RNA–Protein interactions for RNA: ENSMUST00000013771.14

Trim54-201, Transcript of Tripartite motif-containing protein 54, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim54, Length 1,434 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54-201ENSMUST00000013771 Filip1Q9CS72 1211 aa18■□□□□ 0.47
Trim54-201ENSMUST00000013771 Marc1Q9CW42 340 aa18■□□□□ 0.47
Trim54-201ENSMUST00000013771 Mms19Q9D071 1031 aa18■□□□□ 0.47
Trim54-201ENSMUST00000013771 Plce1Q8K4S1 2282 aa18■□□□□ 0.47
Trim54-201ENSMUST00000013771 9630041A04RikD3Z3U4 205 aa17.99■□□□□ 0.47
Trim54-201ENSMUST00000013771 Adrb1P34971 466 aa17.99■□□□□ 0.47
Trim54-201ENSMUST00000013771 NfkbidQ2TB02 327 aa17.99■□□□□ 0.47
Trim54-201ENSMUST00000013771 Gas2l3Q3UWW6 683 aa17.99■□□□□ 0.47
Trim54-201ENSMUST00000013771 MslnQ61468 625 aa17.99■□□□□ 0.47
Trim54-201ENSMUST00000013771 Tbc1d12Q6A039 696 aa17.99■□□□□ 0.47
Trim54-201ENSMUST00000013771 RbfaQ6P3B9 350 aa17.99■□□□□ 0.47
Trim54-201ENSMUST00000013771 Abcf1Q6P542 837 aaKnown RBP17.99■□□□□ 0.47
Trim54-201ENSMUST00000013771 Aggf1Q7TN31 711 aa17.99■□□□□ 0.47
Trim54-201ENSMUST00000013771 Chn2Q80XD1 332 aa17.99■□□□□ 0.47
Trim54-201ENSMUST00000013771 Adam29Q811Q4 763 aa17.99■□□□□ 0.47
Trim54-201ENSMUST00000013771 Scara5Q8K299 491 aa17.99■□□□□ 0.47
Trim54-201ENSMUST00000013771 Sh3d19Q91X43 789 aa17.99■□□□□ 0.47
Trim54-201ENSMUST00000013771 AjubaQ91XC0 547 aa17.99■□□□□ 0.47
Trim54-201ENSMUST00000013771 Sh2b1Q91ZM2 756 aa17.99■□□□□ 0.47
Trim54-201ENSMUST00000013771 Kif12Q9D2Z8 642 aa17.99■□□□□ 0.47
Trim54-201ENSMUST00000013771 Necab3Q9D6J4 353 aa17.99■□□□□ 0.47
Trim54-201ENSMUST00000013771 Syt10Q9R0N4 523 aa17.99■□□□□ 0.47
Trim54-201ENSMUST00000013771 Bex2Q9WTZ8 129 aa17.99■□□□□ 0.47
Trim54-201ENSMUST00000013771 Elf4Q9Z2U4 655 aa17.99■□□□□ 0.47
Trim54-201ENSMUST00000013771 Zfp292Q9Z2U2 2698 aa17.99■□□□□ 0.47
Trim54-201ENSMUST00000013771 Mindy4b-psA0A1W2P7H6 457 aa17.98■□□□□ 0.47
Trim54-201ENSMUST00000013771 Acnat1A2AKK5 416 aa17.98■□□□□ 0.47
Trim54-201ENSMUST00000013771 Ptch2O35595 1182 aa17.98■□□□□ 0.47
Trim54-201ENSMUST00000013771 Myl1P05977 188 aa17.98■□□□□ 0.47
Trim54-201ENSMUST00000013771 Abcb4P21440 1276 aa17.98■□□□□ 0.47
Trim54-201ENSMUST00000013771 Ptger3P30557 365 aa17.98■□□□□ 0.47
Trim54-201ENSMUST00000013771 Cep120Q7TSG1 988 aa17.98■□□□□ 0.47
Trim54-201ENSMUST00000013771 Sh3d21Q7TSG5 549 aa17.98■□□□□ 0.47
Trim54-201ENSMUST00000013771 Fam163bQ8BUM6 167 aa17.98■□□□□ 0.47
Trim54-201ENSMUST00000013771 Golph3lQ8R088 285 aaKnown RBP17.98■□□□□ 0.47
Trim54-201ENSMUST00000013771 Dnajc14Q921R4 703 aa17.98■□□□□ 0.47
Trim54-201ENSMUST00000013771 Brms1Q99N20 246 aa17.98■□□□□ 0.47
Trim54-201ENSMUST00000013771 PinlypQ9CQD7 212 aa17.98■□□□□ 0.47
Trim54-201ENSMUST00000013771 Tlr5Q9JLF7 859 aa17.98■□□□□ 0.47
Trim54-201ENSMUST00000013771 Cdc7Q9Z0H0 564 aa17.98■□□□□ 0.47
Trim54-201ENSMUST00000013771 Il18rapQ9Z2B1 614 aa17.98■□□□□ 0.47
Trim54-201ENSMUST00000013771 Fam129cD3YZB0 591 aa17.98■□□□□ 0.47
Trim54-201ENSMUST00000013771 BC051665E9Q623 330 aa17.98■□□□□ 0.47
Trim54-201ENSMUST00000013771 LipiF6YQT7 476 aa17.98■□□□□ 0.47
Trim54-201ENSMUST00000013771 Zfy1P10925 782 aa17.98■□□□□ 0.47
Trim54-201ENSMUST00000013771 Senp1P59110 640 aa17.98■□□□□ 0.47
Trim54-201ENSMUST00000013771 Irf7P70434 457 aa17.98■□□□□ 0.47
Trim54-201ENSMUST00000013771 Ssrp1Q08943 708 aaKnown RBP17.98■□□□□ 0.47
Trim54-201ENSMUST00000013771 Pank2Q3U4S0 443 aa17.98■□□□□ 0.47
Trim54-201ENSMUST00000013771 Myl6Q60605 151 aaKnown RBP17.98■□□□□ 0.47
Trim54-201ENSMUST00000013771 ManeaQ6NXH2 462 aa17.98■□□□□ 0.47
Trim54-201ENSMUST00000013771 Cep135Q6P5D4 1140 aa17.98■□□□□ 0.47
Trim54-201ENSMUST00000013771 Cacna2d2Q6PHS9 1154 aa17.98■□□□□ 0.47
Trim54-201ENSMUST00000013771 Txndc16Q7TN22 820 aa17.98■□□□□ 0.47
Trim54-201ENSMUST00000013771 Luc7l2Q7TNC4 392 aaKnown RBP17.98■□□□□ 0.47
Trim54-201ENSMUST00000013771 Sdccag8Q80UF4 717 aa17.98■□□□□ 0.47
Trim54-201ENSMUST00000013771 Spon2Q8BMS2 330 aa17.98■□□□□ 0.47
Trim54-201ENSMUST00000013771 Clec4a3Q8JZX6 237 aa17.98■□□□□ 0.47
Trim54-201ENSMUST00000013771 Nol6Q8R5K4 1152 aaKnown RBP17.98■□□□□ 0.47
Trim54-201ENSMUST00000013771 Psmd2Q8VDM4 908 aa17.98■□□□□ 0.47
Trim54-201ENSMUST00000013771 Masp2Q91WP0 685 aa17.98■□□□□ 0.47
Trim54-201ENSMUST00000013771 Ces1fQ91WU0 561 aa17.98■□□□□ 0.47
Trim54-201ENSMUST00000013771 Pcdha1Q91Y21 948 aa17.98■□□□□ 0.47
Trim54-201ENSMUST00000013771 Q91Z58 1206 aa17.98■□□□□ 0.47
Trim54-201ENSMUST00000013771 FastkQ9JIX9 511 aa17.98■□□□□ 0.47
Trim54-201ENSMUST00000013771 MgaA2AWL7 3003 aaKnown RBP17.97■□□□□ 0.47
Trim54-201ENSMUST00000013771 Spag17Q5S003 2320 aa17.97■□□□□ 0.47
Trim54-201ENSMUST00000013771 Bpifb4A2BGH0 617 aa17.97■□□□□ 0.47
Trim54-201ENSMUST00000013771 Gm10717D3Z1I8 228 aa17.97■□□□□ 0.47
Trim54-201ENSMUST00000013771 Zfand4D3Z3C6 739 aa17.97■□□□□ 0.47
Trim54-201ENSMUST00000013771 Vmn1r88E9Q235 316 aa17.97■□□□□ 0.47
Trim54-201ENSMUST00000013771 Gimap9G3X987 291 aa17.97■□□□□ 0.47
Trim54-201ENSMUST00000013771 Tnfrsf11aO35305 625 aa17.97■□□□□ 0.47
Trim54-201ENSMUST00000013771 Hmga1P17095 107 aaKnown RBP17.97■□□□□ 0.47
Trim54-201ENSMUST00000013771 Trim43cP86449 446 aa17.97■□□□□ 0.47
Trim54-201ENSMUST00000013771 Mrpl10Q3TBW2 262 aaKnown RBP17.97■□□□□ 0.47
Trim54-201ENSMUST00000013771 Ric8aQ3TIR3 530 aa17.97■□□□□ 0.47
Trim54-201ENSMUST00000013771 Ice2Q3UZ18 988 aaKnown RBP17.97■□□□□ 0.47
Trim54-201ENSMUST00000013771 Creb3Q61817 404 aa17.97■□□□□ 0.47
Trim54-201ENSMUST00000013771 Fkbp3Q62446 224 aaKnown RBP17.97■□□□□ 0.47
Trim54-201ENSMUST00000013771 FukQ7TMC8 1090 aa17.97■□□□□ 0.47
Trim54-201ENSMUST00000013771 Tbx10Q810F8 385 aa17.97■□□□□ 0.47
Trim54-201ENSMUST00000013771 Slu7Q8BHJ9 585 aa17.97■□□□□ 0.47
Trim54-201ENSMUST00000013771 Samd3Q8C4H2 520 aa17.97■□□□□ 0.47
Trim54-201ENSMUST00000013771 Kcnk13Q8R1P5 405 aa17.97■□□□□ 0.47
Trim54-201ENSMUST00000013771 Ap3m2Q8R2R9 418 aa17.97■□□□□ 0.47
Trim54-201ENSMUST00000013771 Mrps2Q924T2 291 aaKnown RBP17.97■□□□□ 0.47
Trim54-201ENSMUST00000013771 Asb3Q9WV72 525 aa17.97■□□□□ 0.47
Trim54-201ENSMUST00000013771 Rhox3cA2AWM0 215 aa17.96■□□□□ 0.47
Trim54-201ENSMUST00000013771 Rhox3hL7MU37 215 aa17.96■□□□□ 0.47
Trim54-201ENSMUST00000013771 Sema4dO09126 861 aa17.96■□□□□ 0.47
Trim54-201ENSMUST00000013771 Cldn4O35054 210 aa17.96■□□□□ 0.47
Trim54-201ENSMUST00000013771 Adcy1O88444 1118 aa17.96■□□□□ 0.47
Trim54-201ENSMUST00000013771 PfklP12382 780 aa17.96■□□□□ 0.47
Trim54-201ENSMUST00000013771 Dsc3P55850 896 aa17.96■□□□□ 0.47
Trim54-201ENSMUST00000013771 Cntn3Q07409 1028 aa17.96■□□□□ 0.47
Trim54-201ENSMUST00000013771 SpoplQ2M2N2 392 aa17.96■□□□□ 0.47
Trim54-201ENSMUST00000013771 Pik3r6Q3U6Q4 756 aa17.96■□□□□ 0.47
Trim54-201ENSMUST00000013771 Rnf10Q3UIW5 804 aa17.96■□□□□ 0.47
Trim54-201ENSMUST00000013771 Ccdc61Q3UJV1 511 aa17.96■□□□□ 0.47
Retrieved 100 of 22,080 RNA–protein pairs in 20.8 ms