RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 Cpsf4Q8BQZ5 211 aaKnown RBP9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Cep95Q8BVV7 827 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Prdm8Q8BZ97 687 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Nxnl1Q8VC33 217 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Cxcl11Q9JHH5 100 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Hao1Q9WU19 370 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Zbed6D2EAC2 980 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Gm5478D3Z6R0 159 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Dnal1Q05A62 190 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 InscQ3HNM7 579 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Dsg1aQ61495 1057 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Scd4Q6T707 353 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Ttll4Q80UG8 1193 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Amz1Q8BVF9 502 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Polr3fQ921X6 316 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Slc5a4aQ9ET37 656 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Rbck1Q9WUB0 508 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Scgb2b18A0A087WPA9 112 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Grik3B1AS29 919 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Erich1E9PY43 332 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Gm5407E9Q7Q1 248 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Rgs5O08850 181 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Aff1O88573 1216 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 RapsnP12672 412 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Nedd8P29595 81 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 CntfP51642 198 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Mettl25Q6NXH8 597 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Dhx40Q6PE54 779 aaKnown RBP9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Ahcyl1Q80SW1 530 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Lrrc24Q8BHA1 521 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Dcdc2cQ9D1B8 347 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Wwp2Q9DBH0 870 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 MypnQ5DTJ9 1315 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Kctd14A0A0U1RNG7 287 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Akap1O08715 857 aaKnown RBP9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Ap2a2P17427 938 aaKnown RBP9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Pabpc1P29341 636 aaKnown RBP9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Epb41l4aP52963 686 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Lad1P57016 528 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Msx3P70354 204 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Sephs2P97364 452 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Myl12bQ3THE2 172 aaKnown RBP9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 NfkbibQ60778 359 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Inpp5bQ8K337 993 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Akr1c20Q8VC77 323 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Fem1bQ9Z2G0 627 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Scgb2b7D3YYY1 112 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 CratP47934 626 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Irf5P56477 497 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Wdr48Q8BH57 676 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Arhgap22Q8BL80 702 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Nlrp10Q8CCN1 673 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 CopaQ8CIE6 1224 aaKnown RBP9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Hspa12bQ9CZJ2 685 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Gabbr1Q9WV18 960 aa9.66□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Gm43518A0A0G2JGB6 165 aa9.65□□□□□ -0.86
Col6a5-201ENSMUST00000165165 4933408B17RikG3X9B4 273 aa9.65□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Kpna6O35345 536 aa9.65□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Cyp2j11Q3UNV2 504 aa9.65□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Dedd2Q8QZV0 330 aa9.65□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Tti1Q91V83 1085 aa9.65□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Prkar1aQ9DBC7 381 aa9.65□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Abcc12Q80WJ6 1366 aa9.65□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Lmtk2Q3TYD6 1471 aa9.65□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Pfkfb3A7UAK5 555 aa9.65□□□□□ -0.86
Col6a5-201ENSMUST00000165165 RxrgP28705 463 aa9.65□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Cdca2Q14B71 982 aaKnown RBP9.65□□□□□ -0.86
Col6a5-201ENSMUST00000165165 ZfatQ7TS63 1237 aa9.65□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Mief1Q8BGV8 463 aa9.65□□□□□ -0.86
Col6a5-201ENSMUST00000165165 NlnQ91YP2 704 aa9.65□□□□□ -0.86
Col6a5-201ENSMUST00000165165 B020011L13RikA0A087WQI7 412 aa9.65□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Zfp811A0A0J9YU71 552 aa9.65□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Hmox2O70252 315 aa9.65□□□□□ -0.86
Col6a5-201ENSMUST00000165165 D1Pas1P16381 660 aa9.65□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Gja1P23242 382 aa9.65□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Tmem165P52875 323 aa9.65□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Mapk1P63085 358 aa9.65□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Lrrc47Q505F5 581 aaKnown RBP9.65□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Acot5Q6Q2Z6 421 aa9.65□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Tada2aQ8CHV6 443 aa9.65□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Galnt18Q8K1B9 622 aa9.65□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Golph3lQ8R088 285 aaKnown RBP9.65□□□□□ -0.86
Col6a5-201ENSMUST00000165165 RorbQ8R1B8 470 aa9.65□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Klhl25Q8R2P1 589 aa9.65□□□□□ -0.86
Col6a5-201ENSMUST00000165165 CbsQ91WT9 561 aa9.65□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Lsm7Q9CQQ8 103 aaKnown RBP9.65□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Prdm5Q9CXE0 599 aa9.65□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Tagln3Q9R1Q8 199 aa9.65□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Casz1Q9CWL2 1761 aa9.65□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Btbd3P58545 530 aa9.65□□□□□ -0.86
Col6a5-201ENSMUST00000165165 ThraP63058 492 aa9.65□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Togaram2Q3TYG6 1002 aa9.65□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Kctd8Q50H33 476 aa9.65□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Zfyve1Q810J8 777 aa9.65□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Mgat4aQ812G0 535 aa9.65□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Zbtb46Q8BID6 600 aa9.65□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Zbtb33Q8BN78 671 aa9.65□□□□□ -0.86
Col6a5-201ENSMUST00000165165 LRWD1Q8BUI3 648 aaKnown RBP9.65□□□□□ -0.86
Col6a5-201ENSMUST00000165165 AopepQ8BXQ6 817 aa9.65□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Dnajc5gQ8C632 165 aa9.65□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 50.4 ms