RNA–Protein interactions for RNA: YLR412W

BER1, Transcript of Protein involved in microtubule-related processes, yeastyeast

Gene BER1, Length 825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BER1YLR412W PFY1P07274 126 aa-0.34□□□□□ -2.46
BER1YLR412W RME1P32338 300 aaKnown RBP-0.34□□□□□ -2.46
BER1YLR412W SFT2P38166 215 aa-0.34□□□□□ -2.46
BER1YLR412W YPL067CQ02754 198 aa-0.34□□□□□ -2.46
BER1YLR412W NAT5Q08689 176 aa-0.34□□□□□ -2.46
BER1YLR412W EFG1Q3E705 233 aaKnown RBP-0.34□□□□□ -2.46
BER1YLR412W YSF3P0C074 85 aaPredicted RBP-0.35□□□□□ -2.47
BER1YLR412W POR2P40478 281 aa-0.35□□□□□ -2.47
BER1YLR412W DDP1Q99321 188 aaKnown RBP-0.35□□□□□ -2.47
BER1YLR412W TY4B-JP47024 1803 aa-0.36□□□□□ -2.47
BER1YLR412W MRPL31P14063 131 aaPredicted RBP-0.36□□□□□ -2.47
BER1YLR412W AUA1P32450 94 aa-0.36□□□□□ -2.47
BER1YLR412W RAF1Q06891 181 aa-0.36□□□□□ -2.47
BER1YLR412W BRR2P32639 2163 aaKnown RBP-0.37□□□□□ -2.47
BER1YLR412W NSL1Q12143 216 aa-0.37□□□□□ -2.47
BER1YLR412W AME1P38313 324 aa-0.38□□□□□ -2.47
BER1YLR412W YGR201CP42936 225 aa-0.38□□□□□ -2.47
BER1YLR412W YJR128WP47162 119 aa-0.38□□□□□ -2.47
BER1YLR412W BRP1P53194 125 aa-0.38□□□□□ -2.47
BER1YLR412W YOR385WQ08909 290 aa-0.38□□□□□ -2.47
BER1YLR412W CMC2Q3E7A4 109 aa-0.38□□□□□ -2.47
BER1YLR412W YRF1-3P0CX14 1859 aa-0.39□□□□□ -2.47
BER1YLR412W YRF1-7P0CX15 1859 aa-0.39□□□□□ -2.47
BER1YLR412W TY1B-HO13535 1793 aa-0.39□□□□□ -2.47
BER1YLR412W DER1P38307 211 aa-0.39□□□□□ -2.47
BER1YLR412W YFR035CP43608 114 aa-0.39□□□□□ -2.47
BER1YLR412W SEC16P48415 2195 aaKnown RBP-0.4□□□□□ -2.47
BER1YLR412W YLR296WQ05898 108 aa-0.4□□□□□ -2.47
BER1YLR412W YOL164W-AQ3E7A5 60 aa-0.4□□□□□ -2.47
BER1YLR412W LSM1P47017 172 aaKnown RBP-0.41□□□□□ -2.48
BER1YLR412W POL2P21951 2222 aaKnown RBP-0.41□□□□□ -2.48
BER1YLR412W RTC6O14464 93 aa-0.42□□□□□ -2.48
BER1YLR412W MRPL11P36521 249 aaPredicted RBP-0.42□□□□□ -2.48
BER1YLR412W FIG1P38224 298 aa-0.42□□□□□ -2.48
BER1YLR412W YGL149WP53116 101 aa-0.42□□□□□ -2.48
BER1YLR412W MRPL44P19956 98 aa-0.43□□□□□ -2.48
BER1YLR412W LSM8P47093 109 aaKnown RBP-0.43□□□□□ -2.48
BER1YLR412W YDR010CQ12426 110 aa-0.43□□□□□ -2.48
BER1YLR412W MED11Q99278 115 aa-0.43□□□□□ -2.48
BER1YLR412W SRX1P36077 127 aa-0.44□□□□□ -2.48
BER1YLR412W YEA6P39953 335 aa-0.44□□□□□ -2.48
BER1YLR412W COF1Q03048 143 aaKnown RBP-0.44□□□□□ -2.48
BER1YLR412W ATP14Q12349 124 aa-0.44□□□□□ -2.48
BER1YLR412W GTT2Q12390 233 aa-0.44□□□□□ -2.48
BER1YLR412W CHD1P32657 1468 aa-0.44□□□□□ -2.48
BER1YLR412W EMP24P32803 203 aaKnown RBP-0.45□□□□□ -2.48
BER1YLR412W RPS1AP33442 255 aaKnown RBP-0.45□□□□□ -2.48
BER1YLR412W AIM18P38884 321 aa-0.45□□□□□ -2.48
BER1YLR412W ARL3Q02804 198 aa-0.45□□□□□ -2.48
BER1YLR412W SNT2P53127 1403 aa-0.46□□□□□ -2.48
BER1YLR412W SUI1P32911 108 aaKnown RBP-0.46□□□□□ -2.48
BER1YLR412W LCL1Q02786 101 aa-0.46□□□□□ -2.48
BER1YLR412W LDB18Q07887 179 aa-0.46□□□□□ -2.48
BER1YLR412W SUA7P29055 345 aaPredicted RBP-0.47□□□□□ -2.48
BER1YLR412W SPG1P50088 95 aa-0.47□□□□□ -2.48
BER1YLR412W GSP1P32835 219 aaKnown RBP-0.48□□□□□ -2.49
BER1YLR412W HAP3P13434 144 aa-0.49□□□□□ -2.49
BER1YLR412W QCR10P37299 77 aa-0.49□□□□□ -2.49
BER1YLR412W YIL163CP40448 117 aa-0.49□□□□□ -2.49
BER1YLR412W HHO1P53551 258 aa-0.49□□□□□ -2.49
BER1YLR412W FCF2Q12035 217 aaPredicted RBP-0.49□□□□□ -2.49
BER1YLR412W YHR173CP38864 112 aa-0.5□□□□□ -2.49
BER1YLR412W YNL190WP53872 204 aa-0.5□□□□□ -2.49
BER1YLR412W RAV2Q03956 351 aa-0.5□□□□□ -2.49
BER1YLR412W ENV10Q99382 181 aa-0.5□□□□□ -2.49
BER1YLR412W TY4B-HP0C2J7 1802 aa-0.5□□□□□ -2.49
BER1YLR412W SEC7P11075 2009 aaKnown RBP-0.5□□□□□ -2.49
BER1YLR412W RPA12P32529 125 aaKnown RBP-0.51□□□□□ -2.49
BER1YLR412W PET20Q99373 253 aa-0.51□□□□□ -2.49
BER1YLR412W EFM5P53200 248 aaKnown RBP-0.52□□□□□ -2.49
BER1YLR412W YGR017WP53210 297 aa-0.52□□□□□ -2.49
BER1YLR412W YGR240C-AQ3E786 66 aa-0.52□□□□□ -2.49
BER1YLR412W HSP10P38910 106 aa-0.53□□□□□ -2.49
BER1YLR412W VPS55P47111 140 aa-0.53□□□□□ -2.49
BER1YLR412W PKR1Q03880 122 aaKnown RBP-0.53□□□□□ -2.49
BER1YLR412W SDH7Q04401 133 aa-0.53□□□□□ -2.49
BER1YLR412W HPA2Q06592 156 aa-0.53□□□□□ -2.49
BER1YLR412W OCA6Q12454 224 aa-0.53□□□□□ -2.49
BER1YLR412W URB1P34241 1764 aaKnown RBP-0.53□□□□□ -2.49
BER1YLR412W PAU21P0CE86 164 aa-0.54□□□□□ -2.5
BER1YLR412W PAU22P0CE87 164 aa-0.54□□□□□ -2.5
BER1YLR412W PRS3P38689 320 aaKnown RBP-0.54□□□□□ -2.5
BER1YLR412W ICS3P47034 131 aa-0.54□□□□□ -2.5
BER1YLR412W YDR366CP87287 132 aa-0.54□□□□□ -2.5
BER1YLR412W YMR320WQ04897 101 aa-0.54□□□□□ -2.5
BER1YLR412W YBR072C-AQ3E794 53 aa-0.54□□□□□ -2.5
BER1YLR412W RPL36BO14455 100 aaKnown RBP-0.55□□□□□ -2.5
BER1YLR412W RPL36AP05745 100 aaPredicted RBP-0.55□□□□□ -2.5
BER1YLR412W YRF1-6P53819 1859 aa-0.56□□□□□ -2.5
BER1YLR412W YAL064WP39711 94 aa-0.56□□□□□ -2.5
BER1YLR412W RPL22AP05749 121 aaKnown RBP-0.57□□□□□ -2.5
BER1YLR412W YCR050CP25630 102 aa-0.57□□□□□ -2.5
BER1YLR412W YAP3P38749 330 aa-0.57□□□□□ -2.5
BER1YLR412W YGL041C-BQ3E750 60 aa-0.57□□□□□ -2.5
BER1YLR412W CCW14O13547 238 aa-0.58□□□□□ -2.5
BER1YLR412W PET54P10834 293 aa-0.58□□□□□ -2.5
BER1YLR412W SPC3Q12133 184 aa-0.59□□□□□ -2.5
BER1YLR412W HPM1P40481 377 aa-0.6□□□□□ -2.51
BER1YLR412W MRPS12P53732 153 aa-0.6□□□□□ -2.51
BER1YLR412W YLR285C-AQ3E771 56 aa-0.6□□□□□ -2.51
Retrieved 100 of 5,963 RNA–protein pairs in 64.7 ms