RNA–Protein interactions for RNA: YEL005C

VAB2, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene VAB2, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAB2YEL005C SFT2P38166 215 aa0.99□□□□□ -2.25
VAB2YEL005C YPL067CQ02754 198 aa0.99□□□□□ -2.25
VAB2YEL005C YMR122CQ03879 124 aa0.99□□□□□ -2.25
VAB2YEL005C COA6Q3E846 104 aa0.99□□□□□ -2.25
VAB2YEL005C YGL149WP53116 101 aa0.98□□□□□ -2.25
VAB2YEL005C CSN9Q03981 162 aa0.98□□□□□ -2.25
VAB2YEL005C YOR385WQ08909 290 aa0.98□□□□□ -2.25
VAB2YEL005C YHR213WP0CI67 198 aa0.97□□□□□ -2.25
VAB2YEL005C NMT1P14743 455 aa0.97□□□□□ -2.25
VAB2YEL005C RPS1AP33442 255 aaKnown RBP0.97□□□□□ -2.25
VAB2YEL005C UTP11P34247 250 aaPredicted RBP0.97□□□□□ -2.25
VAB2YEL005C YHR140WP38842 239 aa0.97□□□□□ -2.25
VAB2YEL005C LST8P41318 303 aa0.97□□□□□ -2.25
VAB2YEL005C ATP14Q12349 124 aa0.97□□□□□ -2.25
VAB2YEL005C YMR141CP40211 102 aa0.96□□□□□ -2.26
VAB2YEL005C YGR017WP53210 297 aa0.96□□□□□ -2.26
VAB2YEL005C ELC1Q03071 99 aa0.96□□□□□ -2.26
VAB2YEL005C MED11Q99278 115 aa0.96□□□□□ -2.26
VAB2YEL005C PFY1P07274 126 aa0.95□□□□□ -2.26
VAB2YEL005C HAP3P13434 144 aa0.95□□□□□ -2.26
VAB2YEL005C QCR10P37299 77 aa0.95□□□□□ -2.26
VAB2YEL005C GIM4P40005 111 aaKnown RBP0.95□□□□□ -2.26
VAB2YEL005C COA4Q05809 96 aa0.95□□□□□ -2.26
VAB2YEL005C PRM3Q08931 133 aa0.95□□□□□ -2.26
VAB2YEL005C RPL40AP0CH08 128 aaKnown RBP0.94□□□□□ -2.26
VAB2YEL005C RPL40BP0CH09 128 aaKnown RBP0.94□□□□□ -2.26
VAB2YEL005C RPL14AP36105 138 aaKnown RBP0.94□□□□□ -2.26
VAB2YEL005C MRPL11P36521 249 aaPredicted RBP0.94□□□□□ -2.26
VAB2YEL005C RPL14BP38754 138 aaKnown RBP0.94□□□□□ -2.26
VAB2YEL005C HSP10P38910 106 aa0.94□□□□□ -2.26
VAB2YEL005C HPM1P40481 377 aa0.94□□□□□ -2.26
VAB2YEL005C MVB12P42939 101 aa0.94□□□□□ -2.26
VAB2YEL005C MPC1P53157 130 aaKnown RBP0.94□□□□□ -2.26
VAB2YEL005C BRP1P53194 125 aa0.94□□□□□ -2.26
VAB2YEL005C SDH7Q04401 133 aa0.94□□□□□ -2.26
VAB2YEL005C YCR050CP25630 102 aa0.93□□□□□ -2.26
VAB2YEL005C YLR296WQ05898 108 aa0.93□□□□□ -2.26
VAB2YEL005C LDB18Q07887 179 aa0.93□□□□□ -2.26
VAB2YEL005C GTT2Q12390 233 aa0.92□□□□□ -2.26
VAB2YEL005C PAU21P0CE86 164 aa0.91□□□□□ -2.26
VAB2YEL005C PAU22P0CE87 164 aa0.91□□□□□ -2.26
VAB2YEL005C SUA7P29055 345 aaPredicted RBP0.91□□□□□ -2.26
VAB2YEL005C PRS3P38689 320 aaKnown RBP0.91□□□□□ -2.26
VAB2YEL005C CYC2P38909 366 aa0.91□□□□□ -2.26
VAB2YEL005C YAL064WP39711 94 aa0.91□□□□□ -2.26
VAB2YEL005C SNT2P53127 1403 aa0.9□□□□□ -2.26
VAB2YEL005C RPL43AP0CX25 92 aaKnown RBP0.9□□□□□ -2.27
VAB2YEL005C RPL43BP0CX26 92 aa0.9□□□□□ -2.27
VAB2YEL005C TVP18Q04767 167 aa0.9□□□□□ -2.27
VAB2YEL005C YMR321CQ04898 105 aa0.9□□□□□ -2.27
VAB2YEL005C FIT3Q08907 204 aa0.9□□□□□ -2.27
VAB2YEL005C YNL277W-AQ3E7Z0 62 aa0.9□□□□□ -2.27
VAB2YEL005C HUG1Q6Q5K6 68 aa0.9□□□□□ -2.27
VAB2YEL005C GSP1P32835 219 aaKnown RBP0.89□□□□□ -2.27
VAB2YEL005C YBR013CP38215 129 aa0.89□□□□□ -2.27
VAB2YEL005C YGL204CP53089 101 aa0.89□□□□□ -2.27
VAB2YEL005C YGR042WP53227 271 aa0.89□□□□□ -2.27
VAB2YEL005C CNL1Q06333 122 aa0.89□□□□□ -2.27
VAB2YEL005C Q0144Q9ZZW2 109 aa0.89□□□□□ -2.27
VAB2YEL005C HYM1P32464 399 aa0.88□□□□□ -2.27
VAB2YEL005C PHS1P40857 217 aa0.88□□□□□ -2.27
VAB2YEL005C MIC27P50945 234 aa0.88□□□□□ -2.27
VAB2YEL005C FCF2Q12035 217 aaPredicted RBP0.88□□□□□ -2.27
VAB2YEL005C RPL36BO14455 100 aaKnown RBP0.87□□□□□ -2.27
VAB2YEL005C RPL36AP05745 100 aaPredicted RBP0.87□□□□□ -2.27
VAB2YEL005C AIM4P38305 123 aaPredicted RBP0.87□□□□□ -2.27
VAB2YEL005C RPS20P38701 121 aaKnown RBP0.87□□□□□ -2.27
VAB2YEL005C AIM18P38884 321 aa0.87□□□□□ -2.27
VAB2YEL005C YDR278CQ05612 105 aa0.87□□□□□ -2.27
VAB2YEL005C YSF3P0C074 85 aaPredicted RBP0.86□□□□□ -2.27
VAB2YEL005C ERV14P53173 138 aa0.86□□□□□ -2.27
VAB2YEL005C HPA2Q06592 156 aa0.85□□□□□ -2.27
VAB2YEL005C RTC6O14464 93 aa0.84□□□□□ -2.27
VAB2YEL005C MRPL31P14063 131 aaPredicted RBP0.84□□□□□ -2.27
VAB2YEL005C POP7P38291 140 aa0.84□□□□□ -2.27
VAB2YEL005C SPC2Q04969 178 aa0.84□□□□□ -2.27
VAB2YEL005C NKP2Q06162 153 aa0.84□□□□□ -2.27
VAB2YEL005C YOR034C-AQ3E735 80 aa0.84□□□□□ -2.27
VAB2YEL005C YLR361C-AQ3E795 98 aa0.84□□□□□ -2.27
VAB2YEL005C GSC2P40989 1895 aa0.84□□□□□ -2.28
VAB2YEL005C TY4B-JP47024 1803 aa0.83□□□□□ -2.28
VAB2YEL005C SEC59P20048 519 aa0.83□□□□□ -2.28
VAB2YEL005C SFT1P43682 97 aa0.83□□□□□ -2.28
VAB2YEL005C TIM8P57744 87 aa0.83□□□□□ -2.28
VAB2YEL005C SAE3P89114 91 aa0.83□□□□□ -2.28
VAB2YEL005C YLR307C-AQ3E825 87 aa0.83□□□□□ -2.28
VAB2YEL005C SRX1P36077 127 aa0.82□□□□□ -2.28
VAB2YEL005C TRS20P38334 175 aa0.82□□□□□ -2.28
VAB2YEL005C DYN2Q02647 92 aa0.82□□□□□ -2.28
VAB2YEL005C TRM732Q03496 1420 aa0.81□□□□□ -2.28
VAB2YEL005C YLR157W-EP0CF00 54 aa0.81□□□□□ -2.28
VAB2YEL005C PRP8P33334 2413 aaKnown RBP0.81□□□□□ -2.28
VAB2YEL005C EMP24P32803 203 aaKnown RBP0.8□□□□□ -2.28
VAB2YEL005C YIL163CP40448 117 aa0.8□□□□□ -2.28
VAB2YEL005C ENV10Q99382 181 aa0.8□□□□□ -2.28
VAB2YEL005C MRP49P32388 137 aa0.79□□□□□ -2.28
VAB2YEL005C YKL044WP36092 106 aa0.79□□□□□ -2.28
VAB2YEL005C POR2P40478 281 aa0.79□□□□□ -2.28
VAB2YEL005C YRF1-3P0CX14 1859 aa0.79□□□□□ -2.28
VAB2YEL005C YRF1-7P0CX15 1859 aa0.79□□□□□ -2.28
Retrieved 100 of 5,963 RNA–protein pairs in 26.6 ms