RNA–Protein interactions for RNA: YJL047C

RTT101, Transcript of Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex, yeastyeast

Gene RTT101, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT101YJL047C RPA190P10964 1664 aaKnown RBP1.4□□□□□ -2.19
RTT101YJL047C CLB6P32943 380 aa1.4□□□□□ -2.19
RTT101YJL047C YHL018WP38744 120 aaPredicted RBP1.4□□□□□ -2.19
RTT101YJL047C TIR3P40552 269 aa1.4□□□□□ -2.19
RTT101YJL047C GEA2P39993 1459 aaKnown RBP1.4□□□□□ -2.19
RTT101YJL047C TY3B-IQ7LHG5 1498 aaKnown RBP1.4□□□□□ -2.19
RTT101YJL047C GEA1P47102 1408 aaPredicted RBP1.4□□□□□ -2.19
RTT101YJL047C YHR130CP38834 111 aa1.39□□□□□ -2.19
RTT101YJL047C SNU13P39990 126 aaKnown RBP1.39□□□□□ -2.19
RTT101YJL047C RAD28Q12021 506 aa1.39□□□□□ -2.19
RTT101YJL047C YSP2Q06681 1438 aa1.39□□□□□ -2.19
RTT101YJL047C TY1B-DR1Q03855 1755 aa1.39□□□□□ -2.19
RTT101YJL047C TY1B-DR3Q99231 1755 aa1.39□□□□□ -2.19
RTT101YJL047C RPL40AP0CH08 128 aaKnown RBP1.39□□□□□ -2.19
RTT101YJL047C RPL40BP0CH09 128 aaKnown RBP1.39□□□□□ -2.19
RTT101YJL047C KRE1P17260 313 aa1.39□□□□□ -2.19
RTT101YJL047C TDA2P40045 126 aa1.39□□□□□ -2.19
RTT101YJL047C CIS3P47001 227 aa1.39□□□□□ -2.19
RTT101YJL047C ERV14P53173 138 aa1.39□□□□□ -2.19
RTT101YJL047C GPI19Q04082 140 aa1.39□□□□□ -2.19
RTT101YJL047C FIT2Q08906 153 aa1.39□□□□□ -2.19
RTT101YJL047C KSH1Q8TGJ3 72 aa1.39□□□□□ -2.19
RTT101YJL047C MIC10Q96VH5 97 aa1.39□□□□□ -2.19
RTT101YJL047C TY1B-NL2Q99337 1749 aaKnown RBP1.38□□□□□ -2.19
RTT101YJL047C COX8P04039 78 aa1.38□□□□□ -2.19
RTT101YJL047C RPL26AP05743 127 aaKnown RBP1.38□□□□□ -2.19
RTT101YJL047C UTR5P32630 166 aa1.38□□□□□ -2.19
RTT101YJL047C YGR269WP40326 108 aa1.38□□□□□ -2.19
RTT101YJL047C YIL059CP40520 121 aa1.38□□□□□ -2.19
RTT101YJL047C RPL26BP53221 127 aaKnown RBP1.38□□□□□ -2.19
RTT101YJL047C YML079WQ03629 201 aa1.38□□□□□ -2.19
RTT101YJL047C CAT8P39113 1433 aa1.38□□□□□ -2.19
RTT101YJL047C SEC11P15367 167 aa1.38□□□□□ -2.19
RTT101YJL047C UBC4P15731 148 aa1.38□□□□□ -2.19
RTT101YJL047C AGA2P32781 87 aa1.38□□□□□ -2.19
RTT101YJL047C ATP19P81451 68 aa1.38□□□□□ -2.19
RTT101YJL047C CUE4Q04201 117 aaPredicted RBP1.38□□□□□ -2.19
RTT101YJL047C YMR090WQ04304 227 aaKnown RBP1.38□□□□□ -2.19
RTT101YJL047C ELP6Q04868 273 aa1.38□□□□□ -2.19
RTT101YJL047C NMA1Q06178 401 aaKnown RBP1.38□□□□□ -2.19
RTT101YJL047C RDS3Q06835 107 aaPredicted RBP1.38□□□□□ -2.19
RTT101YJL047C RAF1Q06891 181 aa1.38□□□□□ -2.19
RTT101YJL047C CMC4Q3E7A9 73 aa1.38□□□□□ -2.19
RTT101YJL047C YLR365WQ7LIF2 110 aa1.38□□□□□ -2.19
RTT101YJL047C LTE1P07866 1435 aa1.38□□□□□ -2.19
RTT101YJL047C MRPS9P38120 278 aa1.37□□□□□ -2.19
RTT101YJL047C MPC1P53157 130 aaKnown RBP1.37□□□□□ -2.19
RTT101YJL047C PAU12P53343 120 aa1.37□□□□□ -2.19
RTT101YJL047C FIT1Q04433 528 aa1.37□□□□□ -2.19
RTT101YJL047C YDR114CQ04597 100 aa1.37□□□□□ -2.19
RTT101YJL047C YRF1-2P40105 1681 aa1.37□□□□□ -2.19
RTT101YJL047C LAA1P39526 2014 aa1.37□□□□□ -2.19
RTT101YJL047C FPR1P20081 114 aaKnown RBP1.37□□□□□ -2.19
RTT101YJL047C STF2P16965 84 aa1.36□□□□□ -2.19
RTT101YJL047C YBR209WP38311 105 aa1.36□□□□□ -2.19
RTT101YJL047C POP3P53833 195 aaPredicted RBP1.36□□□□□ -2.19
RTT101YJL047C DAD4P69851 72 aa1.36□□□□□ -2.19
RTT101YJL047C SEN15Q04675 128 aa1.36□□□□□ -2.19
RTT101YJL047C AVO2Q04749 426 aa1.36□□□□□ -2.19
RTT101YJL047C YPR153WQ06537 140 aa1.36□□□□□ -2.19
RTT101YJL047C PAU21P0CE86 164 aa1.36□□□□□ -2.19
RTT101YJL047C PAU22P0CE87 164 aa1.36□□□□□ -2.19
RTT101YJL047C HMRA1P0CY11 126 aa1.36□□□□□ -2.19
RTT101YJL047C PAU2P32612 120 aa1.36□□□□□ -2.19
RTT101YJL047C ECM31P38122 312 aa1.36□□□□□ -2.19
RTT101YJL047C HPA3P39979 161 aa1.36□□□□□ -2.19
RTT101YJL047C YER187WP40102 141 aa1.36□□□□□ -2.19
RTT101YJL047C GTT1P40582 234 aa1.36□□□□□ -2.19
RTT101YJL047C DCV1P43595 202 aa1.36□□□□□ -2.19
RTT101YJL047C BRP1P53194 125 aa1.36□□□□□ -2.19
RTT101YJL047C GRX5Q02784 150 aa1.36□□□□□ -2.19
RTT101YJL047C FIT3Q08907 204 aa1.36□□□□□ -2.19
RTT101YJL047C VPS68Q12016 184 aa1.36□□□□□ -2.19
RTT101YJL047C YDL157CQ12082 118 aa1.36□□□□□ -2.19
RTT101YJL047C RRT15Q3E811 62 aa1.36□□□□□ -2.19
RTT101YJL047C MDM35O60200 86 aa1.35□□□□□ -2.19
RTT101YJL047C MRPL44P19956 98 aa1.35□□□□□ -2.19
RTT101YJL047C YGL010WP25338 174 aa1.35□□□□□ -2.19
RTT101YJL047C PEP8P40335 379 aa1.35□□□□□ -2.19
RTT101YJL047C YFL051CP43552 160 aa1.35□□□□□ -2.19
RTT101YJL047C IGO1P53897 168 aa1.35□□□□□ -2.19
RTT101YJL047C YMR082CQ04276 118 aa1.35□□□□□ -2.19
RTT101YJL047C HRT1Q08273 121 aa1.35□□□□□ -2.19
RTT101YJL047C YDR029WQ12111 104 aa1.35□□□□□ -2.19
RTT101YJL047C MET5P47169 1442 aa1.35□□□□□ -2.19
RTT101YJL047C RTC6O14464 93 aa1.35□□□□□ -2.19
RTT101YJL047C FUN14P18411 198 aa1.35□□□□□ -2.19
RTT101YJL047C HSP150P32478 413 aa1.35□□□□□ -2.19
RTT101YJL047C IPT1P38954 527 aa1.35□□□□□ -2.19
RTT101YJL047C YGL149WP53116 101 aa1.35□□□□□ -2.19
RTT101YJL047C YKR045CP36138 183 aa1.34□□□□□ -2.19
RTT101YJL047C YJL144WP47009 104 aa1.34□□□□□ -2.19
RTT101YJL047C SWC7Q06707 132 aa1.34□□□□□ -2.19
RTT101YJL047C YPL261CQ08976 102 aa1.34□□□□□ -2.19
RTT101YJL047C YOS1Q3E834 85 aa1.34□□□□□ -2.19
RTT101YJL047C CDC39P25655 2108 aaKnown RBP1.34□□□□□ -2.19
RTT101YJL047C RPS25BP0C0T4 108 aaKnown RBP1.34□□□□□ -2.2
RTT101YJL047C PAU24P38155 120 aa1.34□□□□□ -2.2
RTT101YJL047C YHR022CP38763 256 aa1.34□□□□□ -2.2
RTT101YJL047C SVP26P38869 228 aa1.34□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms