RNA–Protein interactions for RNA: YMR026C

PEX12, Transcript of C3HC4-type RING-finger peroxin and E3 ubiquitin ligase, yeastyeast

Gene PEX12, Length 1,200 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX12YMR026C TSC11P40061 1430 aa2.42□□□□□ -2.02
PEX12YMR026C NMT1P14743 455 aa2.42□□□□□ -2.02
PEX12YMR026C MRPL44P19956 98 aa2.42□□□□□ -2.02
PEX12YMR026C HYR1P40581 163 aaKnown RBP2.42□□□□□ -2.02
PEX12YMR026C YGL230CP53074 147 aa2.42□□□□□ -2.02
PEX12YMR026C YLR042CQ07990 161 aa2.42□□□□□ -2.02
PEX12YMR026C FCF2Q12035 217 aaPredicted RBP2.42□□□□□ -2.02
PEX12YMR026C YOR376W-AQ3E805 51 aa2.42□□□□□ -2.02
PEX12YMR026C QCR8P08525 94 aa2.41□□□□□ -2.02
PEX12YMR026C UTP11P34247 250 aaPredicted RBP2.41□□□□□ -2.02
PEX12YMR026C ECM31P38122 312 aa2.41□□□□□ -2.02
PEX12YMR026C RPS12P48589 143 aaKnown RBP2.41□□□□□ -2.02
PEX12YMR026C YLR162WQ06235 118 aa2.41□□□□□ -2.02
PEX12YMR026C ANB1P19211 157 aa2.4□□□□□ -2.03
PEX12YMR026C BRP1P53194 125 aa2.4□□□□□ -2.03
PEX12YMR026C RCE1Q03530 315 aa2.4□□□□□ -2.03
PEX12YMR026C GTT2Q12390 233 aa2.4□□□□□ -2.03
PEX12YMR026C BUD4P47136 1447 aa2.4□□□□□ -2.03
PEX12YMR026C SRL3P36167 246 aa2.39□□□□□ -2.03
PEX12YMR026C YAR029WP39549 74 aa2.39□□□□□ -2.03
PEX12YMR026C GPI11Q06636 219 aa2.39□□□□□ -2.03
PEX12YMR026C YCR101CP25607 182 aa2.38□□□□□ -2.03
PEX12YMR026C YCR099CP25657 155 aa2.38□□□□□ -2.03
PEX12YMR026C YEL008WP40001 126 aa2.38□□□□□ -2.03
PEX12YMR026C DCV1P43595 202 aa2.38□□□□□ -2.03
PEX12YMR026C YFR035CP43608 114 aa2.38□□□□□ -2.03
PEX12YMR026C NAT5Q08689 176 aa2.38□□□□□ -2.03
PEX12YMR026C YOR289WQ12012 251 aaPredicted RBP2.38□□□□□ -2.03
PEX12YMR026C FYV7Q12247 151 aa2.38□□□□□ -2.03
PEX12YMR026C RIF1P29539 1916 aa2.37□□□□□ -2.03
PEX12YMR026C PAU21P0CE86 164 aa2.37□□□□□ -2.03
PEX12YMR026C PAU22P0CE87 164 aa2.37□□□□□ -2.03
PEX12YMR026C YCL042WP25572 119 aa2.37□□□□□ -2.03
PEX12YMR026C RTR2Q12378 196 aa2.37□□□□□ -2.03
PEX12YMR026C TAR1Q8TGM6 124 aa2.37□□□□□ -2.03
PEX12YMR026C TRM732Q03496 1420 aa2.36□□□□□ -2.03
PEX12YMR026C FPR1P20081 114 aaKnown RBP2.36□□□□□ -2.03
PEX12YMR026C YGL010WP25338 174 aa2.36□□□□□ -2.03
PEX12YMR026C YKL044WP36092 106 aa2.36□□□□□ -2.03
PEX12YMR026C CWC27Q02770 301 aa2.36□□□□□ -2.03
PEX12YMR026C YNL146C-AQ3E7Z1 64 aa2.36□□□□□ -2.03
PEX12YMR026C SEC59P20048 519 aa2.35□□□□□ -2.03
PEX12YMR026C PAM16P42949 149 aa2.35□□□□□ -2.03
PEX12YMR026C YAE1P47118 141 aaPredicted RBP2.35□□□□□ -2.03
PEX12YMR026C ERV14P53173 138 aa2.35□□□□□ -2.03
PEX12YMR026C OCA6Q12454 224 aa2.35□□□□□ -2.03
PEX12YMR026C FUN14P18411 198 aa2.34□□□□□ -2.03
PEX12YMR026C RPL13BP40212 199 aaKnown RBP2.34□□□□□ -2.03
PEX12YMR026C YGR164WP53291 111 aa2.34□□□□□ -2.03
PEX12YMR026C RPL13AQ12690 199 aaPredicted RBP2.34□□□□□ -2.03
PEX12YMR026C HAP3P13434 144 aa2.33□□□□□ -2.04
PEX12YMR026C HYP2P23301 157 aaKnown RBP2.33□□□□□ -2.04
PEX12YMR026C YPL067CQ02754 198 aa2.33□□□□□ -2.04
PEX12YMR026C RTC6O14464 93 aa2.32□□□□□ -2.04
PEX12YMR026C VAR1P02381 398 aa2.32□□□□□ -2.04
PEX12YMR026C PRE1P22141 198 aaKnown RBP2.32□□□□□ -2.04
PEX12YMR026C EMP24P32803 203 aaKnown RBP2.32□□□□□ -2.04
PEX12YMR026C HSP10P38910 106 aa2.32□□□□□ -2.04
PEX12YMR026C SNF11P38956 169 aa2.32□□□□□ -2.04
PEX12YMR026C YFL051CP43552 160 aa2.32□□□□□ -2.04
PEX12YMR026C GNA1P43577 159 aaPredicted RBP2.32□□□□□ -2.04
PEX12YMR026C YGL149WP53116 101 aa2.32□□□□□ -2.04
PEX12YMR026C GPI19Q04082 140 aa2.32□□□□□ -2.04
PEX12YMR026C YPL225WQ08971 146 aaKnown RBP2.32□□□□□ -2.04
PEX12YMR026C YBR090CP38253 122 aa2.31□□□□□ -2.04
PEX12YMR026C VAM10Q08474 114 aa2.31□□□□□ -2.04
PEX12YMR026C COA3Q3E7B2 85 aa2.31□□□□□ -2.04
PEX12YMR026C UBC5P15732 148 aa2.3□□□□□ -2.04
PEX12YMR026C BUD23P25627 275 aaPredicted RBP2.3□□□□□ -2.04
PEX12YMR026C YLR296WQ05898 108 aa2.3□□□□□ -2.04
PEX12YMR026C CYR1P08678 2026 aaKnown RBP2.3□□□□□ -2.04
PEX12YMR026C PDR11P40550 1411 aa2.29□□□□□ -2.04
PEX12YMR026C TDA2P40045 126 aa2.29□□□□□ -2.04
PEX12YMR026C SED1Q01589 338 aa2.29□□□□□ -2.04
PEX12YMR026C RPL40AP0CH08 128 aaKnown RBP2.28□□□□□ -2.04
PEX12YMR026C RPL40BP0CH09 128 aaKnown RBP2.28□□□□□ -2.04
PEX12YMR026C AIM18P38884 321 aa2.28□□□□□ -2.04
PEX12YMR026C YEA6P39953 335 aa2.28□□□□□ -2.04
PEX12YMR026C KRE5P22023 1365 aa2.27□□□□□ -2.05
PEX12YMR026C HAP2P06774 265 aa2.27□□□□□ -2.05
PEX12YMR026C YJL197C-AP0C5P0 93 aa2.27□□□□□ -2.05
PEX12YMR026C YHR213WP0CI67 198 aa2.27□□□□□ -2.05
PEX12YMR026C MRPL11P36521 249 aaPredicted RBP2.27□□□□□ -2.05
PEX12YMR026C YBR027CP38220 110 aa2.27□□□□□ -2.05
PEX12YMR026C FIT1Q04433 528 aa2.27□□□□□ -2.05
PEX12YMR026C YLR365WQ7LIF2 110 aa2.27□□□□□ -2.05
PEX12YMR026C MED11Q99278 115 aa2.27□□□□□ -2.05
PEX12YMR026C YGL014C-AP0C5N1 53 aa2.26□□□□□ -2.05
PEX12YMR026C YER187WP40102 141 aa2.26□□□□□ -2.05
PEX12YMR026C YMR103CQ04436 120 aa2.26□□□□□ -2.05
PEX12YMR026C MHF1Q3E835 90 aa2.26□□□□□ -2.05
PEX12YMR026C SKI3P17883 1432 aaKnown RBP2.25□□□□□ -2.05
PEX12YMR026C ACC1Q00955 2233 aaKnown RBP2.25□□□□□ -2.05
PEX12YMR026C RPL33AP05744 107 aaKnown RBP2.25□□□□□ -2.05
PEX12YMR026C YPL261CQ08976 102 aa2.25□□□□□ -2.05
PEX12YMR026C TY3B-IQ7LHG5 1498 aaKnown RBP2.25□□□□□ -2.05
PEX12YMR026C GEA1P47102 1408 aaPredicted RBP2.25□□□□□ -2.05
PEX12YMR026C YBR242WP38331 238 aa2.24□□□□□ -2.05
PEX12YMR026C YHR130CP38834 111 aa2.24□□□□□ -2.05
PEX12YMR026C LST8P41318 303 aa2.24□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 27.6 ms