RNA–Protein interactions for RNA: YNR007C

ATG3, Transcript of E2-like enzyme, yeastyeast

Gene ATG3, Length 933 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG3YNR007C YKL070WP36087 169 aa2.12□□□□□ -2.07
ATG3YNR007C SRL3P36167 246 aa2.12□□□□□ -2.07
ATG3YNR007C BDH1P39714 382 aa2.12□□□□□ -2.07
ATG3YNR007C YER137CP40083 148 aaKnown RBP2.12□□□□□ -2.07
ATG3YNR007C HAM1P47119 197 aaKnown RBP2.12□□□□□ -2.07
ATG3YNR007C YGL185CP53100 379 aa2.12□□□□□ -2.07
ATG3YNR007C CAX4P53223 239 aa2.12□□□□□ -2.07
ATG3YNR007C DID2P69771 204 aa2.12□□□□□ -2.07
ATG3YNR007C DYN2Q02647 92 aa2.12□□□□□ -2.07
ATG3YNR007C FRQ1Q06389 190 aa2.12□□□□□ -2.07
ATG3YNR007C FCF2Q12035 217 aaPredicted RBP2.12□□□□□ -2.07
ATG3YNR007C ATG5Q12380 294 aa2.12□□□□□ -2.07
ATG3YNR007C FMP16Q12497 93 aa2.12□□□□□ -2.07
ATG3YNR007C RPS25AQ3E792 108 aaPredicted RBP2.12□□□□□ -2.07
ATG3YNR007C CDC7P06243 507 aa2.11□□□□□ -2.07
ATG3YNR007C DDI2P0CH63 225 aa2.11□□□□□ -2.07
ATG3YNR007C DDI3P0CH64 225 aa2.11□□□□□ -2.07
ATG3YNR007C RPS11AP0CX47 156 aaKnown RBP2.11□□□□□ -2.07
ATG3YNR007C RPS11BP0CX48 156 aaKnown RBP2.11□□□□□ -2.07
ATG3YNR007C CPT1P17898 393 aa2.11□□□□□ -2.07
ATG3YNR007C HSP12P22943 109 aaKnown RBP2.11□□□□□ -2.07
ATG3YNR007C AUA1P32450 94 aa2.11□□□□□ -2.07
ATG3YNR007C SHB17P36136 271 aaKnown RBP2.11□□□□□ -2.07
ATG3YNR007C SFT2P38166 215 aa2.11□□□□□ -2.07
ATG3YNR007C SHG1P38337 142 aa2.11□□□□□ -2.07
ATG3YNR007C YBR292CP38357 123 aa2.11□□□□□ -2.07
ATG3YNR007C EDC2P40023 145 aaPredicted RBP2.11□□□□□ -2.07
ATG3YNR007C SPC1P46965 94 aa2.11□□□□□ -2.07
ATG3YNR007C ATC1Q04005 294 aa2.11□□□□□ -2.07
ATG3YNR007C ARC18Q05933 178 aaKnown RBP2.11□□□□□ -2.07
ATG3YNR007C AGA2P32781 87 aa2.1□□□□□ -2.07
ATG3YNR007C YEA6P39953 335 aa2.1□□□□□ -2.07
ATG3YNR007C YEA4P40004 342 aa2.1□□□□□ -2.07
ATG3YNR007C YJR015WP47090 510 aa2.1□□□□□ -2.07
ATG3YNR007C MIC26P50087 233 aa2.1□□□□□ -2.07
ATG3YNR007C SNO1Q03144 224 aa2.1□□□□□ -2.07
ATG3YNR007C MRPS8Q03799 155 aa2.1□□□□□ -2.07
ATG3YNR007C IRC23Q08416 157 aa2.1□□□□□ -2.07
ATG3YNR007C HTB2P02294 131 aa2.09□□□□□ -2.07
ATG3YNR007C MAG1P22134 296 aaKnown RBP2.09□□□□□ -2.07
ATG3YNR007C PPQ1P32945 549 aa2.09□□□□□ -2.07
ATG3YNR007C YJL027CP47063 138 aaPredicted RBP2.09□□□□□ -2.07
ATG3YNR007C FMP41P53889 259 aaKnown RBP2.09□□□□□ -2.07
ATG3YNR007C SHH3Q04487 196 aa2.09□□□□□ -2.07
ATG3YNR007C DPP1Q05521 289 aa2.09□□□□□ -2.07
ATG3YNR007C CCW12Q12127 133 aa2.09□□□□□ -2.07
ATG3YNR007C POM33Q12164 279 aa2.09□□□□□ -2.07
ATG3YNR007C YGR240C-AQ3E786 66 aa2.09□□□□□ -2.07
ATG3YNR007C YOR011W-AQ3E807 68 aa2.09□□□□□ -2.07
