RNA–Protein interactions for RNA: YGR074W

SMD1, Transcript of Core Sm protein Sm D1, yeastyeast

Gene SMD1, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD1YGR074W HPM1P40481 377 aa0.89□□□□□ -2.27
SMD1YGR074W ELC1Q03071 99 aa0.89□□□□□ -2.27
SMD1YGR074W CNL1Q06333 122 aa0.89□□□□□ -2.27
SMD1YGR074W LCL2Q08045 131 aa0.89□□□□□ -2.27
SMD1YGR074W TY4B-JP47024 1803 aa0.89□□□□□ -2.27
SMD1YGR074W HAP2P06774 265 aa0.88□□□□□ -2.27
SMD1YGR074W PFY1P07274 126 aa0.88□□□□□ -2.27
SMD1YGR074W YGL014C-AP0C5N1 53 aa0.88□□□□□ -2.27
SMD1YGR074W UGX2P32772 223 aa0.88□□□□□ -2.27
SMD1YGR074W RPS1AP33442 255 aaKnown RBP0.88□□□□□ -2.27
SMD1YGR074W QCR10P37299 77 aa0.88□□□□□ -2.27
SMD1YGR074W ATG8P38182 117 aaRIP-Chip data0.88□□□□□ -2.27not detected
SMD1YGR074W PRS3P38689 320 aaKnown RBP0.88□□□□□ -2.27
SMD1YGR074W BRP1P53194 125 aa0.88□□□□□ -2.27
SMD1YGR074W SDH7Q04401 133 aa0.88□□□□□ -2.27
SMD1YGR074W YLR361C-AQ3E795 98 aa0.88□□□□□ -2.27
SMD1YGR074W HFA1P32874 2273 aa0.88□□□□□ -2.27
SMD1YGR074W YRF1-3P0CX14 1859 aa0.88□□□□□ -2.27
SMD1YGR074W YRF1-7P0CX15 1859 aa0.88□□□□□ -2.27
SMD1YGR074W RPS22AP0C0W1 130 aaKnown RBP0.87□□□□□ -2.27
SMD1YGR074W YHR213WP0CI67 198 aa0.87□□□□□ -2.27
SMD1YGR074W HAP3P13434 144 aa0.87□□□□□ -2.27
SMD1YGR074W FUN14P18411 198 aa0.87□□□□□ -2.27
SMD1YGR074W RPL14AP36105 138 aaKnown RBP0.87□□□□□ -2.27
SMD1YGR074W RPL14BP38754 138 aaKnown RBP0.87□□□□□ -2.27
SMD1YGR074W LST8P41318 303 aa0.87□□□□□ -2.27
SMD1YGR074W RPL37BP51402 88 aaKnown RBP0.87□□□□□ -2.27
SMD1YGR074W DYN2Q02647 92 aa0.87□□□□□ -2.27
SMD1YGR074W YPL067CQ02754 198 aa0.87□□□□□ -2.27
SMD1YGR074W RPS22BQ3E7Y3 130 aaKnown RBP0.87□□□□□ -2.27
SMD1YGR074W PAU21P0CE86 164 aa0.86□□□□□ -2.27
SMD1YGR074W PAU22P0CE87 164 aa0.86□□□□□ -2.27
SMD1YGR074W NMT1P14743 455 aa0.86□□□□□ -2.27
SMD1YGR074W YCR050CP25630 102 aa0.86□□□□□ -2.27
SMD1YGR074W MRPL11P36521 249 aaPredicted RBP0.86□□□□□ -2.27
SMD1YGR074W HSP10P38910 106 aa0.86□□□□□ -2.27
SMD1YGR074W PHS1P40857 217 aa0.86□□□□□ -2.27
SMD1YGR074W MGR2Q02889 113 aa0.86□□□□□ -2.27
SMD1YGR074W YMR122CQ03879 124 aa0.86□□□□□ -2.27
SMD1YGR074W SEN15Q04675 128 aa0.86□□□□□ -2.27
SMD1YGR074W NKP2Q06162 153 aa0.86□□□□□ -2.27
SMD1YGR074W KTI11Q3E840 82 aa0.86□□□□□ -2.27
SMD1YGR074W MYO2P19524 1574 aaKnown RBP0.86□□□□□ -2.27
SMD1YGR074W YOL013W-AP0C272 63 aaPredicted RBP0.85□□□□□ -2.27
SMD1YGR074W ACP1P32463 125 aa0.85□□□□□ -2.27
SMD1YGR074W SLO1Q3E784 85 aa0.85□□□□□ -2.27
SMD1YGR074W COA6Q3E846 104 aa0.85□□□□□ -2.27
SMD1YGR074W YHR213W-BQ8TGK1 99 aa0.85□□□□□ -2.27
SMD1YGR074W ROM2P51862 1356 aaKnown RBP0.84□□□□□ -2.27
SMD1YGR074W SFT1P43682 97 aa0.84□□□□□ -2.27
SMD1YGR074W YGL149WP53116 101 aa0.84□□□□□ -2.27
SMD1YGR074W AIM36Q03798 255 aa0.84□□□□□ -2.27
SMD1YGR074W TVP18Q04767 167 aa0.84□□□□□ -2.27
SMD1YGR074W YLR296WQ05898 108 aa0.84□□□□□ -2.27
SMD1YGR074W LAA1P39526 2014 aa0.83□□□□□ -2.28
SMD1YGR074W GSP1P32835 219 aaKnown RBP0.83□□□□□ -2.28
SMD1YGR074W YAL064WP39711 94 aa0.83□□□□□ -2.28
SMD1YGR074W TIM8P57744 87 aa0.83□□□□□ -2.28
SMD1YGR074W COA4Q05809 96 aa0.83□□□□□ -2.28
SMD1YGR074W RAD50P12753 1312 aa0.83□□□□□ -2.28
SMD1YGR074W RPL36BO14455 100 aaKnown RBP0.82□□□□□ -2.28
SMD1YGR074W RPL36AP05745 100 aaPredicted RBP0.82□□□□□ -2.28
SMD1YGR074W HYM1P32464 399 aa0.82□□□□□ -2.28
SMD1YGR074W VMA7P39111 118 aa0.82□□□□□ -2.28
SMD1YGR074W GAT4P40569 121 aa0.82□□□□□ -2.28
SMD1YGR074W AIM11P87275 137 aa0.82□□□□□ -2.28
SMD1YGR074W LDB18Q07887 179 aa0.82□□□□□ -2.28
SMD1YGR074W RPL40AP0CH08 128 aaKnown RBP0.81□□□□□ -2.28
SMD1YGR074W RPL40BP0CH09 128 aaKnown RBP0.81□□□□□ -2.28
SMD1YGR074W UTP11P34247 250 aaPredicted RBP0.81□□□□□ -2.28
SMD1YGR074W ERV14P53173 138 aa0.81□□□□□ -2.28
SMD1YGR074W SAE3P89114 91 aa0.81□□□□□ -2.28
SMD1YGR074W PRM3Q08931 133 aa0.81□□□□□ -2.28
SMD1YGR074W MED11Q99278 115 aa0.81□□□□□ -2.28
SMD1YGR074W TRM732Q03496 1420 aa0.81□□□□□ -2.28
SMD1YGR074W RTC6O14464 93 aa0.8□□□□□ -2.28
SMD1YGR074W YER188C-AP0C0V2 99 aa0.8□□□□□ -2.28
SMD1YGR074W MRP49P32388 137 aa0.8□□□□□ -2.28
SMD1YGR074W HHY1P39982 102 aa0.8□□□□□ -2.28
SMD1YGR074W FIT3Q08907 204 aa0.8□□□□□ -2.28
SMD1YGR074W GTT2Q12390 233 aa0.8□□□□□ -2.28
SMD1YGR074W YSF3P0C074 85 aaPredicted RBP0.79□□□□□ -2.28
SMD1YGR074W SEC59P20048 519 aa0.79□□□□□ -2.28
SMD1YGR074W AIM18P38884 321 aa0.79□□□□□ -2.28
SMD1YGR074W SNT2P53127 1403 aa0.79□□□□□ -2.28
SMD1YGR074W YJL197C-AP0C5P0 93 aa0.78□□□□□ -2.28
SMD1YGR074W YLR118CQ12354 227 aa0.78□□□□□ -2.28
SMD1YGR074W TY1B-HO13535 1793 aa0.78□□□□□ -2.29
SMD1YGR074W YKL044WP36092 106 aa0.77□□□□□ -2.29
SMD1YGR074W TRS20P38334 175 aa0.77□□□□□ -2.29
SMD1YGR074W YMR141CP40211 102 aa0.77□□□□□ -2.29
SMD1YGR074W APS2Q00381 147 aa0.77□□□□□ -2.29
SMD1YGR074W GPI19Q04082 140 aa0.77□□□□□ -2.29
SMD1YGR074W FRQ1Q06389 190 aa0.77□□□□□ -2.29
SMD1YGR074W HPA2Q06592 156 aa0.77□□□□□ -2.29
SMD1YGR074W FCF2Q12035 217 aaPredicted RBP0.77□□□□□ -2.29
SMD1YGR074W YRF1-6P53819 1859 aa0.76□□□□□ -2.29
SMD1YGR074W YBR013CP38215 129 aa0.76□□□□□ -2.29
SMD1YGR074W MVB12P42939 101 aa0.76□□□□□ -2.29
SMD1YGR074W ICS3P47034 131 aa0.76□□□□□ -2.29
Retrieved 100 of 5,963 RNA–protein pairs in 120.5 ms