RNA–Protein interactions for RNA: snR53

snR53, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR53, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR53snR53 YKL102CP34249 101 aa-4.71□□□□□ -3.16
snR53snR53 SFT2P38166 215 aa-4.71□□□□□ -3.16
snR53snR53 FMC1P40491 155 aa-4.71□□□□□ -3.16
snR53snR53 ERV25P54837 211 aaKnown RBP-4.71□□□□□ -3.16
snR53snR53 YOL024WQ08172 172 aa-4.71□□□□□ -3.16
snR53snR53 TY1B-BLQ12490 1755 aa-4.72□□□□□ -3.16
snR53snR53 RTC6O14464 93 aa-4.72□□□□□ -3.17
snR53snR53 YGR017WP53210 297 aa-4.72□□□□□ -3.17
snR53snR53 ATP19P81451 68 aa-4.72□□□□□ -3.17
snR53snR53 FCF2Q12035 217 aaPredicted RBP-4.72□□□□□ -3.17
snR53snR53 YGL041C-BQ3E750 60 aa-4.72□□□□□ -3.17
snR53snR53 EFM5P53200 248 aaKnown RBP-4.73□□□□□ -3.17
snR53snR53 SHH4Q06236 168 aa-4.73□□□□□ -3.17
snR53snR53 ECM5Q03214 1411 aa-4.73□□□□□ -3.17
snR53snR53 ARG80P07249 177 aa-4.74□□□□□ -3.17
snR53snR53 RPS11AP0CX47 156 aaKnown RBP-4.74□□□□□ -3.17
snR53snR53 RPS11BP0CX48 156 aaKnown RBP-4.74□□□□□ -3.17
snR53snR53 FYV5P25585 152 aa-4.74□□□□□ -3.17
snR53snR53 PRS3P38689 320 aaKnown RBP-4.74□□□□□ -3.17
snR53snR53 GTT2Q12390 233 aa-4.74□□□□□ -3.17
snR53snR53 YRF1-2P40105 1681 aa-4.74□□□□□ -3.17
snR53snR53 AIM18P38884 321 aa-4.75□□□□□ -3.17
snR53snR53 YCL001W-AP87012 153 aa-4.75□□□□□ -3.17
snR53snR53 AHC2P25649 128 aa-4.76□□□□□ -3.17
snR53snR53 SPG1P50088 95 aa-4.76□□□□□ -3.17
snR53snR53 NAT5Q08689 176 aa-4.76□□□□□ -3.17
snR53snR53 SHU1P38751 150 aa-4.78□□□□□ -3.17
snR53snR53 YRB1P41920 201 aaKnown RBP-4.78□□□□□ -3.17
snR53snR53 CWC23P52868 283 aaPredicted RBP-4.78□□□□□ -3.17
snR53snR53 YHR050W-AQ05451 56 aa-4.78□□□□□ -3.17
snR53snR53 YDL085C-AQ3E7B7 68 aaKnown RBP-4.78□□□□□ -3.17
snR53snR53 TRX3P25372 127 aa-4.79□□□□□ -3.18
snR53snR53 RAD17P48581 401 aa-4.79□□□□□ -3.18
snR53snR53 BRP1P53194 125 aa-4.79□□□□□ -3.18
snR53snR53 PET117Q02771 107 aa-4.79□□□□□ -3.18
snR53snR53 PHB1P40961 287 aa-4.8□□□□□ -3.18
snR53snR53 TMA20P89886 181 aaPredicted RBP-4.8□□□□□ -3.18
snR53snR53 SCS22Q6Q595 175 aa-4.8□□□□□ -3.18
snR53snR53 PET20Q99373 253 aa-4.8□□□□□ -3.18
snR53snR53 RFA3P26755 122 aaKnown RBP-4.81□□□□□ -3.18
snR53snR53 RPS1AP33442 255 aaKnown RBP-4.81□□□□□ -3.18
snR53snR53 FIG1P38224 298 aa-4.81□□□□□ -3.18
snR53snR53 YAL064WP39711 94 aa-4.81□□□□□ -3.18
snR53snR53 YIL086CP40503 102 aa-4.81□□□□□ -3.18
snR53snR53 RPC10P40422 70 aa-4.82□□□□□ -3.18
snR53snR53 FMP32P43557 207 aa-4.82□□□□□ -3.18
snR53snR53 RPS1BP23248 255 aaKnown RBP-4.83□□□□□ -3.18
snR53snR53 TAH1P25638 111 aaPredicted RBP-4.84□□□□□ -3.18
snR53snR53 YGR025WP53216 100 aa-4.84□□□□□ -3.18
snR53snR53 YPK9Q12697 1472 aa-4.85□□□□□ -3.19
snR53snR53 YGL149WP53116 101 aa-4.85□□□□□ -3.19
snR53snR53 RPL22AP05749 121 aaKnown RBP-4.86□□□□□ -3.19
snR53snR53 YAP3P38749 330 aa-4.86□□□□□ -3.19
snR53snR53 SOM1Q05676 74 aa-4.86□□□□□ -3.19
snR53snR53 CAT8P39113 1433 aa-4.87□□□□□ -3.19
snR53snR53 YUH1P35127 236 aa-4.87□□□□□ -3.19
snR53snR53 NOC4Q06512 552 aaPredicted RBP-4.87□□□□□ -3.19
snR53snR53 RRT7Q07829 113 aa-4.88□□□□□ -3.19
snR53snR53 YLR046CQ12253 270 aa-4.88□□□□□ -3.19
snR53snR53 NCB2Q92317 146 aa-4.89□□□□□ -3.19
snR53snR53 NHP6BP11633 99 aaKnown RBP-4.9□□□□□ -3.19
snR53snR53 HAP3P13434 144 aa-4.9□□□□□ -3.19
snR53snR53 ATP5P09457 212 aa-4.91□□□□□ -3.2
snR53snR53 YJL218WP40892 196 aaKnown RBP-4.91□□□□□ -3.2
snR53snR53 PKR1Q03880 122 aaKnown RBP-4.91□□□□□ -3.2
snR53snR53 RAF1Q06891 181 aa-4.91□□□□□ -3.2
snR53snR53 HPT1Q04178 221 aaKnown RBP-4.92□□□□□ -3.2
snR53snR53 PEX11Q12462 236 aa-4.92□□□□□ -3.2
snR53snR53 COX19Q3E731 98 aa-4.92□□□□□ -3.2
snR53snR53 YJR107C-AP0CT86 78 aa-4.93□□□□□ -3.2
snR53snR53 SEC72P39742 193 aaKnown RBP-4.93□□□□□ -3.2
snR53snR53 DDP1Q99321 188 aaKnown RBP-4.93□□□□□ -3.2
snR53snR53 HTB1P02293 131 aaKnown RBP-4.94□□□□□ -3.2
snR53snR53 HTB2P02294 131 aa-4.94□□□□□ -3.2
snR53snR53 MRPL38P35996 138 aaPredicted RBP-4.94□□□□□ -3.2
snR53snR53 MPC2P38857 129 aa-4.95□□□□□ -3.2
snR53snR53 YER085CP40058 173 aa-4.95□□□□□ -3.2
snR53snR53 YMR001C-AQ8TGS9 76 aa-4.95□□□□□ -3.2
snR53snR53 YKL044WP36092 106 aa-4.96□□□□□ -3.2
snR53snR53 NVJ1P38881 321 aa-4.96□□□□□ -3.2
snR53snR53 TOP2P06786 1428 aaKnown RBP-4.97□□□□□ -3.2
snR53snR53 UBI4P0CG63 381 aaKnown RBP-4.97□□□□□ -3.21
snR53snR53 YCL048W-AQ2V2Q2 79 aa-4.97□□□□□ -3.21
snR53snR53 RPL36BO14455 100 aaKnown RBP-4.98□□□□□ -3.21
snR53snR53 RPL36AP05745 100 aaPredicted RBP-4.98□□□□□ -3.21
snR53snR53 MRPL44P19956 98 aa-4.98□□□□□ -3.21
snR53snR53 TRR1P29509 319 aaKnown RBP-4.98□□□□□ -3.21
snR53snR53 YET3Q07451 203 aa-4.98□□□□□ -3.21
snR53snR53 GRX8Q05926 109 aa-4.99□□□□□ -3.21
snR53snR53 YPL261CQ08976 102 aa-4.99□□□□□ -3.21
snR53snR53 QCR2P07257 368 aa-5□□□□□ -3.21
snR53snR53 YCL012CQ8J0M4 134 aa-5□□□□□ -3.21
snR53snR53 MEC1P38111 2368 aa-5□□□□□ -3.21
snR53snR53 RPO21P04050 1733 aaKnown RBP-5.02□□□□□ -3.21
snR53snR53 RPS28BP0C0X0 67 aaKnown RBP-5.02□□□□□ -3.21
snR53snR53 YKR041WP36134 250 aa-5.02□□□□□ -3.21
snR53snR53 YLR118CQ12354 227 aa-5.02□□□□□ -3.21
snR53snR53 TY1B-DR5P0C2I2 1755 aa-5.03□□□□□ -3.21
snR53snR53 TY1B-DR6P0C2I3 1755 aa-5.03□□□□□ -3.21
snR53snR53 TY1B-LR2P0C2I5 1755 aa-5.03□□□□□ -3.21
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms