RNA–Protein interactions for RNA: YGR040W

KSS1, Transcript of Mitogen-activated protein kinase (MAPK), yeast

Gene KSS1, Length 1,107 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
KSS1	YGR040W	LSM2	P38203	95 aa	Known RBP	4.63	□□□□□ -1.67
KSS1	YGR040W	RPB11	P38902	120 aa		4.63	□□□□□ -1.67
KSS1	YGR040W	YIR020C	P40575	100 aa		4.63	□□□□□ -1.67
KSS1	YGR040W	ERV14	P53173	138 aa		4.63	□□□□□ -1.67
KSS1	YGR040W	HST4	P53688	370 aa		4.63	□□□□□ -1.67
KSS1	YGR040W	SEN15	Q04675	128 aa		4.63	□□□□□ -1.67
KSS1	YGR040W	CSI2	Q08054	341 aa		4.63	□□□□□ -1.67
KSS1	YGR040W	TMC1	Q08422	150 aa	Predicted RBP	4.63	□□□□□ -1.67
KSS1	YGR040W	AYT1	Q12226	474 aa		4.63	□□□□□ -1.67
KSS1	YGR040W	YKL183C-A	Q3E765	70 aa		4.63	□□□□□ -1.67
KSS1	YGR040W	YBR121C-A	P0C5L4	52 aa		4.62	□□□□□ -1.67
KSS1	YGR040W	RPL18A	P0CX49	186 aa	Known RBP	4.62	□□□□□ -1.67
KSS1	YGR040W	RPL18B	P0CX50	186 aa	Known RBP	4.62	□□□□□ -1.67
KSS1	YGR040W	TIR1	P10863	254 aa		4.62	□□□□□ -1.67
KSS1	YGR040W	TIR2	P33890	251 aa		4.62	□□□□□ -1.67
KSS1	YGR040W	MRPL38	P35996	138 aa	Predicted RBP	4.62	□□□□□ -1.67
KSS1	YGR040W	YBR090C	P38253	122 aa		4.62	□□□□□ -1.67
KSS1	YGR040W	OST3	P48439	350 aa		4.62	□□□□□ -1.67
KSS1	YGR040W	TOM7	P53507	60 aa		4.62	□□□□□ -1.67
KSS1	YGR040W	RAV2	Q03956	351 aa		4.62	□□□□□ -1.67
KSS1	YGR040W	ATX2	Q12067	313 aa		4.62	□□□□□ -1.67
KSS1	YGR040W	BPH1	P25356	2167 aa		4.62	□□□□□ -1.67
KSS1	YGR040W	YER145C-A	A0A023PYF4	145 aa		4.61	□□□□□ -1.67
KSS1	YGR040W	YHR213W	P0CI67	198 aa		4.61	□□□□□ -1.67
KSS1	YGR040W	YER190C-B	P0CX94	160 aa		4.61	□□□□□ -1.67
KSS1	YGR040W	YEL077W-A	P0CX95	160 aa		4.61	□□□□□ -1.67
KSS1	YGR040W	YGR296C-B	P0CX96	160 aa		4.61	□□□□□ -1.67
KSS1	YGR040W	YPL283W-B	P0CX97	160 aa		4.61	□□□□□ -1.67
KSS1	YGR040W	YPR204C-A	P0CX98	160 aa		4.61	□□□□□ -1.67
KSS1	YGR040W	CUP2	P15315	225 aa		4.61	□□□□□ -1.67
KSS1	YGR040W	PAM17	P36147	197 aa		4.61	□□□□□ -1.67
KSS1	YGR040W	MRPL11	P36521	249 aa	Predicted RBP	4.61	□□□□□ -1.67
KSS1	YGR040W	MIX23	P38162	196 aa		4.61	□□□□□ -1.67
KSS1	YGR040W	HUA1	P40325	198 aa		4.61	□□□□□ -1.67
KSS1	YGR040W	YIL012W	P40551	113 aa		4.61	□□□□□ -1.67
KSS1	YGR040W	TPT1	Q12272	230 aa	Known RBP	4.61	□□□□□ -1.67
KSS1	YGR040W	RPS22B	Q3E7Y3	130 aa	Known RBP	4.61	□□□□□ -1.67
KSS1	YGR040W	YIL134C-A	Q45U18	67 aa		4.61	□□□□□ -1.67
KSS1	YGR040W	DUG3	P53871	357 aa		4.6	□□□□□ -1.67
KSS1	YGR040W	SWT21	P53873	357 aa	Predicted RBP	4.6	□□□□□ -1.67
KSS1	YGR040W	FUN14	P18411	198 aa		4.59	□□□□□ -1.67
KSS1	YGR040W	MRPL44	P19956	98 aa		4.59	□□□□□ -1.67
KSS1	YGR040W	VMA11	P32842	164 aa		4.59	□□□□□ -1.67
KSS1	YGR040W	YMR166C	Q03829	368 aa		4.59	□□□□□ -1.67
KSS1	YGR040W	IRC23	Q08416	157 aa		4.59	□□□□□ -1.67
KSS1	YGR040W	YCR024C-B	Q3E7Z8	88 aa		4.59	□□□□□ -1.67
KSS1	YGR040W	MRPL20	P22354	195 aa	Predicted RBP	4.58	□□□□□ -1.68
KSS1	YGR040W	FZF1	P32805	299 aa		4.58	□□□□□ -1.68
KSS1	YGR040W	MBB1	P39534	108 aa		4.58	□□□□□ -1.68
KSS1	YGR040W	YFR045W	P43617	309 aa		4.58	□□□□□ -1.68
KSS1	YGR040W	IMP2	P46972	177 aa		4.58	□□□□□ -1.68
KSS1	YGR040W	TDA4	P47153	279 aa		4.58	□□□□□ -1.68
KSS1	YGR040W	YDL186W	P48568	277 aa		4.58	□□□□□ -1.68
KSS1	YGR040W	RPL15B	P54780	204 aa	Predicted RBP	4.58	□□□□□ -1.68
KSS1	YGR040W	DAD4	P69851	72 aa		4.58	□□□□□ -1.68
KSS1	YGR040W	UBC7	Q02159	165 aa		4.58	□□□□□ -1.68
KSS1	YGR040W	PBP4	Q07362	185 aa	Known RBP	4.58	□□□□□ -1.68
KSS1	YGR040W	DAD1	Q12248	94 aa		4.58	□□□□□ -1.68
KSS1	YGR040W	CYC3	P06182	269 aa		4.57	□□□□□ -1.68
KSS1	YGR040W	MRPL31	P14063	131 aa	Predicted RBP	4.57	□□□□□ -1.68
KSS1	YGR040W	SCM4	P32564	187 aa		4.57	□□□□□ -1.68
KSS1	YGR040W	RPA43	P46669	326 aa		4.57	□□□□□ -1.68
KSS1	YGR040W	YMR317W	Q04893	1140 aa		4.57	□□□□□ -1.68
KSS1	YGR040W	TIM18	Q08749	192 aa		4.57	□□□□□ -1.68
KSS1	YGR040W	POM33	Q12164	279 aa		4.57	□□□□□ -1.68
KSS1	YGR040W	RPS28B	P0C0X0	67 aa	Known RBP	4.56	□□□□□ -1.68
KSS1	YGR040W	ZRT1	P32804	376 aa		4.56	□□□□□ -1.68
KSS1	YGR040W	PAU7	P39545	55 aa		4.56	□□□□□ -1.68
KSS1	YGR040W	SNU13	P39990	126 aa	Known RBP	4.56	□□□□□ -1.68
KSS1	YGR040W	GLE2	P40066	365 aa		4.56	□□□□□ -1.68
KSS1	YGR040W	YFR057W	P43625	151 aa		4.56	□□□□□ -1.68
KSS1	YGR040W	YJL027C	P47063	138 aa	Predicted RBP	4.56	□□□□□ -1.68
KSS1	YGR040W	SDS23	P53172	527 aa		4.56	□□□□□ -1.68
KSS1	YGR040W	YGR219W	P53307	113 aa		4.56	□□□□□ -1.68
KSS1	YGR040W	FYV7	Q12247	151 aa		4.56	□□□□□ -1.68
KSS1	YGR040W	RPS28A	Q3E7X9	67 aa	Predicted RBP	4.56	□□□□□ -1.68
KSS1	YGR040W	URA2	P07259	2214 aa	Known RBP	4.56	□□□□□ -1.68
KSS1	YGR040W	SEC4	P07560	215 aa	Known RBP	4.55	□□□□□ -1.68
KSS1	YGR040W	YER134C	P40081	178 aa		4.55	□□□□□ -1.68
KSS1	YGR040W	POR2	P40478	281 aa		4.55	□□□□□ -1.68
KSS1	YGR040W	WWM1	P43582	211 aa	Known RBP	4.55	□□□□□ -1.68
KSS1	YGR040W	AIM24	P47127	394 aa		4.55	□□□□□ -1.68
KSS1	YGR040W	YGL118C	P53132	145 aa		4.55	□□□□□ -1.68
KSS1	YGR040W	YPL080C	Q02826	108 aa		4.55	□□□□□ -1.68
KSS1	YGR040W	WIP1	Q2V2P8	89 aa		4.55	□□□□□ -1.68
KSS1	YGR040W	MEC1	P38111	2368 aa		4.55	□□□□□ -1.68
KSS1	YGR040W	RPL23A	P0CX41	137 aa	Known RBP	4.54	□□□□□ -1.68
KSS1	YGR040W	RPL23B	P0CX42	137 aa	Known RBP	4.54	□□□□□ -1.68
KSS1	YGR040W	YKL102C	P34249	101 aa		4.54	□□□□□ -1.68
KSS1	YGR040W	PAU16	P35994	123 aa		4.54	□□□□□ -1.68
KSS1	YGR040W	YMR141C	P40211	102 aa		4.54	□□□□□ -1.68
KSS1	YGR040W	CAB4	P53332	305 aa		4.54	□□□□□ -1.68
KSS1	YGR040W	UPS3	Q04006	179 aa		4.54	□□□□□ -1.68
KSS1	YGR040W	FSF1	Q12029	327 aa	Known RBP	4.54	□□□□□ -1.68
KSS1	YGR040W	UTP23	Q12339	254 aa	Known RBP	4.54	□□□□□ -1.68
KSS1	YGR040W	YLR342W-A	Q3E810	57 aa		4.54	□□□□□ -1.68
KSS1	YGR040W	Q0297	Q9ZZV8	51 aa		4.54	□□□□□ -1.68
KSS1	YGR040W	GSP1	P32835	219 aa	Known RBP	4.53	□□□□□ -1.68
KSS1	YGR040W	GSP2	P32836	220 aa	Known RBP	4.53	□□□□□ -1.68
KSS1	YGR040W	SNF11	P38956	169 aa		4.53	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms