RNA–Protein interactions for RNA: YGR104C

SRB5, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene SRB5, Length 924 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRB5YGR104C JID1Q12350 301 aa3.35□□□□□ -1.87
SRB5YGR104C YAL063C-AQ3E791 96 aa3.35□□□□□ -1.87
SRB5YGR104C MHF1Q3E835 90 aa3.35□□□□□ -1.87
SRB5YGR104C YLR422WQ06409 1932 aa3.34□□□□□ -1.87
SRB5YGR104C UTP10P42945 1769 aaKnown RBP3.34□□□□□ -1.87
SRB5YGR104C ADH3P07246 375 aaKnown RBP3.34□□□□□ -1.87
SRB5YGR104C MAK31P23059 88 aa3.34□□□□□ -1.87
SRB5YGR104C NRG2P38082 220 aa3.34□□□□□ -1.87
SRB5YGR104C SWD3P38123 315 aa3.34□□□□□ -1.87
SRB5YGR104C YHL018WP38744 120 aaPredicted RBP3.34□□□□□ -1.87
SRB5YGR104C SMD3P43321 101 aaKnown RBP3.34□□□□□ -1.87
SRB5YGR104C PIR3Q03180 325 aa3.34□□□□□ -1.87
SRB5YGR104C STU1P38198 1513 aa3.34□□□□□ -1.88
SRB5YGR104C BPT1P14772 1559 aa3.34□□□□□ -1.88
SRB5YGR104C YAR023CD6VPM8 179 aa3.33□□□□□ -1.88
SRB5YGR104C YCR022CP25620 114 aa3.33□□□□□ -1.88
SRB5YGR104C MID2P36027 376 aa3.33□□□□□ -1.88
SRB5YGR104C SNF11P38956 169 aa3.33□□□□□ -1.88
SRB5YGR104C FLX1P40464 311 aa3.33□□□□□ -1.88
SRB5YGR104C YNR064CP53750 290 aa3.33□□□□□ -1.88
SRB5YGR104C HAL1Q01766 294 aa3.33□□□□□ -1.88
SRB5YGR104C PCC1Q3E833 88 aa3.33□□□□□ -1.88
SRB5YGR104C YIL134C-AQ45U18 67 aa3.33□□□□□ -1.88
SRB5YGR104C YLR365WQ7LIF2 110 aa3.33□□□□□ -1.88
SRB5YGR104C SNQ2P32568 1501 aaKnown RBP3.33□□□□□ -1.88
SRB5YGR104C IRC20Q06554 1556 aa3.33□□□□□ -1.88
SRB5YGR104C POR1P04840 283 aaKnown RBP3.32□□□□□ -1.88
SRB5YGR104C RPS25BP0C0T4 108 aaKnown RBP3.32□□□□□ -1.88
SRB5YGR104C YOL162WP0CF19 215 aa3.32□□□□□ -1.88
SRB5YGR104C GPI18P38211 433 aa3.32□□□□□ -1.88
SRB5YGR104C YHL042WP38729 150 aa3.32□□□□□ -1.88
SRB5YGR104C SVP26P38869 228 aa3.32□□□□□ -1.88
SRB5YGR104C YAR068WP39564 161 aa3.32□□□□□ -1.88
SRB5YGR104C HYR1P40581 163 aaKnown RBP3.32□□□□□ -1.88
SRB5YGR104C KNH1P50112 268 aa3.32□□□□□ -1.88
SRB5YGR104C ELP6Q04868 273 aa3.32□□□□□ -1.88
SRB5YGR104C NMA1Q06178 401 aaKnown RBP3.32□□□□□ -1.88
SRB5YGR104C PAU23Q07987 124 aa3.32□□□□□ -1.88
SRB5YGR104C POC4Q12245 148 aaPredicted RBP3.32□□□□□ -1.88
SRB5YGR104C PAU17Q12370 124 aa3.32□□□□□ -1.88
SRB5YGR104C ATG40Q99325 256 aa3.32□□□□□ -1.88
SRB5YGR104C ESP1Q03018 1630 aa3.31□□□□□ -1.88
SRB5YGR104C POL1P13382 1468 aa3.31□□□□□ -1.88
SRB5YGR104C KRE1P17260 313 aa3.31□□□□□ -1.88
SRB5YGR104C RPA12P32529 125 aaKnown RBP3.31□□□□□ -1.88
SRB5YGR104C YKL044WP36092 106 aa3.31□□□□□ -1.88
SRB5YGR104C YHR138CP38841 114 aaPredicted RBP3.31□□□□□ -1.88
SRB5YGR104C MIX14Q04341 121 aa3.31□□□□□ -1.88
SRB5YGR104C PIN3Q06449 215 aa3.31□□□□□ -1.88
SRB5YGR104C DFM1Q12743 341 aaKnown RBP3.31□□□□□ -1.88
SRB5YGR104C YNR034W-AQ3E841 98 aa3.31□□□□□ -1.88
SRB5YGR104C ENV10Q99382 181 aa3.31□□□□□ -1.88
SRB5YGR104C COX4P04037 155 aa3.3□□□□□ -1.88
SRB5YGR104C HSP26P15992 214 aaKnown RBP RIP-Chip data3.3□□□□□ -1.88not detected
SRB5YGR104C UTR5P32630 166 aa3.3□□□□□ -1.88
SRB5YGR104C ATX1P38636 73 aa3.3□□□□□ -1.88
SRB5YGR104C KRE9P39005 276 aa3.3□□□□□ -1.88
SRB5YGR104C RSM19P53733 91 aaPredicted RBP3.3□□□□□ -1.88
SRB5YGR104C MRPS8Q03799 155 aa3.3□□□□□ -1.88
SRB5YGR104C YLR296WQ05898 108 aa3.3□□□□□ -1.88
SRB5YGR104C IRC25Q07951 179 aa3.3□□□□□ -1.88
SRB5YGR104C ATP20Q12233 115 aa3.3□□□□□ -1.88
SRB5YGR104C SCS22Q6Q595 175 aa3.3□□□□□ -1.88
SRB5YGR104C SUS1Q6WNK7 96 aa3.3□□□□□ -1.88
SRB5YGR104C ODC2Q99297 307 aa3.3□□□□□ -1.88
SRB5YGR104C RPO21P04050 1733 aaKnown RBP3.3□□□□□ -1.88
SRB5YGR104C PDR12Q02785 1511 aa3.29□□□□□ -1.88
SRB5YGR104C DUR1,2P32528 1835 aaKnown RBP3.29□□□□□ -1.88
SRB5YGR104C PEP8P40335 379 aa3.29□□□□□ -1.88
SRB5YGR104C ARC15P40518 154 aaRIP-Chip data3.29□□□□□ -1.88not detected
SRB5YGR104C YDR042CQ03205 200 aa3.29□□□□□ -1.88
SRB5YGR104C LIP1Q03579 150 aa3.29□□□□□ -1.88
SRB5YGR104C NAT5Q08689 176 aa3.29□□□□□ -1.88
SRB5YGR104C YOR385WQ08909 290 aa3.29□□□□□ -1.88
SRB5YGR104C EMC6Q12431 108 aa3.29□□□□□ -1.88
SRB5YGR104C RRT15Q3E811 62 aa3.29□□□□□ -1.88
SRB5YGR104C SPT6P23615 1451 aaKnown RBP3.28□□□□□ -1.88
SRB5YGR104C TIM9O74700 87 aa3.28□□□□□ -1.88
SRB5YGR104C YEL045CP32616 141 aa3.28□□□□□ -1.88
SRB5YGR104C UMP1P38293 148 aa3.28□□□□□ -1.88
SRB5YGR104C YEL073CP39974 107 aa3.28□□□□□ -1.88
SRB5YGR104C YNL217WP40152 326 aa3.28□□□□□ -1.88
SRB5YGR104C YNL208WP40159 199 aaKnown RBP3.28□□□□□ -1.88
SRB5YGR104C YPI1P43587 155 aa3.28□□□□□ -1.88
SRB5YGR104C HUR1P45820 110 aa3.28□□□□□ -1.88
SRB5YGR104C CYT2Q00873 224 aa3.28□□□□□ -1.88
SRB5YGR104C RIM9Q04734 239 aa3.28□□□□□ -1.88
SRB5YGR104C DAD1Q12248 94 aa3.28□□□□□ -1.88
SRB5YGR104C SMT3Q12306 101 aaKnown RBP3.28□□□□□ -1.88
SRB5YGR104C YLR363W-AQ3E747 85 aa3.28□□□□□ -1.88
SRB5YGR104C RPA190P10964 1664 aaKnown RBP3.27□□□□□ -1.89
SRB5YGR104C QCR10P37299 77 aa3.27□□□□□ -1.89
SRB5YGR104C ECM34P38728 170 aa3.27□□□□□ -1.89
SRB5YGR104C YDR274CP87283 123 aa3.27□□□□□ -1.89
SRB5YGR104C YPL247CQ12523 523 aa3.27□□□□□ -1.89
SRB5YGR104C YDR119W-AQ2V2P9 66 aa3.27□□□□□ -1.89
SRB5YGR104C YMR175W-AQ3E766 64 aa3.27□□□□□ -1.89
SRB5YGR104C UBR1P19812 1950 aa3.27□□□□□ -1.89
SRB5YGR104C YLR419WQ06698 1435 aaKnown RBP3.27□□□□□ -1.89
SRB5YGR104C DOP1Q03921 1698 aa3.27□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms