RNA–Protein interactions for RNA: YDR477W

SNF1, Transcript of AMP-activated serine/threonine protein kinase, yeastyeast

Gene SNF1, Length 1,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF1YDR477W ADH1P00330 348 aaKnown RBP8.25□□□□□ -1.09
SNF1YDR477W DMA2P53924 522 aa8.25□□□□□ -1.09
SNF1YDR477W VTS1Q08831 523 aaKnown RBP RIP-Chip data8.25□□□□□ -1.09not detected
SNF1YDR477W CYC7P00045 113 aa8.24□□□□□ -1.09
SNF1YDR477W CPT1P17898 393 aa8.24□□□□□ -1.09
SNF1YDR477W NRM1P53718 249 aa8.24□□□□□ -1.09
SNF1YDR477W DAD4P69851 72 aa8.23□□□□□ -1.09
SNF1YDR477W HYP2P23301 157 aaKnown RBP8.23□□□□□ -1.09
SNF1YDR477W YCR023CP25351 611 aa8.23□□□□□ -1.09
SNF1YDR477W HST4P53688 370 aa8.23□□□□□ -1.09
SNF1YDR477W RPL35AP0CX84 120 aaKnown RBP8.22□□□□□ -1.09
SNF1YDR477W RPL35BP0CX85 120 aaKnown RBP8.22□□□□□ -1.09
SNF1YDR477W CDC43P18898 376 aa8.22□□□□□ -1.09
SNF1YDR477W DFM1Q12743 341 aaKnown RBP8.22□□□□□ -1.09
SNF1YDR477W HTL1Q9URQ5 78 aa8.22□□□□□ -1.09
SNF1YDR477W HEM4P06174 275 aa8.21□□□□□ -1.09
SNF1YDR477W YKR032WP36127 104 aa8.21□□□□□ -1.09
SNF1YDR477W ECM14P38836 430 aa8.21□□□□□ -1.09
SNF1YDR477W LST8P41318 303 aa8.21□□□□□ -1.09
SNF1YDR477W GTO3Q04806 366 aa8.21□□□□□ -1.09
SNF1YDR477W FMP27Q06179 2628 aa8.21□□□□□ -1.1
SNF1YDR477W APS1P35181 156 aa8.21□□□□□ -1.1
SNF1YDR477W YDR042CQ03205 200 aa8.21□□□□□ -1.1
SNF1YDR477W YTH1Q06102 208 aaPredicted RBP8.21□□□□□ -1.1
SNF1YDR477W YKL044WP36092 106 aa8.2□□□□□ -1.1
SNF1YDR477W YMR105W-AQ8TGS8 64 aa8.2□□□□□ -1.1
SNF1YDR477W MIX17Q03667 156 aa8.19□□□□□ -1.1
SNF1YDR477W DAD1Q12248 94 aa8.19□□□□□ -1.1
SNF1YDR477W YPT53P36019 220 aa8.19□□□□□ -1.1
SNF1YDR477W GAT3Q07928 141 aa8.19□□□□□ -1.1
SNF1YDR477W DGA1Q08650 418 aa8.19□□□□□ -1.1
SNF1YDR477W RPL39P04650 51 aa8.18□□□□□ -1.1
SNF1YDR477W RPL27BP0C2H7 136 aaKnown RBP8.18□□□□□ -1.1
SNF1YDR477W DAL82P21705 255 aa8.18□□□□□ -1.1
SNF1YDR477W YKR045CP36138 183 aa8.18□□□□□ -1.1
SNF1YDR477W SNF11P38956 169 aa8.18□□□□□ -1.1
SNF1YDR477W MST28P39552 234 aa8.18□□□□□ -1.1
SNF1YDR477W YJR096WP47137 282 aa8.18□□□□□ -1.1
SNF1YDR477W YLR296WQ05898 108 aa8.18□□□□□ -1.1
SNF1YDR477W FOL3Q12676 427 aaPredicted RBP8.18□□□□□ -1.1
SNF1YDR477W YBR220CP38318 560 aa8.17□□□□□ -1.1
SNF1YDR477W SDH7Q04401 133 aa8.17□□□□□ -1.1
SNF1YDR477W RXT3Q07458 294 aa8.17□□□□□ -1.1
SNF1YDR477W GEP3Q08622 556 aa8.17□□□□□ -1.1
SNF1YDR477W IRA1P18963 3092 aa8.16□□□□□ -1.1
SNF1YDR477W YHR213WP0CI67 198 aa8.16□□□□□ -1.1
SNF1YDR477W TIR2P33890 251 aa8.16□□□□□ -1.1
SNF1YDR477W RPL15BP54780 204 aaPredicted RBP8.16□□□□□ -1.1
SNF1YDR477W YMR103CQ04436 120 aa8.16□□□□□ -1.1
