RNA–Protein interactions for RNA: YMR240C

CUS1, Transcript of Protein required for assembly of U2 snRNP into the spliceosome, yeastyeast

Gene CUS1, Length 1,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUS1YMR240C YBL010CP32788 280 aa2.5□□□□□ -2.01
CUS1YMR240C GSP1P32835 219 aaKnown RBP2.5□□□□□ -2.01
CUS1YMR240C GSP2P32836 220 aaKnown RBP2.5□□□□□ -2.01
CUS1YMR240C YHR140WP38842 239 aa2.5□□□□□ -2.01
CUS1YMR240C RPL13BP40212 199 aaKnown RBP2.5□□□□□ -2.01
CUS1YMR240C EST3Q03096 181 aa2.5□□□□□ -2.01
CUS1YMR240C LDB18Q07887 179 aa2.5□□□□□ -2.01
CUS1YMR240C RPL13AQ12690 199 aaPredicted RBP2.5□□□□□ -2.01
CUS1YMR240C YLR099W-AQ3E798 87 aa2.5□□□□□ -2.01
CUS1YMR240C IQG1Q12280 1495 aa2.5□□□□□ -2.01
CUS1YMR240C YOL162WP0CF19 215 aa2.49□□□□□ -2.01
CUS1YMR240C RRT1P38192 103 aa2.49□□□□□ -2.01
CUS1YMR240C SFT1P43682 97 aa2.49□□□□□ -2.01
CUS1YMR240C AIM36Q03798 255 aa2.49□□□□□ -2.01
CUS1YMR240C YDR102CQ03864 110 aa2.49□□□□□ -2.01
CUS1YMR240C YPL225WQ08971 146 aaKnown RBP2.49□□□□□ -2.01
CUS1YMR240C YOR289WQ12012 251 aaPredicted RBP2.49□□□□□ -2.01
CUS1YMR240C YLR118CQ12354 227 aa2.49□□□□□ -2.01
CUS1YMR240C KTI11Q3E840 82 aa2.49□□□□□ -2.01
CUS1YMR240C YSP2Q06681 1438 aa2.49□□□□□ -2.01
CUS1YMR240C HYM1P32464 399 aa2.48□□□□□ -2.01
CUS1YMR240C YRA2P36036 203 aaKnown RBP RIP-Chip data2.48□□□□□ -2.01not detected
CUS1YMR240C PAM17P36147 197 aa2.48□□□□□ -2.01
CUS1YMR240C YEL073CP39974 107 aa2.48□□□□□ -2.01
CUS1YMR240C SPG1P50088 95 aa2.48□□□□□ -2.01
CUS1YMR240C EMC4P53073 190 aa2.48□□□□□ -2.01
CUS1YMR240C LIP1Q03579 150 aa2.48□□□□□ -2.01
CUS1YMR240C YPR174CQ06616 221 aaPredicted RBP2.48□□□□□ -2.01
CUS1YMR240C FCF2Q12035 217 aaPredicted RBP2.48□□□□□ -2.01
CUS1YMR240C FYV7Q12247 151 aa2.48□□□□□ -2.01
CUS1YMR240C FAS1P07149 2051 aaKnown RBP2.48□□□□□ -2.01
CUS1YMR240C SNF2P22082 1703 aa2.48□□□□□ -2.01
CUS1YMR240C GEP7P53171 287 aa2.47□□□□□ -2.01
CUS1YMR240C YNR064CP53750 290 aa2.47□□□□□ -2.01
CUS1YMR240C TMA23Q03525 211 aa2.47□□□□□ -2.01
CUS1YMR240C DAD4P69851 72 aa2.46□□□□□ -2.02
CUS1YMR240C SAE3P89114 91 aa2.46□□□□□ -2.02
CUS1YMR240C ELC1Q03071 99 aa2.46□□□□□ -2.02
CUS1YMR240C RNH202Q05635 350 aa2.46□□□□□ -2.02
CUS1YMR240C IML1P47170 1584 aa2.46□□□□□ -2.02
CUS1YMR240C DNF3Q12674 1656 aa2.46□□□□□ -2.02
CUS1YMR240C RRP5Q05022 1729 aaKnown RBP2.46□□□□□ -2.02
CUS1YMR240C URB1P34241 1764 aaKnown RBP2.46□□□□□ -2.02
CUS1YMR240C FKS3Q04952 1785 aa2.46□□□□□ -2.02
CUS1YMR240C RPL14AP36105 138 aaKnown RBP2.45□□□□□ -2.02
CUS1YMR240C ETR1P38071 380 aa2.45□□□□□ -2.02
CUS1YMR240C RPL14BP38754 138 aaKnown RBP2.45□□□□□ -2.02
CUS1YMR240C ATP19P81451 68 aa2.45□□□□□ -2.02
