RNA–Protein interactions for RNA: ENSMUST00000071057.13

Ddx55-201, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx55, Length 2,799 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-201ENSMUST00000071057 Taco1Q8K0Z7 294 aaKnown RBP11.89□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Elp3Q9CZX0 547 aa11.89□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Prg3Q9JL95 222 aa11.89□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Dpy19l4A2AJQ3 722 aa11.89□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Impa1O55023 277 aa11.89□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Art2aP17981 287 aa11.89□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Serpinh1P19324 417 aaKnown RBP11.89□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Cdh8P97291 799 aa11.89□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Pou2f2Q00196 463 aa11.89□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Fam189a2Q4FZH1 290 aa11.89□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Mbtd1Q6P5G3 631 aa11.89□□□□□ -0.51
Ddx55-201ENSMUST00000071057 GmipQ6PGG2 971 aa11.89□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Q8BGC1 442 aa11.89□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Fsd1lQ8BYN5 507 aa11.89□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Cfap36Q8C6E0 343 aa11.89□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Ccdc134Q8C7V8 229 aa11.89□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Cog3Q8CI04 820 aa11.89□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Slc35c2Q8VCX2 364 aa11.89□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Pcdha9Q91Y11 979 aa11.89□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Orc1Q9Z1N2 840 aaKnown RBP11.89□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Btbd19S4R1I0 287 aa11.89□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Col24a1Q30D77 1733 aa11.89□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Bpifb9bA2AJD1 591 aa11.88□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Trdmt1O55055 415 aa11.88□□□□□ -0.51
Ddx55-201ENSMUST00000071057 TxnP10639 105 aaKnown RBP11.88□□□□□ -0.51
Ddx55-201ENSMUST00000071057 PkmP52480 531 aaKnown RBP11.88□□□□□ -0.51
Ddx55-201ENSMUST00000071057 DmpkP54265 631 aa11.88□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Tfdp1Q08639 410 aa11.88□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Snx27Q3UHD6 539 aa11.88□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Znf583Q3V080 568 aa11.88□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Adad1Q5SUE7 619 aa11.88□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Ppp2r5eQ61151 467 aa11.88□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Q6GQV0 436 aa11.88□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Ccdc117Q6PB51 277 aa11.88□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Mtmr10Q7TPM9 771 aa11.88□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Crybg3Q80W49 1005 aa11.88□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Zbed4Q80WQ9 1168 aa11.88□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Ubap2lQ80X50 1107 aaKnown RBP11.88□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Bpifb9aQ80XI7 591 aa11.88□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Trnp1Q80ZI1 223 aa11.88□□□□□ -0.51
Ddx55-201ENSMUST00000071057 FsbpQ8BKE5 299 aa11.88□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Il33Q8BVZ5 266 aa11.88□□□□□ -0.51
Ddx55-201ENSMUST00000071057 CgasQ8C6L5 507 aa11.88□□□□□ -0.51
Ddx55-201ENSMUST00000071057 P3h4Q8K2B0 443 aa11.88□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Angel1Q8VCU0 667 aa11.88□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Pcdhac2Q91Y09 1006 aa11.88□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Grhl1Q921D9 618 aa11.88□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Pdxdc1Q99K01 787 aaKnown RBP11.88□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Ddx24Q9ESV0 857 aaKnown RBP11.88□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Fmnl1Q9JL26 1094 aa11.88□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Robo3Q9Z2I4 1366 aa11.88□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Gm29133A0A1B0GT72 266 aa11.88□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Mocs3A2BDX3 460 aaKnown RBP11.88□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Tatdn2B7ZNL9 783 aaKnown RBP11.88□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Gimd1E9PW74 217 aa11.88□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Chrna1P04756 457 aa11.88□□□□□ -0.51
Ddx55-201ENSMUST00000071057 RalaP63321 206 aa11.88□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Sox13Q04891 613 aa11.88□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Ahcyl2Q68FL4 613 aaKnown RBP11.88□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Bmp3Q8BHE5 468 aa11.88□□□□□ -0.51
Ddx55-201ENSMUST00000071057 PdhxQ8BKZ9 501 aa11.88□□□□□ -0.51
Ddx55-201ENSMUST00000071057 LgsnQ8CIX8 563 aa11.88□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Adgrg2Q8CJ12 1009 aa11.88□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Ccdc137Q8R0K4 290 aaKnown RBP11.88□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Dtnbp1Q91WZ8 352 aa11.88□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Abcf2Q99LE6 628 aaKnown RBP11.88□□□□□ -0.51
Ddx55-201ENSMUST00000071057 CatsperzQ9CQP8 194 aa11.88□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Dkc1Q9ESX5 509 aaKnown RBP11.88□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Ptp4a2O70274 167 aa11.87□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Phka1P18826 1241 aa11.87□□□□□ -0.51
Ddx55-201ENSMUST00000071057 InaP46660 501 aa11.87□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Pax7P47239 503 aa11.87□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Tmod1P49813 359 aa11.87□□□□□ -0.51
Ddx55-201ENSMUST00000071057 OsbpQ3B7Z2 805 aa11.87□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Gm1587Q3UT80 123 aa11.87□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Gm10488Q4KL05 212 aa11.87□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Etaa1Q5SVT3 877 aa11.87□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Tmcc1Q69ZZ6 649 aa11.87□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Tdpoz2Q717B2 364 aa11.87□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Rpf1Q7TND5 349 aaKnown RBP11.87□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Qsox1Q8BND5 748 aa11.87□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Neto2Q8BNJ6 525 aa11.87□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Fam83aQ8K2P2 436 aa11.87□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Itm2cQ91VK4 269 aa11.87□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Ivns1abpQ920Q8 642 aa11.87□□□□□ -0.51
Ddx55-201ENSMUST00000071057 CtsfQ9R013 462 aa11.87□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Slc7a5Q9Z127 512 aa11.87□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Atp6v0a1Q9Z1G4 839 aaKnown RBP11.87□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Gm13084A2A8N0 494 aa11.87□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Fam171a1A2ATK9 892 aa11.87□□□□□ -0.51
Ddx55-201ENSMUST00000071057 PotegA5H0M4 473 aa11.87□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Apol7bB1AQP7 369 aa11.87□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Zfp362B1ASA5 418 aa11.87□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Mroh5E9PUJ8 762 aa11.87□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Srpk1O70551 648 aaKnown RBP11.87□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Tnnc2P20801 160 aa11.87□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Igfbp4P47879 254 aa11.87□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Agbl1Q09M05 972 aa11.87□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Pnpla5Q32LZ8 432 aa11.87□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Fam198aQ3UY90 562 aa11.87□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 40.4 ms