SNF1YDR477W RPP2BP02400 110 aaKnown RBP8.15□□□□□ -1.1
SNF1YDR477W NCA3P46955 337 aa8.15□□□□□ -1.1
SNF1YDR477W YKL023C-AQ2V2P3 75 aa8.15□□□□□ -1.1
SNF1YDR477W MBB1P39534 108 aa8.15□□□□□ -1.11
SNF1YDR477W YJL213WP40896 331 aa8.15□□□□□ -1.11
SNF1YDR477W IMP2P46972 177 aa8.15□□□□□ -1.11
SNF1YDR477W YJL163CP46996 555 aa8.15□□□□□ -1.11
SNF1YDR477W MOT3P54785 490 aaKnown RBP8.15□□□□□ -1.11
SNF1YDR477W GLE2P40066 365 aa8.14□□□□□ -1.11
SNF1YDR477W YPL073CP40323 161 aa8.14□□□□□ -1.11
SNF1YDR477W BNA2P47125 453 aa8.13□□□□□ -1.11
SNF1YDR477W ABM1P47146 123 aa8.13□□□□□ -1.11
SNF1YDR477W ELC1Q03071 99 aa8.13□□□□□ -1.11
SNF1YDR477W PRE3P38624 215 aa8.13□□□□□ -1.11
SNF1YDR477W PRM3Q08931 133 aa8.13□□□□□ -1.11
SNF1YDR477W RPL27AP0C2H6 136 aaKnown RBP8.12□□□□□ -1.11
SNF1YDR477W SPC29P33419 253 aa8.12□□□□□ -1.11
SNF1YDR477W MST27P53176 234 aa8.12□□□□□ -1.11
SNF1YDR477W DIA1P54005 336 aa8.12□□□□□ -1.11
SNF1YDR477W SNU13P39990 126 aaKnown RBP8.11□□□□□ -1.11
SNF1YDR477W GPI19Q04082 140 aa8.11□□□□□ -1.11
SNF1YDR477W MSA1Q08471 629 aa8.11□□□□□ -1.11
SNF1YDR477W YLR112WQ12130 139 aa8.11□□□□□ -1.11
SNF1YDR477W RPS23AP0CX29 145 aaKnown RBP8.11□□□□□ -1.11
SNF1YDR477W RPS23BP0CX30 145 aa8.11□□□□□ -1.11
SNF1YDR477W YEL067CP39978 195 aa8.11□□□□□ -1.11
SNF1YDR477W SUR7P54003 302 aa8.11□□□□□ -1.11
SNF1YDR477W MGR2Q02889 113 aa8.11□□□□□ -1.11
SNF1YDR477W AQY1P0CD91 305 aa8.1□□□□□ -1.11
SNF1YDR477W YKR041WP36134 250 aa8.1□□□□□ -1.11
SNF1YDR477W RRT1P38192 103 aa8.09□□□□□ -1.11
SNF1YDR477W RPS26AP39938 119 aaKnown RBP8.09□□□□□ -1.11
SNF1YDR477W YFL051CP43552 160 aa8.09□□□□□ -1.11
SNF1YDR477W YLR342W-AQ3E810 57 aa8.09□□□□□ -1.11
SNF1YDR477W GPI18P38211 433 aa8.08□□□□□ -1.12
SNF1YDR477W CTR2P38865 189 aa8.08□□□□□ -1.12
SNF1YDR477W YJL027CP47063 138 aaPredicted RBP8.08□□□□□ -1.12
SNF1YDR477W YNL234WP53857 426 aa8.08□□□□□ -1.12
SNF1YDR477W YPR117WQ06116 2489 aa8.08□□□□□ -1.12
SNF1YDR477W YDL022C-AP0C5L6 82 aa8.07□□□□□ -1.12
SNF1YDR477W MRPL20P22354 195 aaPredicted RBP8.07□□□□□ -1.12
SNF1YDR477W ADH5P38113 351 aaKnown RBP8.07□□□□□ -1.12
SNF1YDR477W YER076CP40049 302 aa8.07□□□□□ -1.12
SNF1YDR477W YNL184CP53876 108 aa8.07□□□□□ -1.12
SNF1YDR477W FCF1Q05498 189 aaPredicted RBP8.07□□□□□ -1.12
SNF1YDR477W IRC23Q08416 157 aa8.07□□□□□ -1.12
SNF1YDR477W RPP2AP05319 106 aaKnown RBP8.07□□□□□ -1.12
SNF1YDR477W PCL2P25693 308 aa8.07□□□□□ -1.12
SNF1YDR477W CMC1P36064 111 aa8.07□□□□□ -1.12
SNF1YDR477W YHR140WP38842 239 aa8.06□□□□□ -1.12
SNF1YDR477W YER181CP40097 107 aa8.06□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 55.6 ms