CUS1YMR240C CWC27Q02770 301 aa2.45□□□□□ -2.02
CUS1YMR240C YHR007C-AQ07074 71 aa2.45□□□□□ -2.02
CUS1YMR240C ATG10Q07879 167 aa2.45□□□□□ -2.02
CUS1YMR240C UIP4Q08926 304 aa2.45□□□□□ -2.02
CUS1YMR240C PDR11P40550 1411 aa2.45□□□□□ -2.02
CUS1YMR240C MMS1Q06211 1407 aa2.45□□□□□ -2.02
CUS1YMR240C DDR48P18899 430 aaKnown RBP2.44□□□□□ -2.02
CUS1YMR240C YKR070WP36151 352 aaKnown RBP2.44□□□□□ -2.02
CUS1YMR240C MPC1P53157 130 aaKnown RBP2.44□□□□□ -2.02
CUS1YMR240C PIR1Q03178 341 aa2.44□□□□□ -2.02
CUS1YMR240C RIM9Q04734 239 aa2.44□□□□□ -2.02
CUS1YMR240C YPR013CQ12145 317 aa2.44□□□□□ -2.02
CUS1YMR240C YOR015WQ12169 119 aa2.44□□□□□ -2.02
CUS1YMR240C TY3B-IQ7LHG5 1498 aaKnown RBP2.44□□□□□ -2.02
CUS1YMR240C LTE1P07866 1435 aa2.44□□□□□ -2.02
CUS1YMR240C MDM35O60200 86 aa2.43□□□□□ -2.02
CUS1YMR240C ANB1P19211 157 aa2.43□□□□□ -2.02
CUS1YMR240C YCR101CP25607 182 aa2.43□□□□□ -2.02
CUS1YMR240C SFT2P38166 215 aa2.43□□□□□ -2.02
CUS1YMR240C YPT31P38555 223 aaKnown RBP2.43□□□□□ -2.02
CUS1YMR240C PHS1P40857 217 aa2.43□□□□□ -2.02
CUS1YMR240C PAC10P48363 199 aa2.43□□□□□ -2.02
CUS1YMR240C RPS12P48589 143 aaKnown RBP2.43□□□□□ -2.02
CUS1YMR240C YOR381W-AQ3E804 55 aa2.43□□□□□ -2.02
CUS1YMR240C RIM15P43565 1770 aa2.43□□□□□ -2.02
CUS1YMR240C YRF1-3P0CX14 1859 aa2.43□□□□□ -2.02
CUS1YMR240C YRF1-7P0CX15 1859 aa2.43□□□□□ -2.02
CUS1YMR240C YRF1-6P53819 1859 aa2.43□□□□□ -2.02
CUS1YMR240C DUR1,2P32528 1835 aaKnown RBP2.43□□□□□ -2.02
CUS1YMR240C UTP10P42945 1769 aaKnown RBP2.43□□□□□ -2.02
CUS1YMR240C TRS20P38334 175 aa2.42□□□□□ -2.02
CUS1YMR240C YHL018WP38744 120 aaPredicted RBP2.42□□□□□ -2.02
CUS1YMR240C RPB11P38902 120 aa2.42□□□□□ -2.02
CUS1YMR240C LSM8P47093 109 aaKnown RBP2.42□□□□□ -2.02
CUS1YMR240C DML1Q03652 475 aa2.42□□□□□ -2.02
CUS1YMR240C TVP18Q04767 167 aa2.42□□□□□ -2.02
CUS1YMR240C CYR1P08678 2026 aaKnown RBP2.42□□□□□ -2.02
CUS1YMR240C SPS2P08459 502 aa2.42□□□□□ -2.02
CUS1YMR240C QCR8P08525 94 aa2.42□□□□□ -2.02
CUS1YMR240C FPR1P20081 114 aaKnown RBP2.42□□□□□ -2.02
CUS1YMR240C MRS4P23500 304 aa2.42□□□□□ -2.02
CUS1YMR240C LHP1P33399 275 aaKnown RBP2.42□□□□□ -2.02
CUS1YMR240C THG1P53215 237 aaKnown RBP2.42□□□□□ -2.02
CUS1YMR240C MZM1Q03429 123 aaPredicted RBP2.42□□□□□ -2.02
CUS1YMR240C YML079WQ03629 201 aa2.42□□□□□ -2.02
CUS1YMR240C UPS3Q04006 179 aa2.42□□□□□ -2.02
CUS1YMR240C HUT1Q12520 339 aa2.42□□□□□ -2.02
CUS1YMR240C SCS22Q6Q595 175 aa2.42□□□□□ -2.02
CUS1YMR240C FAS2P19097 1887 aaKnown RBP2.41□□□□□ -2.02
CUS1YMR240C APC1P53886 1748 aa2.41□□□□□ -2.02
CUS1YMR240C COX8P04039 78 aa2.41□□□□□ -2.02
CUS1YMR240C BUD23P25627 275 aaPredicted RBP2.41□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 48.2 ms