RNA–Protein interactions for RNA: YLL040C

VPS13, Transcript of Protein involved in prospore membrane morphogenesis, yeastyeast

Gene VPS13, Length 9,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS13YLL040C FSF1Q12029 327 aaKnown RBP1.91□□□□□ -2.1
VPS13YLL040C RPB10P22139 70 aa1.91□□□□□ -2.1
VPS13YLL040C RRT1P38192 103 aa1.91□□□□□ -2.1
VPS13YLL040C POR2P40478 281 aa1.91□□□□□ -2.1
VPS13YLL040C DSK2P48510 373 aa1.91□□□□□ -2.1
VPS13YLL040C YNL092WP53934 400 aa1.91□□□□□ -2.1
VPS13YLL040C WTM2Q12206 467 aa1.91□□□□□ -2.1
VPS13YLL040C ATO3Q12359 275 aa1.91□□□□□ -2.1
VPS13YLL040C COA3Q3E7B2 85 aa1.91□□□□□ -2.1
VPS13YLL040C NUD1P32336 851 aa1.91□□□□□ -2.1
VPS13YLL040C YKR070WP36151 352 aaKnown RBP1.91□□□□□ -2.1
VPS13YLL040C PAI3P01094 68 aa1.91□□□□□ -2.1
VPS13YLL040C APS1P35181 156 aa1.91□□□□□ -2.1
VPS13YLL040C LTP1P40347 161 aa1.91□□□□□ -2.1
VPS13YLL040C SGN1P40561 250 aaKnown RBP RIP-Chip data1.91□□□□□ -2.1not detected
VPS13YLL040C YOR097CQ12274 175 aaPredicted RBP1.91□□□□□ -2.1
VPS13YLL040C TRP1P00912 224 aa1.91□□□□□ -2.1
VPS13YLL040C YJL213WP40896 331 aa1.91□□□□□ -2.1
VPS13YLL040C NRM1P53718 249 aa1.91□□□□□ -2.1
VPS13YLL040C PKR1Q03880 122 aaKnown RBP1.91□□□□□ -2.1
VPS13YLL040C YLR194CQ05777 254 aa1.91□□□□□ -2.1
VPS13YLL040C RNH203Q12338 110 aa1.91□□□□□ -2.1
VPS13YLL040C RPL15AP05748 204 aaKnown RBP1.9□□□□□ -2.1
VPS13YLL040C LST8P41318 303 aa1.9□□□□□ -2.1
VPS13YLL040C SWT21P53873 357 aaPredicted RBP1.9□□□□□ -2.1
VPS13YLL040C RPL15BP54780 204 aaPredicted RBP1.9□□□□□ -2.1
VPS13YLL040C POC4Q12245 148 aaPredicted RBP1.9□□□□□ -2.1
VPS13YLL040C ADH1P00330 348 aaKnown RBP1.9□□□□□ -2.1
VPS13YLL040C NCA3P46955 337 aa1.9□□□□□ -2.1
VPS13YLL040C FCY1Q12178 158 aa1.9□□□□□ -2.1
VPS13YLL040C YGL010WP25338 174 aa1.9□□□□□ -2.1
VPS13YLL040C DIA1P54005 336 aa1.9□□□□□ -2.1
VPS13YLL040C RPL14AP36105 138 aaKnown RBP1.9□□□□□ -2.11
VPS13YLL040C RPL14BP38754 138 aaKnown RBP1.9□□□□□ -2.11
VPS13YLL040C SNF11P38956 169 aa1.9□□□□□ -2.11
VPS13YLL040C CAB4P53332 305 aa1.9□□□□□ -2.11
VPS13YLL040C POP3P53833 195 aaPredicted RBP1.9□□□□□ -2.11
VPS13YLL040C YDR102CQ03864 110 aa1.9□□□□□ -2.11
VPS13YLL040C RAF1Q06891 181 aa1.9□□□□□ -2.11
VPS13YLL040C YPL257WQ08974 193 aa1.9□□□□□ -2.11
VPS13YLL040C YNL146C-AQ3E7Z1 64 aa1.9□□□□□ -2.11
VPS13YLL040C ADH5P38113 351 aaKnown RBP1.9□□□□□ -2.11
VPS13YLL040C RPF1P38805 295 aaKnown RBP1.9□□□□□ -2.11
VPS13YLL040C ELA1P53861 379 aaPredicted RBP1.9□□□□□ -2.11
VPS13YLL040C YIL014C-AQ02598 104 aa1.9□□□□□ -2.11
VPS13YLL040C YOL118CQ08259 102 aa1.9□□□□□ -2.11
VPS13YLL040C ECM14P38836 430 aa1.9□□□□□ -2.11
VPS13YLL040C MIC26P50087 233 aa1.9□□□□□ -2.11
