RNA–Protein interactions for RNA: YHR120W

MSH1, Transcript of DNA-binding protein of the mitochondria, yeastyeast

Gene MSH1, Length 2,880 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH1YHR120W YFL068WP0CX99 160 aa4.01□□□□□ -1.77
MSH1YHR120W YLL066W-AP0CY00 160 aa4.01□□□□□ -1.77
MSH1YHR120W YLL067W-AP0CY01 160 aa4.01□□□□□ -1.77
MSH1YHR120W CUP2P15315 225 aa4.01□□□□□ -1.77
MSH1YHR120W YBL071CP38185 102 aa4.01□□□□□ -1.77
MSH1YHR120W RAV2Q03956 351 aa4.01□□□□□ -1.77
MSH1YHR120W MIG1P27705 504 aa4.01□□□□□ -1.77
MSH1YHR120W YPT10P38146 199 aa4.01□□□□□ -1.77
MSH1YHR120W CWC27Q02770 301 aa4.01□□□□□ -1.77
MSH1YHR120W JID1Q12350 301 aa4.01□□□□□ -1.77
MSH1YHR120W YGR035W-AQ45U48 73 aa4.01□□□□□ -1.77
MSH1YHR120W SEC11P15367 167 aa4□□□□□ -1.77
MSH1YHR120W HAC1P41546 238 aa4□□□□□ -1.77
MSH1YHR120W WWM1P43582 211 aaKnown RBP4□□□□□ -1.77
MSH1YHR120W YGR017WP53210 297 aa4□□□□□ -1.77
MSH1YHR120W YLR050CQ12155 161 aaKnown RBP4□□□□□ -1.77
MSH1YHR120W FEN2P25621 512 aaKnown RBP4□□□□□ -1.77
MSH1YHR120W SFT2P38166 215 aa4□□□□□ -1.77
MSH1YHR120W AGE2P40529 298 aa4□□□□□ -1.77
MSH1YHR120W PKR1Q03880 122 aaKnown RBP4□□□□□ -1.77
MSH1YHR120W HTB1P02293 131 aaKnown RBP4□□□□□ -1.77
MSH1YHR120W YPR170W-BP0C5R9 85 aa4□□□□□ -1.77
MSH1YHR120W DDI2P0CH63 225 aa4□□□□□ -1.77
MSH1YHR120W DDI3P0CH64 225 aa4□□□□□ -1.77
MSH1YHR120W MRPL31P14063 131 aaPredicted RBP4□□□□□ -1.77
MSH1YHR120W ZRT1P32804 376 aa4□□□□□ -1.77
MSH1YHR120W DOG2P38773 246 aa4□□□□□ -1.77
MSH1YHR120W TDA4P47153 279 aa4□□□□□ -1.77
MSH1YHR120W HST4P53688 370 aa4□□□□□ -1.77
MSH1YHR120W SDH7Q04401 133 aa4□□□□□ -1.77
MSH1YHR120W SPG4Q04438 115 aa4□□□□□ -1.77
MSH1YHR120W INO2P26798 304 aa3.99□□□□□ -1.77
MSH1YHR120W MRP49P32388 137 aa3.99□□□□□ -1.77
MSH1YHR120W LST8P41318 303 aa3.99□□□□□ -1.77
MSH1YHR120W FSF1Q12029 327 aaKnown RBP3.99□□□□□ -1.77
MSH1YHR120W HTB2P02294 131 aa3.99□□□□□ -1.77
MSH1YHR120W PAU7P39545 55 aa3.99□□□□□ -1.77
MSH1YHR120W FIP1P45976 327 aa3.99□□□□□ -1.77
MSH1YHR120W UPS3Q04006 179 aa3.99□□□□□ -1.77
MSH1YHR120W CSM4Q08955 156 aa3.99□□□□□ -1.77
MSH1YHR120W YLR302CO13544 120 aa3.98□□□□□ -1.77
MSH1YHR120W DFR1P07807 211 aaKnown RBP RIP-Chip data3.98□□□□□ -1.77not detected
MSH1YHR120W MDM10P18409 493 aa3.98□□□□□ -1.77
MSH1YHR120W YKR045CP36138 183 aa3.98□□□□□ -1.77
MSH1YHR120W ARC18Q05933 178 aaKnown RBP3.98□□□□□ -1.77
MSH1YHR120W RKI1Q12189 258 aa3.98□□□□□ -1.77
MSH1YHR120W AYT1Q12226 474 aa3.98□□□□□ -1.77
MSH1YHR120W FZF1P32805 299 aa3.98□□□□□ -1.77
MSH1YHR120W MSL1P40567 111 aaPredicted RBP3.98□□□□□ -1.77
MSH1YHR120W YJL213WP40896 331 aa3.98□□□□□ -1.77
