RNA–Protein interactions for RNA: YHR172W

SPC97, Transcript of Component of the microtubule-nucleating Tub4p (gamma-tubulin) complex, yeastyeast

Gene SPC97, Length 2,472 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC97YHR172W PPT2Q12036 173 aa3.98□□□□□ -1.77
SPC97YHR172W TY1B-DR1Q03855 1755 aa3.97□□□□□ -1.77
SPC97YHR172W TY1B-DR3Q99231 1755 aa3.97□□□□□ -1.77
SPC97YHR172W FYV5P25585 152 aa3.97□□□□□ -1.77
SPC97YHR172W MID2P36027 376 aa3.97□□□□□ -1.77
SPC97YHR172W MRPL27P36526 146 aaPredicted RBP3.97□□□□□ -1.77
SPC97YHR172W ELP6Q04868 273 aa3.97□□□□□ -1.77
SPC97YHR172W MIG1P27705 504 aa3.96□□□□□ -1.78
SPC97YHR172W LSM2P38203 95 aaKnown RBP3.96□□□□□ -1.78
SPC97YHR172W UPS3Q04006 179 aa3.96□□□□□ -1.78
SPC97YHR172W MIX14Q04341 121 aa3.96□□□□□ -1.78
SPC97YHR172W YOR015WQ12169 119 aa3.96□□□□□ -1.78
SPC97YHR172W CYB5P40312 120 aa3.96□□□□□ -1.78
SPC97YHR172W HUR1P45820 110 aa3.96□□□□□ -1.78
SPC97YHR172W IRC19Q07843 230 aa3.96□□□□□ -1.78
SPC97YHR172W YEL045CP32616 141 aa3.95□□□□□ -1.78
SPC97YHR172W DAN1P47178 298 aa3.95□□□□□ -1.78
SPC97YHR172W PIR1Q03178 341 aa3.95□□□□□ -1.78
SPC97YHR172W YDL241WQ07738 123 aa3.95□□□□□ -1.78
SPC97YHR172W PEP8P40335 379 aa3.95□□□□□ -1.78
SPC97YHR172W VMA21P41806 77 aa3.95□□□□□ -1.78
SPC97YHR172W YML079WQ03629 201 aa3.95□□□□□ -1.78
SPC97YHR172W SML1Q04964 104 aa3.95□□□□□ -1.78
SPC97YHR172W TY1B-NL2Q99337 1749 aaKnown RBP3.94□□□□□ -1.78
SPC97YHR172W YKR032WP36127 104 aa3.94□□□□□ -1.78
SPC97YHR172W YLR296WQ05898 108 aa3.94□□□□□ -1.78
SPC97YHR172W YOR268CQ08734 132 aa3.94□□□□□ -1.78
SPC97YHR172W YHR213W-AQ8TGT4 77 aa3.94□□□□□ -1.78
SPC97YHR172W TY1B-DR4Q07793 1604 aa3.93□□□□□ -1.78
SPC97YHR172W CWP2P43497 92 aa3.93□□□□□ -1.78
SPC97YHR172W ATG41Q12048 136 aa3.93□□□□□ -1.78
SPC97YHR172W AUS1Q08409 1394 aa3.93□□□□□ -1.78
SPC97YHR172W YHR180WP38868 163 aa3.93□□□□□ -1.78
SPC97YHR172W UBR1P19812 1950 aa3.92□□□□□ -1.78
SPC97YHR172W YHL018WP38744 120 aaPredicted RBP3.92□□□□□ -1.78
SPC97YHR172W YER187WP40102 141 aa3.92□□□□□ -1.78
SPC97YHR172W YNR077CP53758 84 aa3.92□□□□□ -1.78
SPC97YHR172W BNI1P41832 1953 aa3.92□□□□□ -1.78
SPC97YHR172W RSM19P53733 91 aaPredicted RBP3.92□□□□□ -1.78
SPC97YHR172W IGO1P53897 168 aa3.92□□□□□ -1.78
SPC97YHR172W NMA1Q06178 401 aaKnown RBP3.92□□□□□ -1.78
SPC97YHR172W PAU21P0CE86 164 aa3.91□□□□□ -1.78
SPC97YHR172W PAU22P0CE87 164 aa3.91□□□□□ -1.78
SPC97YHR172W NRG2P38082 220 aa3.91□□□□□ -1.78
SPC97YHR172W HSP10P38910 106 aa3.91□□□□□ -1.78
SPC97YHR172W YEL067CP39978 195 aa3.91□□□□□ -1.78
SPC97YHR172W YFL065CP43539 102 aa3.91□□□□□ -1.78
SPC97YHR172W YPR203WQ08994 102 aa3.91□□□□□ -1.78
SPC97YHR172W DAD1Q12248 94 aa3.91□□□□□ -1.78
SPC97YHR172W SUS1Q6WNK7 96 aa3.9□□□□□ -1.78
SPC97YHR172W YBR298C-AQ8TGK4 73 aa3.9□□□□□ -1.78
SPC97YHR172W ROM2P51862 1356 aaKnown RBP3.9□□□□□ -1.78
SPC97YHR172W NUP159P40477 1460 aa3.9□□□□□ -1.78
SPC97YHR172W SCC2Q04002 1493 aa3.9□□□□□ -1.78
SPC97YHR172W YGR269WP40326 108 aa3.9□□□□□ -1.79
SPC97YHR172W YRF1-2P40105 1681 aa3.9□□□□□ -1.79
SPC97YHR172W YBR013CP38215 129 aa3.89□□□□□ -1.79
SPC97YHR172W YHR138CP38841 114 aaPredicted RBP3.89□□□□□ -1.79
SPC97YHR172W MRPS16Q02608 121 aa3.89□□□□□ -1.79
SPC97YHR172W YPL261CQ08976 102 aa3.89□□□□□ -1.79
SPC97YHR172W GLT1Q12680 2145 aaKnown RBP3.89□□□□□ -1.79
SPC97YHR172W MDM35O60200 86 aa3.89□□□□□ -1.79
SPC97YHR172W YPR013CQ12145 317 aa3.89□□□□□ -1.79
SPC97YHR172W RRT15Q3E811 62 aa3.89□□□□□ -1.79
SPC97YHR172W RPS23AP0CX29 145 aaKnown RBP3.88□□□□□ -1.79
SPC97YHR172W RPS23BP0CX30 145 aa3.88□□□□□ -1.79
SPC97YHR172W YKR045CP36138 183 aa3.88□□□□□ -1.79
SPC97YHR172W RPL33BP41056 107 aaKnown RBP3.88□□□□□ -1.79
SPC97YHR172W YDR042CQ03205 200 aa3.88□□□□□ -1.79
SPC97YHR172W YLR363W-AQ3E747 85 aa3.88□□□□□ -1.79
SPC97YHR172W YPK9Q12697 1472 aa3.88□□□□□ -1.79
SPC97YHR172W MSB2P32334 1306 aa3.88□□□□□ -1.79
SPC97YHR172W PAI3P01094 68 aa3.87□□□□□ -1.79
SPC97YHR172W HSP26P15992 214 aaKnown RBP RIP-Chip data3.87□□□□□ -1.79not detected
SPC97YHR172W YCR085WP25650 117 aa3.87□□□□□ -1.79
SPC97YHR172W SVP26P38869 228 aa3.87□□□□□ -1.79
SPC97YHR172W TMC1Q08422 150 aaPredicted RBP3.87□□□□□ -1.79
SPC97YHR172W NAT5Q08689 176 aa3.87□□□□□ -1.79
SPC97YHR172W YLR236CA0A023PZG4 107 aa3.87□□□□□ -1.79
SPC97YHR172W RPS25BP0C0T4 108 aaKnown RBP3.87□□□□□ -1.79
SPC97YHR172W YFR010W-AP0C5N0 62 aa3.87□□□□□ -1.79
SPC97YHR172W SMC4Q12267 1418 aa3.87□□□□□ -1.79
SPC97YHR172W FUN14P18411 198 aa3.86□□□□□ -1.79
SPC97YHR172W EMC6Q12431 108 aa3.86□□□□□ -1.79
SPC97YHR172W SWR1Q05471 1514 aa3.86□□□□□ -1.79
SPC97YHR172W RPS19AP07280 144 aaKnown RBP3.86□□□□□ -1.79
SPC97YHR172W RPS19BP07281 144 aaPredicted RBP3.86□□□□□ -1.79
SPC97YHR172W STF2P16965 84 aa3.86□□□□□ -1.79
SPC97YHR172W YGL149WP53116 101 aa3.86□□□□□ -1.79
SPC97YHR172W DCV1P43595 202 aa3.85□□□□□ -1.79
SPC97YHR172W PAU12P53343 120 aa3.85□□□□□ -1.79
SPC97YHR172W YPR153WQ06537 140 aa3.85□□□□□ -1.79
SPC97YHR172W YNL162W-AQ3E7A8 72 aa3.85□□□□□ -1.79
SPC97YHR172W RPL40AP0CH08 128 aaKnown RBP3.85□□□□□ -1.79
SPC97YHR172W RPL40BP0CH09 128 aaKnown RBP3.85□□□□□ -1.79
SPC97YHR172W BOL2P53082 120 aa3.85□□□□□ -1.79
SPC97YHR172W OST5Q92316 86 aa3.85□□□□□ -1.79
SPC97YHR172W RPA190P10964 1664 aaKnown RBP3.85□□□□□ -1.79
SPC97YHR172W BRP1P53194 125 aa3.84□□□□□ -1.79
SPC97YHR172W CUE4Q04201 117 aaPredicted RBP3.84□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 99.2 ms