ATG3YNR007C YPR010C-AA5Z2X5 72 aa2.08□□□□□ -2.08
ATG3YNR007C SPT4P32914 102 aaPredicted RBP2.08□□□□□ -2.08
ATG3YNR007C IRC22P40006 225 aa2.08□□□□□ -2.08
ATG3YNR007C YKE4P40544 346 aa2.08□□□□□ -2.08
ATG3YNR007C SMD3P43321 101 aaKnown RBP2.08□□□□□ -2.08
ATG3YNR007C IMP2P46972 177 aa2.08□□□□□ -2.08
ATG3YNR007C TIM21P53220 239 aa2.08□□□□□ -2.08
ATG3YNR007C ERI1P62651 68 aaKnown RBP2.08□□□□□ -2.08
ATG3YNR007C YCL001W-AP87012 153 aa2.08□□□□□ -2.08
ATG3YNR007C YDR366CP87287 132 aa2.08□□□□□ -2.08
ATG3YNR007C MRPS17Q03246 237 aaPredicted RBP2.08□□□□□ -2.08
ATG3YNR007C UPS3Q04006 179 aa2.08□□□□□ -2.08
ATG3YNR007C YMR082CQ04276 118 aa2.08□□□□□ -2.08
ATG3YNR007C TAR1Q8TGM6 124 aa2.08□□□□□ -2.08
ATG3YNR007C MRS1P07266 363 aa2.07□□□□□ -2.08
ATG3YNR007C YHR213WP0CI67 198 aa2.07□□□□□ -2.08
ATG3YNR007C RPB3P16370 318 aaKnown RBP2.07□□□□□ -2.08
ATG3YNR007C MRS4P23500 304 aa2.07□□□□□ -2.08
ATG3YNR007C YBR013CP38215 129 aa2.07□□□□□ -2.08
ATG3YNR007C DER1P38307 211 aa2.07□□□□□ -2.08
ATG3YNR007C AME1P38313 324 aa2.07□□□□□ -2.08
ATG3YNR007C YNL200CP40165 246 aaKnown RBP2.07□□□□□ -2.08
ATG3YNR007C COA4Q05809 96 aa2.07□□□□□ -2.08
ATG3YNR007C RDS3Q06835 107 aaPredicted RBP2.07□□□□□ -2.08
ATG3YNR007C RRT7Q07829 113 aa2.07□□□□□ -2.08
ATG3YNR007C POC4Q12245 148 aaPredicted RBP2.07□□□□□ -2.08
ATG3YNR007C PRR2Q12310 699 aa2.07□□□□□ -2.08
ATG3YNR007C UBI4P0CG63 381 aaKnown RBP2.06□□□□□ -2.08
ATG3YNR007C RNA15P25299 296 aaPredicted RBP2.06□□□□□ -2.08
ATG3YNR007C YCR025CP25352 136 aa2.06□□□□□ -2.08
ATG3YNR007C NRG2P38082 220 aa2.06□□□□□ -2.08
ATG3YNR007C YHR173CP38864 112 aa2.06□□□□□ -2.08
ATG3YNR007C SNU13P39990 126 aaKnown RBP2.06□□□□□ -2.08
ATG3YNR007C YER135CP40082 130 aa2.06□□□□□ -2.08
ATG3YNR007C CYB5P40312 120 aa2.06□□□□□ -2.08
ATG3YNR007C YIL059CP40520 121 aa2.06□□□□□ -2.08
ATG3YNR007C YFR045WP43617 309 aa2.06□□□□□ -2.08
ATG3YNR007C TAD2P47058 250 aa2.06□□□□□ -2.08
ATG3YNR007C TMA23Q03525 211 aa2.06□□□□□ -2.08
ATG3YNR007C ANT1Q06497 328 aa2.06□□□□□ -2.08
ATG3YNR007C YOL160WQ08321 113 aa2.06□□□□□ -2.08
ATG3YNR007C DAD1Q12248 94 aa2.06□□□□□ -2.08
ATG3YNR007C PRM7Q12459 698 aa2.06□□□□□ -2.08
ATG3YNR007C YAL063C-AQ3E791 96 aa2.06□□□□□ -2.08
ATG3YNR007C COA2Q3E823 68 aa2.06□□□□□ -2.08
ATG3YNR007C YMR316C-AI2HB70 103 aa2.05□□□□□ -2.08
ATG3YNR007C YHR022CP38763 256 aa2.05□□□□□ -2.08
ATG3YNR007C SPC25P40014 221 aa2.05□□□□□ -2.08
ATG3YNR007C YGR269WP40326 108 aa2.05□□□□□ -2.08
ATG3YNR007C MRPL50P53724 139 aa2.05□□□□□ -2.08
ATG3YNR007C YMR253CQ04835 414 aa2.05□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 31.1 ms