MSH1YHR120W TOM7P53507 60 aa3.98□□□□□ -1.77
MSH1YHR120W GRH1Q04410 372 aaKnown RBP3.98□□□□□ -1.77
MSH1YHR120W UTP23Q12339 254 aaKnown RBP3.98□□□□□ -1.77
MSH1YHR120W YPS1P32329 569 aa3.97□□□□□ -1.77
MSH1YHR120W YJL163CP46996 555 aa3.97□□□□□ -1.77
MSH1YHR120W RPL12AP0CX53 165 aaKnown RBP3.97□□□□□ -1.77
MSH1YHR120W RPL12BP0CX54 165 aa3.97□□□□□ -1.77
MSH1YHR120W MRPL20P22354 195 aaPredicted RBP3.97□□□□□ -1.77
MSH1YHR120W LSM2P38203 95 aaKnown RBP3.97□□□□□ -1.77
MSH1YHR120W SEC72P39742 193 aaKnown RBP3.97□□□□□ -1.77
MSH1YHR120W GPP2P40106 250 aaKnown RBP3.97□□□□□ -1.77
MSH1YHR120W YNL200CP40165 246 aaKnown RBP3.97□□□□□ -1.77
MSH1YHR120W YFR045WP43617 309 aa3.97□□□□□ -1.77
MSH1YHR120W BET5Q03630 159 aa3.97□□□□□ -1.77
MSH1YHR120W DPP1Q05521 289 aa3.97□□□□□ -1.77
MSH1YHR120W YDR215CQ12240 137 aa3.97□□□□□ -1.77
MSH1YHR120W YHR213WP0CI67 198 aa3.96□□□□□ -1.77
MSH1YHR120W RPL23AP0CX41 137 aaKnown RBP3.96□□□□□ -1.77
MSH1YHR120W RPL23BP0CX42 137 aaKnown RBP3.96□□□□□ -1.77
MSH1YHR120W VPS55P47111 140 aa3.96□□□□□ -1.77
MSH1YHR120W SDS23P53172 527 aa3.96□□□□□ -1.77
MSH1YHR120W THG1P53215 237 aaKnown RBP3.96□□□□□ -1.77
MSH1YHR120W SWT21P53873 357 aaPredicted RBP3.96□□□□□ -1.77
MSH1YHR120W YML122CQ03207 126 aa3.96□□□□□ -1.77
MSH1YHR120W MBF1O14467 151 aaKnown RBP3.96□□□□□ -1.78
MSH1YHR120W CPT1P17898 393 aa3.96□□□□□ -1.78
MSH1YHR120W YPI1P43587 155 aa3.96□□□□□ -1.78
MSH1YHR120W IMP2P46972 177 aa3.96□□□□□ -1.78
MSH1YHR120W YDR366CP87287 132 aa3.96□□□□□ -1.78
MSH1YHR120W HOR7Q05827 59 aa3.96□□□□□ -1.78
MSH1YHR120W PRE1P22141 198 aaKnown RBP3.96□□□□□ -1.78
MSH1YHR120W VPS71Q03433 280 aa3.96□□□□□ -1.78
MSH1YHR120W TIM18Q08749 192 aa3.96□□□□□ -1.78
MSH1YHR120W MRPL23Q12487 163 aaPredicted RBP3.96□□□□□ -1.78
MSH1YHR120W YLR342W-AQ3E810 57 aa3.96□□□□□ -1.78
MSH1YHR120W POP3P53833 195 aaPredicted RBP3.95□□□□□ -1.78
MSH1YHR120W HTL1Q9URQ5 78 aa3.95□□□□□ -1.78
MSH1YHR120W YDR042CQ03205 200 aa3.95□□□□□ -1.78
MSH1YHR120W YKL044WP36092 106 aa3.94□□□□□ -1.78
MSH1YHR120W RRT1P38192 103 aa3.94□□□□□ -1.78
MSH1YHR120W YLR363W-AQ3E747 85 aa3.94□□□□□ -1.78
MSH1YHR120W TMA7Q3E764 64 aaKnown RBP3.94□□□□□ -1.78
MSH1YHR120W ELF1P36053 145 aa3.94□□□□□ -1.78
MSH1YHR120W YKR070WP36151 352 aaKnown RBP3.94□□□□□ -1.78
MSH1YHR120W YJL027CP47063 138 aaPredicted RBP3.94□□□□□ -1.78
MSH1YHR120W GTO3Q04806 366 aa3.94□□□□□ -1.78
MSH1YHR120W PBP4Q07362 185 aaKnown RBP3.94□□□□□ -1.78
MSH1YHR120W RXT3Q07458 294 aa3.94□□□□□ -1.78
MSH1YHR120W YCR023CP25351 611 aa3.93□□□□□ -1.78
MSH1YHR120W GLE2P40066 365 aa3.93□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 79.4 ms