RNA–Protein interactions for RNA: YPL178W

CBC2, Transcript of Small subunit of the heterodimeric cap binding complex with Sto1p, yeast

Gene CBC2, Length 627 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CBC2	YPL178W	SME1	Q12330	94 aa	Predicted RBP	4.14	□□□□□ -1.75
CBC2	YPL178W	YIR021W-A	Q3E739	70 aa		4.14	□□□□□ -1.75
CBC2	YPL178W	RPS8A	P0CX39	200 aa	Known RBP	4.13	□□□□□ -1.75
CBC2	YPL178W	RPS8B	P0CX40	200 aa	Known RBP	4.13	□□□□□ -1.75
CBC2	YPL178W	HAP3	P13434	144 aa		4.13	□□□□□ -1.75
CBC2	YPL178W	MST28	P39552	234 aa		4.13	□□□□□ -1.75
CBC2	YPL178W	POG1	P40473	351 aa		4.13	□□□□□ -1.75
CBC2	YPL178W	GPI2	P46961	280 aa		4.13	□□□□□ -1.75
CBC2	YPL178W	TDA4	P47153	279 aa		4.13	□□□□□ -1.75
CBC2	YPL178W	YGL185C	P53100	379 aa		4.13	□□□□□ -1.75
CBC2	YPL178W	MST27	P53176	234 aa		4.13	□□□□□ -1.75
CBC2	YPL178W	YDR274C	P87283	123 aa		4.13	□□□□□ -1.75
CBC2	YPL178W	YLR281C	Q05863	155 aa		4.13	□□□□□ -1.75
CBC2	YPL178W	YPL162C	Q12042	273 aa		4.13	□□□□□ -1.75
CBC2	YPL178W	POM33	Q12164	279 aa		4.13	□□□□□ -1.75
CBC2	YPL178W	YLR361C-A	Q3E795	98 aa		4.13	□□□□□ -1.75
CBC2	YPL178W	ARO2	P28777	376 aa	Known RBP	4.12	□□□□□ -1.75
CBC2	YPL178W	MSK1	P32048	576 aa		4.12	□□□□□ -1.75
CBC2	YPL178W	PHD1	P36093	366 aa		4.12	□□□□□ -1.75
CBC2	YPL178W	LSM2	P38203	95 aa	Known RBP	4.12	□□□□□ -1.75
CBC2	YPL178W	FLO5	P38894	1075 aa		4.12	□□□□□ -1.75
CBC2	YPL178W	IMP2	P46972	177 aa		4.12	□□□□□ -1.75
CBC2	YPL178W	PAU4	P53427	120 aa		4.12	□□□□□ -1.75
CBC2	YPL178W	MRX11	Q03079	207 aa		4.12	□□□□□ -1.75
CBC2	YPL178W	SEN15	Q04675	128 aa		4.12	□□□□□ -1.75
CBC2	YPL178W	YPR013C	Q12145	317 aa		4.12	□□□□□ -1.75
CBC2	YPL178W	YPR145C-A	Q2V2P0	78 aa		4.12	□□□□□ -1.75
CBC2	YPL178W	COX19	Q3E731	98 aa		4.12	□□□□□ -1.75
CBC2	YPL178W	SLO1	Q3E784	85 aa		4.12	□□□□□ -1.75
CBC2	YPL178W	VMA9	Q3E7B6	73 aa		4.12	□□□□□ -1.75
CBC2	YPL178W	MDM10	P18409	493 aa		4.11	□□□□□ -1.75
CBC2	YPL178W	RPL14A	P36105	138 aa	Known RBP	4.11	□□□□□ -1.75
CBC2	YPL178W	ATG8	P38182	117 aa	RIP-Chip data	4.11	□□□□□ -1.75	not detected
CBC2	YPL178W	RPL14B	P38754	138 aa	Known RBP	4.11	□□□□□ -1.75
CBC2	YPL178W	SIM1	P40472	476 aa		4.11	□□□□□ -1.75
CBC2	YPL178W	DAN1	P47178	298 aa		4.11	□□□□□ -1.75
CBC2	YPL178W	DSK2	P48510	373 aa		4.11	□□□□□ -1.75
CBC2	YPL178W	TIM21	P53220	239 aa		4.11	□□□□□ -1.75
CBC2	YPL178W	YIP3	P53633	176 aa		4.11	□□□□□ -1.75
CBC2	YPL178W	FMP41	P53889	259 aa	Known RBP	4.11	□□□□□ -1.75
CBC2	YPL178W	IZH1	Q03419	316 aa		4.11	□□□□□ -1.75
CBC2	YPL178W	PKR1	Q03880	122 aa	Known RBP	4.11	□□□□□ -1.75
CBC2	YPL178W	GEP3	Q08622	556 aa		4.11	□□□□□ -1.75
CBC2	YPL178W	YOR011W-A	Q3E807	68 aa		4.11	□□□□□ -1.75
CBC2	YPL178W	DYN1	P36022	4092 aa		4.11	□□□□□ -1.75
CBC2	YPL178W	PAU1	P0CE88	120 aa		4.1	□□□□□ -1.75
CBC2	YPL178W	PAU14	P0CE89	120 aa		4.1	□□□□□ -1.75
CBC2	YPL178W	PAU6	P0CE90	120 aa		4.1	□□□□□ -1.75
CBC2	YPL178W	PAU18	P0CE91	120 aa		4.1	□□□□□ -1.75
CBC2	YPL178W	PAU8	P0CE92	120 aa		4.1	□□□□□ -1.75
CBC2	YPL178W	PAU11	P0CE93	120 aa		4.1	□□□□□ -1.75
CBC2	YPL178W	MRPL20	P22354	195 aa	Predicted RBP	4.1	□□□□□ -1.75
CBC2	YPL178W	MRPL28	P36527	147 aa		4.1	□□□□□ -1.75
CBC2	YPL178W	PAU13	P38725	120 aa		4.1	□□□□□ -1.75
CBC2	YPL178W	MBB1	P39534	108 aa		4.1	□□□□□ -1.75
CBC2	YPL178W	GLE2	P40066	365 aa		4.1	□□□□□ -1.75
CBC2	YPL178W	MCM22	P47167	239 aa		4.1	□□□□□ -1.75
CBC2	YPL178W	YNL184C	P53876	108 aa		4.1	□□□□□ -1.75
CBC2	YPL178W	PAU10	Q03050	120 aa		4.1	□□□□□ -1.75
CBC2	YPL178W	CNL1	Q06333	122 aa		4.1	□□□□□ -1.75
CBC2	YPL178W	PAU20	Q08322	120 aa		4.1	□□□□□ -1.75
CBC2	YPL178W	FIT2	Q08906	153 aa		4.1	□□□□□ -1.75
CBC2	YPL178W	FSF1	Q12029	327 aa	Known RBP	4.1	□□□□□ -1.75
CBC2	YPL178W	PAU9	Q3E770	120 aa		4.1	□□□□□ -1.75
CBC2	YPL178W	YNL146C-A	Q3E7Z1	64 aa		4.1	□□□□□ -1.75
CBC2	YPL178W	TAR1	Q8TGM6	124 aa		4.1	□□□□□ -1.75
CBC2	YPL178W	Q0142	Q9ZZW4	58 aa		4.1	□□□□□ -1.75
CBC2	YPL178W	MRS1	P07266	363 aa		4.09	□□□□□ -1.75
CBC2	YPL178W	RPB3	P16370	318 aa	Known RBP	4.09	□□□□□ -1.75
CBC2	YPL178W	TRS20	P38334	175 aa		4.09	□□□□□ -1.75
CBC2	YPL178W	YHR173C	P38864	112 aa		4.09	□□□□□ -1.75
CBC2	YPL178W	SNO1	Q03144	224 aa		4.09	□□□□□ -1.75
CBC2	YPL178W	LOA1	Q06508	300 aa		4.09	□□□□□ -1.75
CBC2	YPL178W	YOL160W	Q08321	113 aa		4.09	□□□□□ -1.75
CBC2	YPL178W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
CBC2	YPL178W	PRM7	Q12459	698 aa		4.09	□□□□□ -1.75
CBC2	YPL178W	RPS22A	P0C0W1	130 aa	Known RBP	4.08	□□□□□ -1.76
CBC2	YPL178W	NNK1	P36003	928 aa		4.08	□□□□□ -1.76
CBC2	YPL178W	LCB3	P47013	409 aa		4.08	□□□□□ -1.76
CBC2	YPL178W	MIC26	P50087	233 aa		4.08	□□□□□ -1.76
CBC2	YPL178W	ELC1	Q03071	99 aa		4.08	□□□□□ -1.76
CBC2	YPL178W	ADH3	P07246	375 aa	Known RBP	4.07	□□□□□ -1.76
CBC2	YPL178W	YCR023C	P25351	611 aa		4.07	□□□□□ -1.76
CBC2	YPL178W	UGX2	P32772	223 aa		4.07	□□□□□ -1.76
CBC2	YPL178W	DAD2	P36162	133 aa		4.07	□□□□□ -1.76
CBC2	YPL178W	MRPL24	P36525	258 aa	Predicted RBP	4.07	□□□□□ -1.76
CBC2	YPL178W	SRP14	P38985	146 aa		4.07	□□□□□ -1.76
CBC2	YPL178W	CYB5	P40312	120 aa		4.07	□□□□□ -1.76
CBC2	YPL178W	CYT2	Q00873	224 aa		4.07	□□□□□ -1.76
CBC2	YPL178W	ERV2	Q12284	196 aa		4.07	□□□□□ -1.76
CBC2	YPL178W	YNR034W-A	Q3E841	98 aa		4.07	□□□□□ -1.76
CBC2	YPL178W	YIL134C-A	Q45U18	67 aa		4.07	□□□□□ -1.76
CBC2	YPL178W	RPS28B	P0C0X0	67 aa	Known RBP	4.06	□□□□□ -1.76
CBC2	YPL178W	YPR170W-B	P0C5R9	85 aa		4.06	□□□□□ -1.76
CBC2	YPL178W	TIR1	P10863	254 aa		4.06	□□□□□ -1.76
CBC2	YPL178W	YER135C	P40082	130 aa		4.06	□□□□□ -1.76
CBC2	YPL178W	PRE5	P40302	234 aa	Known RBP	4.06	□□□□□ -1.76
CBC2	YPL178W	VMA21	P41806	77 aa		4.06	□□□□□ -1.76
CBC2	YPL178W	COX12	Q01519	83 aa		4.06	□□□□□ -1.76
CBC2	YPL178W	YMR244W	Q04018	355 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms