RNA–Protein interactions for RNA: YLR196W

PWP1, Transcript of Protein with WD-40 repeats involved in rRNA processing, yeastyeast

Gene PWP1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PWP1YLR196W PRO1P32264 428 aa4.36□□□□□ -1.71
PWP1YLR196W NHP2P32495 156 aaPredicted RBP4.36□□□□□ -1.71
PWP1YLR196W NRG2P38082 220 aa4.36□□□□□ -1.71
PWP1YLR196W YNL195CP40168 261 aa4.36□□□□□ -1.71
PWP1YLR196W YIL029CP40538 142 aa4.36□□□□□ -1.71
PWP1YLR196W SDS23P53172 527 aa4.36□□□□□ -1.71
PWP1YLR196W YLR281CQ05863 155 aa4.36□□□□□ -1.71
PWP1YLR196W STP3Q05937 343 aa4.36□□□□□ -1.71
PWP1YLR196W YOR385WQ08909 290 aa4.36□□□□□ -1.71
PWP1YLR196W DIF1O13577 133 aa4.35□□□□□ -1.71
PWP1YLR196W PAU2P32612 120 aa4.35□□□□□ -1.71
PWP1YLR196W ECM15P35195 104 aa4.35□□□□□ -1.71
PWP1YLR196W SFT2P38166 215 aa4.35□□□□□ -1.71
PWP1YLR196W GPI18P38211 433 aa4.35□□□□□ -1.71
PWP1YLR196W YKL023C-AQ2V2P3 75 aa4.35□□□□□ -1.71
PWP1YLR196W YMR175W-AQ3E766 64 aa4.35□□□□□ -1.71
PWP1YLR196W AQY1P0CD91 305 aa4.35□□□□□ -1.71
PWP1YLR196W UBC4P15731 148 aa4.35□□□□□ -1.71
PWP1YLR196W GPX1P36014 167 aa4.35□□□□□ -1.71
PWP1YLR196W ECM34P38728 170 aa4.35□□□□□ -1.71
PWP1YLR196W MED6P38782 295 aa4.35□□□□□ -1.71
PWP1YLR196W FIP1P45976 327 aa4.35□□□□□ -1.71
PWP1YLR196W RRT7Q07829 113 aa4.35□□□□□ -1.71
PWP1YLR196W IRC25Q07951 179 aa4.35□□□□□ -1.71
PWP1YLR196W DAD1Q12248 94 aa4.35□□□□□ -1.71
PWP1YLR196W SCS22Q6Q595 175 aa4.35□□□□□ -1.71
PWP1YLR196W VPS13Q07878 3144 aa4.34□□□□□ -1.71
PWP1YLR196W CSH1P38287 376 aa4.34□□□□□ -1.71
PWP1YLR196W RIM9Q04734 239 aa4.34□□□□□ -1.71
PWP1YLR196W TIM18Q08749 192 aa4.34□□□□□ -1.71
PWP1YLR196W YOR015WQ12169 119 aa4.34□□□□□ -1.71
PWP1YLR196W YDL180WQ12301 547 aa4.34□□□□□ -1.71
PWP1YLR196W SME1Q12330 94 aaPredicted RBP4.34□□□□□ -1.71
PWP1YLR196W MRS4P23500 304 aa4.33□□□□□ -1.72
PWP1YLR196W MXR2P25566 168 aa4.33□□□□□ -1.72
PWP1YLR196W OM14P38325 134 aa4.33□□□□□ -1.72
PWP1YLR196W BXI1P48558 297 aa4.33□□□□□ -1.72
PWP1YLR196W YNL046WP53956 172 aa4.33□□□□□ -1.72
PWP1YLR196W COX12Q01519 83 aa4.33□□□□□ -1.72
PWP1YLR196W ODC2Q99297 307 aa4.33□□□□□ -1.72
PWP1YLR196W ARC40P38328 384 aaKnown RBP4.32□□□□□ -1.72
PWP1YLR196W SNF11P38956 169 aa4.32□□□□□ -1.72
PWP1YLR196W POP3P53833 195 aaPredicted RBP4.32□□□□□ -1.72
PWP1YLR196W YOR292CQ08743 309 aa4.32□□□□□ -1.72
PWP1YLR196W YLR146W-AQ2V2P1 62 aa4.32□□□□□ -1.72
PWP1YLR196W COX9P07255 59 aa4.31□□□□□ -1.72
PWP1YLR196W SPO13P23624 291 aa4.31□□□□□ -1.72
PWP1YLR196W RNQ1P25367 405 aa4.31□□□□□ -1.72
PWP1YLR196W FLO5P38894 1075 aa4.31□□□□□ -1.72
