RNA–Protein interactions for RNA: YHR154W

RTT107, Transcript of Protein implicated in Mms22-dependent DNA repair during S phase, yeastyeast

Gene RTT107, Length 3,213 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT107YHR154W YMR320WQ04897 101 aa1.5□□□□□ -2.17
RTT107YHR154W PIN3Q06449 215 aa1.5□□□□□ -2.17
RTT107YHR154W FYV12Q08559 129 aa1.5□□□□□ -2.17
RTT107YHR154W YAR023CD6VPM8 179 aa1.5□□□□□ -2.17
RTT107YHR154W YHR214C-DP0CX93 97 aa1.5□□□□□ -2.17
RTT107YHR154W RPA12P32529 125 aaKnown RBP1.5□□□□□ -2.17
RTT107YHR154W NSE4P43124 402 aa1.5□□□□□ -2.17
RTT107YHR154W RPS12P48589 143 aaKnown RBP1.5□□□□□ -2.17
RTT107YHR154W SPG1P50088 95 aa1.5□□□□□ -2.17
RTT107YHR154W ERV14P53173 138 aa1.5□□□□□ -2.17
RTT107YHR154W FIT1Q04433 528 aa1.5□□□□□ -2.17
RTT107YHR154W UPS1Q05776 175 aa1.5□□□□□ -2.17
RTT107YHR154W CNL1Q06333 122 aa1.5□□□□□ -2.17
RTT107YHR154W MCP1Q12106 302 aa1.5□□□□□ -2.17
RTT107YHR154W YDL180WQ12301 547 aa1.5□□□□□ -2.17
RTT107YHR154W SMT3Q12306 101 aaKnown RBP1.5□□□□□ -2.17
RTT107YHR154W RAD6P06104 172 aa1.49□□□□□ -2.17
RTT107YHR154W NOP1P15646 327 aaKnown RBP1.49□□□□□ -2.17
RTT107YHR154W ECM31P38122 312 aa1.49□□□□□ -2.17
RTT107YHR154W HTD2P38790 280 aaKnown RBP1.49□□□□□ -2.17
RTT107YHR154W HYR1P40581 163 aaKnown RBP1.49□□□□□ -2.17
RTT107YHR154W XPT1P47165 209 aa1.49□□□□□ -2.17
RTT107YHR154W APJ1P53940 528 aa1.49□□□□□ -2.17
RTT107YHR154W YKR005CQ02203 525 aa1.49□□□□□ -2.17
RTT107YHR154W VPS71Q03433 280 aa1.49□□□□□ -2.17
RTT107YHR154W MIX14Q04341 121 aa1.49□□□□□ -2.17
RTT107YHR154W SML1Q04964 104 aa1.49□□□□□ -2.17
RTT107YHR154W ATP14Q12349 124 aa1.49□□□□□ -2.17
RTT107YHR154W SPT14P32363 452 aa1.49□□□□□ -2.17
RTT107YHR154W YIR020CP40575 100 aa1.49□□□□□ -2.17
RTT107YHR154W REE1P40893 198 aa1.49□□□□□ -2.17
RTT107YHR154W ACT1P60010 375 aaKnown RBP1.49□□□□□ -2.17
RTT107YHR154W GRX5Q02784 150 aa1.49□□□□□ -2.17
RTT107YHR154W YMR295CQ03559 197 aa1.49□□□□□ -2.17
RTT107YHR154W WIP1Q2V2P8 89 aa1.49□□□□□ -2.17
RTT107YHR154W PRE1P22141 198 aaKnown RBP1.49□□□□□ -2.17
RTT107YHR154W YCR099CP25657 155 aa1.49□□□□□ -2.17
RTT107YHR154W YET1P35723 206 aa1.49□□□□□ -2.17
RTT107YHR154W YHR140WP38842 239 aa1.49□□□□□ -2.17
RTT107YHR154W YNL200CP40165 246 aaKnown RBP1.49□□□□□ -2.17
RTT107YHR154W YFL019CP43576 117 aa1.49□□□□□ -2.17
RTT107YHR154W RPA43P46669 326 aa1.49□□□□□ -2.17
RTT107YHR154W SLM2P53955 656 aa1.49□□□□□ -2.17
RTT107YHR154W GAL83Q04739 417 aa1.49□□□□□ -2.17
RTT107YHR154W YBR298C-AQ8TGK4 73 aa1.49□□□□□ -2.17
RTT107YHR154W FMP49A0A023PZB3 126 aa1.48□□□□□ -2.17
RTT107YHR154W RPL9AP05738 191 aaKnown RBP1.48□□□□□ -2.17
RTT107YHR154W MRPL11P36521 249 aaPredicted RBP1.48□□□□□ -2.17
RTT107YHR154W SFT2P38166 215 aa1.48□□□□□ -2.17