VPS13YLL040C SLO1Q3E784 85 aa1.9□□□□□ -2.11
VPS13YLL040C PET8P38921 284 aa1.9□□□□□ -2.11
VPS13YLL040C MRPL49P40858 161 aaPredicted RBP1.9□□□□□ -2.11
VPS13YLL040C SAL1D6W196 494 aa1.89□□□□□ -2.11
VPS13YLL040C QCR8P08525 94 aa1.89□□□□□ -2.11
VPS13YLL040C RPS8AP0CX39 200 aaKnown RBP1.89□□□□□ -2.11
VPS13YLL040C RPS8BP0CX40 200 aaKnown RBP1.89□□□□□ -2.11
VPS13YLL040C TIR2P33890 251 aa1.89□□□□□ -2.11
VPS13YLL040C PCL7P40186 285 aa1.89□□□□□ -2.11
VPS13YLL040C SBH2P52871 88 aa1.89□□□□□ -2.11
VPS13YLL040C AIM34Q03673 198 aa1.89□□□□□ -2.11
VPS13YLL040C YOR020W-AQ3E824 90 aa1.89□□□□□ -2.11
VPS13YLL040C YHR140WP38842 239 aa1.89□□□□□ -2.11
VPS13YLL040C MOT3P54785 490 aaKnown RBP1.89□□□□□ -2.11
VPS13YLL040C SPO24Q3E752 67 aa1.89□□□□□ -2.11
VPS13YLL040C YBR126W-AQ8TGU7 68 aa1.89□□□□□ -2.11
VPS13YLL040C IGO2Q9P305 131 aa1.89□□□□□ -2.11
VPS13YLL040C MSA2P36157 363 aa1.89□□□□□ -2.11
VPS13YLL040C YLL053CP0CD98 152 aa1.89□□□□□ -2.11
VPS13YLL040C SEN15Q04675 128 aa1.89□□□□□ -2.11
VPS13YLL040C YPR014CQ6B0W2 109 aa1.89□□□□□ -2.11
VPS13YLL040C YDR034W-BQ6Q5X2 51 aa1.89□□□□□ -2.11
VPS13YLL040C HMRA2P0CY13 119 aa1.89□□□□□ -2.11
VPS13YLL040C DAD2P36162 133 aa1.89□□□□□ -2.11
VPS13YLL040C MOH1P38191 138 aa1.89□□□□□ -2.11
VPS13YLL040C YER181CP40097 107 aa1.89□□□□□ -2.11
VPS13YLL040C GAT4P40569 121 aa1.89□□□□□ -2.11
VPS13YLL040C YDL186WP48568 277 aa1.89□□□□□ -2.11
VPS13YLL040C UGX2P32772 223 aa1.89□□□□□ -2.11
VPS13YLL040C RDS3Q06835 107 aaPredicted RBP1.89□□□□□ -2.11
VPS13YLL040C DAD1Q12248 94 aa1.89□□□□□ -2.11
VPS13YLL040C RAD6P06104 172 aa1.88□□□□□ -2.11
VPS13YLL040C YDL241WQ07738 123 aa1.88□□□□□ -2.11
VPS13YLL040C Q0255P03881 472 aa1.88□□□□□ -2.11
VPS13YLL040C SCS22Q6Q595 175 aa1.88□□□□□ -2.11
VPS13YLL040C YNL198CP40166 100 aa1.88□□□□□ -2.11
VPS13YLL040C YMR317WQ04893 1140 aa1.88□□□□□ -2.11
VPS13YLL040C TAO3P40468 2376 aa1.88□□□□□ -2.11
VPS13YLL040C NAT5Q08689 176 aa1.88□□□□□ -2.11
VPS13YLL040C INO2P26798 304 aa1.88□□□□□ -2.11
VPS13YLL040C MTC6P38849 526 aa1.88□□□□□ -2.11
VPS13YLL040C YMR105W-AQ8TGS8 64 aa1.88□□□□□ -2.11
VPS13YLL040C YKR045CP36138 183 aa1.88□□□□□ -2.11
VPS13YLL040C YNL200CP40165 246 aaKnown RBP1.88□□□□□ -2.11
VPS13YLL040C MST27P53176 234 aa1.88□□□□□ -2.11
VPS13YLL040C RAV2Q03956 351 aa1.88□□□□□ -2.11
VPS13YLL040C YOR192C-CQ3E736 78 aa1.88□□□□□ -2.11
VPS13YLL040C YNL208WP40159 199 aaKnown RBP1.88□□□□□ -2.11
VPS13YLL040C YFL041W-AQ3E817 63 aa1.88□□□□□ -2.11
VPS13YLL040C RPL23AP0CX41 137 aaKnown RBP1.87□□□□□ -2.11
VPS13YLL040C RPL23BP0CX42 137 aaKnown RBP1.87□□□□□ -2.11
VPS13YLL040C YMR103CQ04436 120 aa1.87□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 57.1 ms