554 aa16.01■□□□□ 0.15
Upf1-202ENSMUST00000215817 Lrrc23O35125 340 aa16.01■□□□□ 0.15
Upf1-202ENSMUST00000215817 Psma2P49722 234 aa16.01■□□□□ 0.15
Upf1-202ENSMUST00000215817 Slc1a1P51906 523 aa16.01■□□□□ 0.15
Upf1-202ENSMUST00000215817 Ttc39dQ0VF76 604 aa16.01■□□□□ 0.15
Upf1-202ENSMUST00000215817 Agap2Q3UHD9 1186 aa16.01■□□□□ 0.15
Retrieved 100 of 22,080 RNA–protein pairs in 48.5 ms