RTT107YHR154W YER134CP40081 178 aa1.48□□□□□ -2.17
RTT107YHR154W YJL218WP40892 196 aaKnown RBP1.48□□□□□ -2.17
RTT107YHR154W RPL9BP51401 191 aaKnown RBP1.48□□□□□ -2.17
RTT107YHR154W YGR026WP53217 278 aa1.48□□□□□ -2.17
RTT107YHR154W YNR062CP53748 327 aa1.48□□□□□ -2.17
RTT107YHR154W BUD25P85052 153 aa1.48□□□□□ -2.17
RTT107YHR154W EST3Q03096 181 aa1.48□□□□□ -2.17
RTT107YHR154W MRPS8Q03799 155 aa1.48□□□□□ -2.17
RTT107YHR154W TSA2Q04120 196 aa1.48□□□□□ -2.17
RTT107YHR154W RAF1Q06891 181 aa1.48□□□□□ -2.17
RTT107YHR154W YGR035W-AQ45U48 73 aa1.48□□□□□ -2.17
RTT107YHR154W SGA1P08019 549 aa1.48□□□□□ -2.17
RTT107YHR154W ATP15P21306 62 aa1.48□□□□□ -2.17
RTT107YHR154W PCL1P24867 279 aa1.48□□□□□ -2.17
RTT107YHR154W YFL051CP43552 160 aa1.48□□□□□ -2.17
RTT107YHR154W RSM19P53733 91 aaPredicted RBP1.48□□□□□ -2.17
RTT107YHR154W TMA23Q03525 211 aa1.48□□□□□ -2.17
RTT107YHR154W RIM9Q04734 239 aa1.48□□□□□ -2.17
RTT107YHR154W YLR118CQ12354 227 aa1.48□□□□□ -2.17
RTT107YHR154W YCL001W-BQ96VH2 84 aa1.48□□□□□ -2.17
RTT107YHR154W MRP49P32388 137 aa1.47□□□□□ -2.17
RTT107YHR154W HYM1P32464 399 aa1.47□□□□□ -2.17
RTT107YHR154W PGD1P40356 397 aa1.47□□□□□ -2.17
RTT107YHR154W SKI6P46948 246 aaPredicted RBP1.47□□□□□ -2.17
RTT107YHR154W SAY1P53324 424 aa1.47□□□□□ -2.17
RTT107YHR154W YCL001W-AP87012 153 aa1.47□□□□□ -2.17
RTT107YHR154W ADH1P00330 348 aaKnown RBP1.47□□□□□ -2.17
RTT107YHR154W MSW1P04803 379 aa1.47□□□□□ -2.17
RTT107YHR154W PHO85P17157 305 aa1.47□□□□□ -2.17
RTT107YHR154W KRE1P17260 313 aa1.47□□□□□ -2.17
RTT107YHR154W MRPL27P36526 146 aaPredicted RBP1.47□□□□□ -2.17
RTT107YHR154W YFL012WP43580 148 aa1.47□□□□□ -2.17
RTT107YHR154W SFT1P43682 97 aa1.47□□□□□ -2.17
RTT107YHR154W ATG40Q99325 256 aa1.47□□□□□ -2.17
RTT107YHR154W POR1P04840 283 aaKnown RBP1.47□□□□□ -2.17
RTT107YHR154W AHT1P29589 182 aa1.47□□□□□ -2.17
RTT107YHR154W HAL1Q01766 294 aa1.47□□□□□ -2.17
RTT107YHR154W FSF1Q12029 327 aaKnown RBP1.47□□□□□ -2.17
RTT107YHR154W PAM17P36147 197 aa1.46□□□□□ -2.18
RTT107YHR154W YHL005CP38752 130 aa1.46□□□□□ -2.18
RTT107YHR154W VTC1P40046 129 aaRIP-Chip data1.46□□□□□ -2.18not detected
RTT107YHR154W GAT4P40569 121 aa1.46□□□□□ -2.18
RTT107YHR154W GNA1P43577 159 aaPredicted RBP1.46□□□□□ -2.18
RTT107YHR154W YDR114CQ04597 100 aa1.46□□□□□ -2.18
RTT107YHR154W YOR304C-AO14468 76 aa1.46□□□□□ -2.18
RTT107YHR154W COX5BP00425 151 aa1.46□□□□□ -2.18
RTT107YHR154W IPT1P38954 527 aa1.46□□□□□ -2.18
RTT107YHR154W YER181CP40097 107 aa1.46□□□□□ -2.18
RTT107YHR154W BOL2P53082 120 aa1.46□□□□□ -2.18
RTT107YHR154W SMD1Q02260 146 aaPredicted RBP1.46□□□□□ -2.18
RTT107YHR154W RRT7Q07829 113 aa1.46□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms