RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Camkk2Q8C078 588 aa10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 AgpsQ8C0I1 645 aa10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Atg16l1Q8C0J2 607 aa10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 N4bp3Q8C7U1 537 aa10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Cep57Q8CEE0 500 aa10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Clip4Q8CI96 704 aa10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Psip1Q99JF8 528 aaKnown RBP10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Psmd6Q99JI4 389 aa10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Hars2Q99KK9 505 aa10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Rps6ka2Q9WUT3 733 aa10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Krt16Q9Z2K1 469 aa10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Mup10A2BIN1 180 aa10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Mup14A2CEK7 180 aa10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Skint3A7TZF0 458 aa10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Mup19A9C497 187 aa10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Mup15A9R9W0 180 aa10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Mup17B5X0G2 180 aa10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Mup8E9PVW0 235 aa10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Mup7E9QA79 235 aa10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Vti1aO89116 217 aa10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Mup6P02762 180 aa10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Mup1P11588 180 aa10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Mup2P11589 180 aa10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Cyp2b9P12790 491 aa10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Rpl22P67984 128 aaKnown RBP10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Srebf2Q3U1N2 1130 aa10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Kctd8Q50H33 476 aa10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Tgoln2Q62314 363 aa10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Wdr91Q7TMQ7 748 aa10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Tubgcp5Q8BKN5 1024 aa10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Rps6kc1Q8BLK9 1056 aa10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Pgm5Q8BZF8 567 aa10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Dcun1d2Q8BZJ7 259 aa10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Lars2Q8VDC0 902 aa10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Q9CYI0 393 aa10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Rnf225Q9D7D1 332 aa10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 PnkpQ9JLV6 522 aaKnown RBP10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Gabbr1Q9WV18 960 aa10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Ptgdr2Q9Z2J6 382 aa10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Cyp2t4E9PWV0 503 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Prdm15E9Q8T2 1174 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Gm10250G3X9L6 160 aaKnown RBP10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Nek2O35942 443 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Mmp10O55123 476 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Cd70O55237 195 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Mxi1P50540 228 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Hsd17b2P51658 381 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Clcn3P51791 818 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Mfsd14aP70187 490 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 FerP70451 823 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Tfdp1Q08639 410 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Heatr9Q5QNV8 569 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Sema5bQ60519 1093 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Chi3l1Q61362 389 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Txndc8Q69AB2 127 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Ckap2lQ7TS74 745 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Hdac7Q8C2B3 938 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Q8CIL4 281 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 FktnQ8R507 461 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Pcdhb2Q91Y00 799 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Pcdha9Q91Y11 979 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Rpa3Q9CQ71 121 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Ppil2Q9D787 521 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Fundc1Q9DB70 155 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Atp5hQ9DCX2 161 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Dgcr8Q9EQM6 773 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Rtl9Q32KG4 1339 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Pcdh9F8VPK8 1237 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 EsrraO08580 422 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Mtco1P00397 514 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Tgfb2P27090 414 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Slc17a7Q3TXX4 560 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Znf507Q6ZPY5 941 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Nipa1Q8BHK1 323 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Pum3Q8BKS9 647 aaKnown RBP10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Taf5Q8C092 801 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Znf426Q8R1D1 550 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Micu3Q9CTY5 523 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Tmem81Q9D5K1 259 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Gtf3c6Q9D8P7 227 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Rsph3bQ9DA80 389 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Anxa9Q9JHQ0 345 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Sept6Q9R1T4 434 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Kiaa1522A2A7S8 1013 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Tada2bD3Z4Z0 420 aaKnown RBP10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Klf6O08584 283 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Galnt4O08832 578 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Kcna3P16390 528 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Glud1P26443 558 aaKnown RBP10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 PdgfraP26618 1089 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Calb2Q08331 271 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Zbtb14Q08376 449 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Nat8lQ3UGX3 299 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Spag6Q3V0U9 509 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Frmd5Q6P5H6 517 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Cnksr2Q80YA9 1032 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Nudt8Q9CR24 210 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 NagaQ9QWR8 415 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Siah3B2RWG3 268 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Dusp8O09112 663 aa10.14□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 32.1 ms