RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Serpinb3aG3X9V8 387 aa10.14□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Bnc1O35914 961 aa10.14□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Krt10P02535 570 aa10.14□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 L1camP11627 1260 aa10.14□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Atf2P16951 487 aaKnown RBP10.14□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 ItgavP43406 1044 aa10.14□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Slc1a1P51906 523 aa10.14□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Cyp2a12P56593 492 aa10.14□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Arl1P61211 181 aa10.14□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Larp7Q05CL8 570 aaKnown RBP10.14□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Ptcd3Q14C51 685 aaKnown RBP10.14□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 ZufspQ3T9Z9 577 aa10.14□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Grik5Q61626 979 aa10.14□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Q6DFW0 481 aa10.14□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Ssxb10Q6XAR7 170 aa10.14□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Prdx6bQ8BG37 224 aa10.14□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Orai2Q8BH10 250 aa10.14□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Mageb18Q8BQR7 327 aa10.14□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Zfp398Q8BV16 643 aa10.14□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Ipo11Q8K2V6 975 aa10.14□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Ttc1Q91Z38 292 aa10.14□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Usp26Q99MX1 835 aa10.14□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Cadm3Q99N28 396 aa10.14□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Timm22Q9CQ85 194 aa10.14□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Snrnp35Q9D384 244 aa10.14□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Clvs1Q9D4C9 354 aa10.14□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 PrccQ9EQC8 491 aaKnown RBP10.14□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Krt17Q9QWL7 433 aa10.14□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Prdm11A2AGX3 565 aa10.13□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Ankle1A8VU90 534 aa10.13□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Gm21738J3QP72 227 aa10.13□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Psmc3O88685 442 aa10.13□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Tlr8P58682 1032 aa10.13□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Nkx2-3P97334 362 aa10.13□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Slc24a2Q14BI1 711 aa10.13□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Rab26Q504M8 260 aa10.13□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Spa17Q62252 149 aa10.13□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Fkbp5Q64378 456 aa10.13□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Olfr295Q7TS08 309 aa10.13□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Dennd6aQ8BH65 605 aa10.13□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Rnf41Q8BH75 317 aa10.13□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Tspan14Q8QZY6 270 aa10.13□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Ccdc58Q8R3Q6 144 aa10.13□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Hdhd5Q91WM2 419 aa10.13□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Rnf167Q91XF4 347 aa10.13□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Pabpc6Q9D4E6 643 aaKnown RBP10.13□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 NosipQ9D6T0 301 aaKnown RBP10.13□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Grk1Q9WVL4 564 aa10.13□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Zmynd8A2A484 1235 aaKnown RBP10.13□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Lcn11A2BHR2 178 aa10.13□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Gbp4A4UUI3 631 aa10.13□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Arhgap36B1AUC7 590 aa10.13□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 March10E9PX79 788 aa10.13□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Gm13128L7MU96 475 aa10.13□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Matn2O08746 956 aa10.13□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Kcnh2O35219 1162 aa10.13□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Mmp15O54732 657 aa10.13□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 EpoP07321 192 aa10.13□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Sult2a2P50236 285 aa10.13□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Jdp2P97875 163 aa10.13□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Serpina1cQ00896 412 aa10.13□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 PcQ05920 1178 aa10.13□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Snx25Q3ZT31 840 aa10.13□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Mars2Q499X9 586 aaKnown RBP10.13□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Krt72Q6IME9 520 aa10.13□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Retreg1dQ8VE91 480 aa10.13□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Cyp2c70Q91W64 489 aa10.13□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Tspan1Q99J59 240 aa10.13□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Ggt7Q99JP7 662 aa10.13□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Actrt2Q9D9L5 377 aa10.13□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Znf287Q9EQB9 759 aa10.13□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 PolhQ9JJN0 694 aa10.13□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Uchl3Q9JKB1 230 aa10.13□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Pdpk1Q9Z2A0 559 aa10.13□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Prdm14E9Q3T6 561 aa10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Nccrp1G3X9C2 266 aa10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Gm21833J3QPK1 500 aa10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Calm1P0DP26 149 aaKnown RBP10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Calm2P0DP27 149 aaKnown RBP10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Calm3P0DP28 149 aaKnown RBP10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Zfy2P20662 777 aa10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 EsrrgP62509 458 aa10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Txnl4aP83877 142 aa10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Glt6d1Q2NKH9 311 aa10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Eepd1Q3TGW2 569 aa10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Prmt9Q3U3W5 846 aa10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 OtulinQ3UCV8 352 aa10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 MycbpapQ5SUV2 932 aa10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Nab1Q61122 486 aa10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Slc9a1Q61165 820 aa10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Rxfp1Q6R6I7 758 aa10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Olfml2aQ8BHP7 681 aa10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 MtbpQ8BJS8 894 aaKnown RBP10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Eme1Q8BJW7 570 aa10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Btbd7Q8CFE5 1130 aa10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Ago3Q8CJF9 860 aa10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Guca1bQ8VBV8 201 aa10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Ttc8Q8VD72 515 aa10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Dapk2Q8VDF3 370 aa10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Sorcs3Q8VI51 1219 aa10.12□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 19.9 ms