RNA–Protein interactions for RNA: ENSMUST00000156585.7

Ldb1-207, Transcript of LIM domain-binding protein 1, mousemouse

TSL 1 (best) BASIC

Gene Ldb1, Length 2,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1-207ENSMUST00000156585 Ndufab1Q9CR21 156 aa28.59■■■□□ 2.17
Ldb1-207ENSMUST00000156585 Ppp1r12aQ9DBR7 1029 aaKnown RBP28.59■■■□□ 2.17
Ldb1-207ENSMUST00000156585 AspgA0JNU3 564 aa28.59■■■□□ 2.17
Ldb1-207ENSMUST00000156585 Zfp990B1AVN5 605 aa28.59■■■□□ 2.17
Ldb1-207ENSMUST00000156585 Fscn1Q61553 493 aa28.59■■■□□ 2.17
Ldb1-207ENSMUST00000156585 Wnk4Q80UE6 1222 aa28.59■■■□□ 2.17
Ldb1-207ENSMUST00000156585 Tmem120aQ8C1E7 343 aa28.59■■■□□ 2.17
Ldb1-207ENSMUST00000156585 Kiaa1522A2A7S8 1013 aa28.58■■■□□ 2.17
Ldb1-207ENSMUST00000156585 Patl2A2ARM1 529 aa28.58■■■□□ 2.17
Ldb1-207ENSMUST00000156585 Edil3O35474 480 aa28.58■■■□□ 2.17
Ldb1-207ENSMUST00000156585 Vmn2r1O70410 912 aa28.58■■■□□ 2.17
Ldb1-207ENSMUST00000156585 RargP18911 458 aaKnown RBP28.58■■■□□ 2.17
Ldb1-207ENSMUST00000156585 Gjb3P28231 270 aa28.58■■■□□ 2.17
Ldb1-207ENSMUST00000156585 Rab20P35295 233 aa28.58■■■□□ 2.17
Ldb1-207ENSMUST00000156585 Atp13a5Q3TYU2 1216 aa28.58■■■□□ 2.17
Ldb1-207ENSMUST00000156585 Neto2Q8BNJ6 525 aa28.58■■■□□ 2.17
Ldb1-207ENSMUST00000156585 Pyhin1Q8BV49 420 aa28.58■■■□□ 2.17
Ldb1-207ENSMUST00000156585 Mtss1Q8R1S4 759 aa28.58■■■□□ 2.17
Ldb1-207ENSMUST00000156585 Fam49bQ921M7 324 aa28.58■■■□□ 2.17
Ldb1-207ENSMUST00000156585 Tbc1d16A2ABG4 766 aa28.57■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Vmn2r121A2BE32 847 aa28.57■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Adgrf2E9Q4J9 644 aa28.57■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Pcdh9F8VPK8 1237 aa28.57■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Zfp90Q61967 636 aa28.57■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Fcrl5Q68SN8 596 aa28.57■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Gpatch2lQ6PE65 482 aa28.57■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Rassf10Q8BL43 508 aa28.57■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Enpp4Q8BTJ4 456 aa28.57■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Acbd6Q9D061 282 aa28.57■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Extl1Q9JKV7 669 aa28.57■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Sgk1Q9WVC6 431 aa28.57■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Fscn2Q32M02 492 aa28.57■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Zfp658Q5PPQ4 887 aa28.57■■■□□ 2.16
Ldb1-207ENSMUST00000156585 MogsQ80UM7 834 aaKnown RBP28.57■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Pomgnt1Q91X88 660 aa28.57■■■□□ 2.16
Ldb1-207ENSMUST00000156585 St13Q99L47 371 aaKnown RBP28.57■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Mcur1Q9CXD6 340 aa28.57■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Krt27Q9Z320 448 aa28.57■■■□□ 2.16
Ldb1-207ENSMUST00000156585 2010300C02RikE9Q3M9 1175 aa28.56■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Aff1O88573 1216 aa28.56■■■□□ 2.16
Ldb1-207ENSMUST00000156585 AfpP02772 605 aa28.56■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Zfp42P22227 288 aa28.56■■■□□ 2.16
Ldb1-207ENSMUST00000156585 PuraP42669 321 aaKnown RBP28.56■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Ddx4Q61496 702 aa28.56■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Taf5Q8C092 801 aa28.56■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Slc35f6Q8VE96 372 aa28.56■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Micu3Q9CTY5 523 aa28.56■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Piwil1Q9JMB7 862 aa28.56■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Tubb1A2AQ07 451 aa28.55■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Kcnk16G5E845 292 aa28.55■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Hoxc8P09025 242 aa28.55■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Pcsk1P63239 753 aa28.55■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Mex3cQ05A36 652 aaKnown RBP28.55■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Arhgap44Q5SSM3 814 aa28.55■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Tcaf3Q6QR59 914 aa28.55■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Olfr389Q7TRX7 312 aa28.55■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Dusp21Q9D9D8 189 aa28.55■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Iqcf1Q9D9K8 182 aa28.55■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Snx1Q9WV80 522 aa28.55■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Ankrd16A2AS55 361 aa28.55■■■□□ 2.16
Ldb1-207ENSMUST00000156585 JrklB2RRL2 523 aa28.55■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Casq2O09161 415 aa28.55■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Adam19O35674 920 aa28.55■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Btg3P50615 252 aa28.55■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Papd5Q68ED3 633 aaKnown RBP28.55■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Zbed4Q80WQ9 1168 aa28.55■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Fbxw21Q8BI38 468 aa28.55■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Trub1Q8C0D0 338 aaKnown RBP28.55■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Rnf181Q9CY62 165 aa28.55■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Gdap2Q9DBL2 498 aa28.55■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Prl2a1Q9JHK0 228 aa28.55■■■□□ 2.16
Ldb1-207ENSMUST00000156585 ThadaA8C756 1938 aa28.54■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Vmn2r17E9PYF5 849 aa28.54■■■□□ 2.16
Ldb1-207ENSMUST00000156585 RxrbP28704 520 aa28.54■■■□□ 2.16
Ldb1-207ENSMUST00000156585 9130409I23RikQ3TS87 320 aa28.54■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Tdrd5Q5VCS6 1040 aa28.54■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Arl5cQ6P068 179 aa28.54■■■□□ 2.16
Ldb1-207ENSMUST00000156585 WtipQ7TQJ8 398 aa28.54■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Sh3tc2Q80VA5 1289 aa28.54■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Sbk1Q8QZX0 417 aa28.54■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Wdr98Q8VC42 657 aa28.54■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Caln1Q9JJG7 219 aa28.54■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Sox8Q04886 464 aa28.53■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Avpr1aQ62463 423 aa28.53■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Kiaa1328Q6NZK5 612 aa28.53■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Kif11Q6P9P6 1052 aa28.53■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Q8CCC3 530 aa28.53■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Unc45bQ8CGY6 931 aaKnown RBP28.53■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Tm4sf4Q91XD3 202 aa28.53■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Trap1Q9CQN1 706 aaKnown RBP28.53■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Tsc1Q9EP53 1161 aa28.53■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Ildr2B5TVM2 661 aa28.53■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Vmn2r55G3UWZ4 781 aa28.53■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Vmn2r53L7N473 806 aa28.53■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Trappc3O55013 180 aa28.53■■■□□ 2.16
Ldb1-207ENSMUST00000156585 TnfP06804 235 aa28.53■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Psmc4P54775 418 aa28.53■■■□□ 2.16
Ldb1-207ENSMUST00000156585 GaaP70699 953 aa28.53■■■□□ 2.16
Ldb1-207ENSMUST00000156585 Irx1P81068 480 aa28.53■■■□□ 2.16
Ldb1-207ENSMUST00000156585 InscQ3HNM7 579 aa28.53■■■□□ 2.16
Retrieved 100 of 22,080 RNA–protein pairs in 36.7 ms