PWP1YLR196W PEX17P40155 199 aa4.31□□□□□ -1.72
PWP1YLR196W SMD1Q02260 146 aaPredicted RBP4.31□□□□□ -1.72
PWP1YLR196W RPL21AQ02753 160 aaKnown RBP4.31□□□□□ -1.72
PWP1YLR196W PET191Q02772 108 aa4.31□□□□□ -1.72
PWP1YLR196W HPA2Q06592 156 aa4.31□□□□□ -1.72
PWP1YLR196W YDL211CQ12121 372 aa4.31□□□□□ -1.72
PWP1YLR196W RPL21BQ12672 160 aaKnown RBP4.31□□□□□ -1.72
PWP1YLR196W YBR255C-AQ3E776 120 aa4.31□□□□□ -1.72
PWP1YLR196W YPL038W-AQ3E7B4 63 aa4.31□□□□□ -1.72
PWP1YLR196W FUN19P28003 413 aaPredicted RBP4.3□□□□□ -1.72
PWP1YLR196W YHL042WP38729 150 aa4.3□□□□□ -1.72
PWP1YLR196W YAR068WP39564 161 aa4.3□□□□□ -1.72
PWP1YLR196W TOS8P53147 276 aa4.3□□□□□ -1.72
PWP1YLR196W YDR042CQ03205 200 aa4.3□□□□□ -1.72
PWP1YLR196W YLR111WQ12528 110 aa4.3□□□□□ -1.72
PWP1YLR196W TDA4P47153 279 aa4.29□□□□□ -1.72
PWP1YLR196W YNR064CP53750 290 aa4.29□□□□□ -1.72
PWP1YLR196W YNL234WP53857 426 aa4.29□□□□□ -1.72
PWP1YLR196W YOL160WQ08321 113 aa4.29□□□□□ -1.72
PWP1YLR196W MTC7P32633 139 aa4.29□□□□□ -1.72
PWP1YLR196W YIL169CP40442 995 aa4.29□□□□□ -1.72
PWP1YLR196W YIA6P40556 373 aa4.29□□□□□ -1.72
PWP1YLR196W PIR5P46999 287 aa4.29□□□□□ -1.72
PWP1YLR196W MST27P53176 234 aa4.29□□□□□ -1.72
PWP1YLR196W CUZ1P53899 274 aa4.29□□□□□ -1.72
PWP1YLR196W FSH2Q05015 223 aa4.29□□□□□ -1.72
PWP1YLR196W SYM1Q06563 197 aa4.29□□□□□ -1.72
PWP1YLR196W PAU1P0CE88 120 aa4.28□□□□□ -1.72
PWP1YLR196W PAU14P0CE89 120 aa4.28□□□□□ -1.72
PWP1YLR196W PAU6P0CE90 120 aa4.28□□□□□ -1.72
PWP1YLR196W PAU18P0CE91 120 aa4.28□□□□□ -1.72
PWP1YLR196W PAU8P0CE92 120 aa4.28□□□□□ -1.72
PWP1YLR196W PAU11P0CE93 120 aa4.28□□□□□ -1.72
PWP1YLR196W PAU13P38725 120 aa4.28□□□□□ -1.72
PWP1YLR196W PAU4P53427 120 aa4.28□□□□□ -1.72
PWP1YLR196W RSM19P53733 91 aaPredicted RBP4.28□□□□□ -1.72
PWP1YLR196W PAU10Q03050 120 aa4.28□□□□□ -1.72
PWP1YLR196W PAU20Q08322 120 aa4.28□□□□□ -1.72
PWP1YLR196W YDL009CQ12210 107 aa4.28□□□□□ -1.72
PWP1YLR196W RNH203Q12338 110 aa4.28□□□□□ -1.72
PWP1YLR196W PAU9Q3E770 120 aa4.28□□□□□ -1.72
PWP1YLR196W TSC3Q3E790 80 aa4.28□□□□□ -1.72
PWP1YLR196W MIC10Q96VH5 97 aa4.28□□□□□ -1.72
PWP1YLR196W CYR1P08678 2026 aaKnown RBP4.28□□□□□ -1.72
PWP1YLR196W MDH2P22133 377 aa4.27□□□□□ -1.73
PWP1YLR196W YCR006CP25350 157 aa4.27□□□□□ -1.73
PWP1YLR196W AHT1P29589 182 aa4.27□□□□□ -1.73
PWP1YLR196W TIM12P32830 109 aa4.27□□□□□ -1.73
PWP1YLR196W SPT4P32914 102 aaPredicted RBP4.27□□□□□ -1.73
PWP1YLR196W YRA2P36036 203 aaKnown RBP RIP-Chip data4.27□□□□□ -1.73not detected
PWP1YLR196W MRPL27P36526 146 aaPredicted RBP4.27□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 110.2 ms