RNA–Protein interactions for RNA: YDR328C

SKP1, Transcript of Evolutionarily conserved kinetochore protein, yeast

Gene SKP1, Length 585 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP1	YDR328C	DAD4	P69851	72 aa		5.59	□□□□□ -1.51
SKP1	YDR328C	YOR105W	Q08504	108 aa		5.59	□□□□□ -1.51
SKP1	YDR328C	YNL146C-A	Q3E7Z1	64 aa		5.59	□□□□□ -1.51
SKP1	YDR328C	YCL001W-B	Q96VH2	84 aa		5.59	□□□□□ -1.51
SKP1	YDR328C	PRE9	P23638	258 aa	Known RBP	5.58	□□□□□ -1.52
SKP1	YDR328C	YGL010W	P25338	174 aa		5.58	□□□□□ -1.52
SKP1	YDR328C	LSM8	P47093	109 aa	Known RBP	5.58	□□□□□ -1.52
SKP1	YDR328C	YDL183C	P48569	320 aa		5.58	□□□□□ -1.52
SKP1	YDR328C	YGR026W	P53217	278 aa		5.58	□□□□□ -1.52
SKP1	YDR328C	YIP3	P53633	176 aa		5.58	□□□□□ -1.52
SKP1	YDR328C	RRG8	Q06109	277 aa		5.58	□□□□□ -1.52
SKP1	YDR328C	PAU19	P0CE85	124 aa		5.57	□□□□□ -1.52
SKP1	YDR328C	PAU21	P0CE86	164 aa		5.57	□□□□□ -1.52
SKP1	YDR328C	PAU22	P0CE87	164 aa		5.57	□□□□□ -1.52
SKP1	YDR328C	HMRA1	P0CY11	126 aa		5.57	□□□□□ -1.52
SKP1	YDR328C	PAU3	P25610	124 aa		5.57	□□□□□ -1.52
SKP1	YDR328C	MIX23	P38162	196 aa		5.57	□□□□□ -1.52
SKP1	YDR328C	MPC2	P38857	129 aa		5.57	□□□□□ -1.52
SKP1	YDR328C	PRE5	P40302	234 aa	Known RBP	5.57	□□□□□ -1.52
SKP1	YDR328C	SIM1	P40472	476 aa		5.57	□□□□□ -1.52
SKP1	YDR328C	GIM5	Q04493	163 aa		5.57	□□□□□ -1.52
SKP1	YDR328C	TRI1	Q05024	226 aa		5.57	□□□□□ -1.52
SKP1	YDR328C	DAD1	Q12248	94 aa		5.57	□□□□□ -1.52
SKP1	YDR328C	UTP23	Q12339	254 aa	Known RBP	5.57	□□□□□ -1.52
SKP1	YDR328C	PRM7	Q12459	698 aa		5.57	□□□□□ -1.52
SKP1	YDR328C	YOR011W-A	Q3E807	68 aa		5.57	□□□□□ -1.52
SKP1	YDR328C	DYN1	P36022	4092 aa		5.57	□□□□□ -1.52
SKP1	YDR328C	CPT1	P17898	393 aa		5.56	□□□□□ -1.52
SKP1	YDR328C	GET2	P40056	285 aa		5.56	□□□□□ -1.52
SKP1	YDR328C	YFR045W	P43617	309 aa		5.56	□□□□□ -1.52
SKP1	YDR328C	CCW12	Q12127	133 aa		5.56	□□□□□ -1.52
SKP1	YDR328C	YLR342W-A	Q3E810	57 aa		5.56	□□□□□ -1.52
SKP1	YDR328C	YNR034W-A	Q3E841	98 aa		5.56	□□□□□ -1.52
SKP1	YDR328C	MRPL31	P14063	131 aa	Predicted RBP	5.55	□□□□□ -1.52
SKP1	YDR328C	CUP2	P15315	225 aa		5.55	□□□□□ -1.52
SKP1	YDR328C	RTG1	P32607	177 aa		5.55	□□□□□ -1.52
SKP1	YDR328C	ECM33	P38248	429 aa	Known RBP	5.55	□□□□□ -1.52
SKP1	YDR328C	YPL162C	Q12042	273 aa		5.55	□□□□□ -1.52
SKP1	YDR328C	YPR063C	Q12160	140 aa		5.55	□□□□□ -1.52
SKP1	YDR328C	DAD2	P36162	133 aa		5.54	□□□□□ -1.52
SKP1	YDR328C	YHR022C	P38763	256 aa		5.54	□□□□□ -1.52
SKP1	YDR328C	IRC22	P40006	225 aa		5.54	□□□□□ -1.52
SKP1	YDR328C	YJR096W	P47137	282 aa		5.54	□□□□□ -1.52
SKP1	YDR328C	NUP42	P49686	430 aa	Known RBP	5.54	□□□□□ -1.52
SKP1	YDR328C	MIC26	P50087	233 aa		5.54	□□□□□ -1.52
SKP1	YDR328C	ALG13	P53178	202 aa		5.54	□□□□□ -1.52
SKP1	YDR328C	YMR244W	Q04018	355 aa		5.54	□□□□□ -1.52
SKP1	YDR328C	ATG33	Q06485	197 aa		5.54	□□□□□ -1.52
SKP1	YDR328C	RPL12A	P0CX53	165 aa	Known RBP	5.53	□□□□□ -1.52
SKP1	YDR328C	RPL12B	P0CX54	165 aa		5.53	□□□□□ -1.52
SKP1	YDR328C	PAM17	P36147	197 aa		5.53	□□□□□ -1.52
SKP1	YDR328C	SUR2	P38992	349 aa		5.53	□□□□□ -1.52
SKP1	YDR328C	YER135C	P40082	130 aa		5.53	□□□□□ -1.52
SKP1	YDR328C	MDM10	P18409	493 aa		5.52	□□□□□ -1.53
SKP1	YDR328C	MIG1	P27705	504 aa		5.52	□□□□□ -1.53
SKP1	YDR328C	RPB11	P38902	120 aa		5.52	□□□□□ -1.53
SKP1	YDR328C	YDR274C	P87283	123 aa		5.52	□□□□□ -1.53
SKP1	YDR328C	VPS71	Q03433	280 aa		5.52	□□□□□ -1.53
SKP1	YDR328C	MRPS8	Q03799	155 aa		5.52	□□□□□ -1.53
SKP1	YDR328C	UPS3	Q04006	179 aa		5.52	□□□□□ -1.53
SKP1	YDR328C	YDR215C	Q12240	137 aa		5.52	□□□□□ -1.53
SKP1	YDR328C	POP7	P38291	140 aa		5.51	□□□□□ -1.53
SKP1	YDR328C	MIG3	P39943	394 aa		5.51	□□□□□ -1.53
SKP1	YDR328C	COX16	P47081	118 aa		5.51	□□□□□ -1.53
SKP1	YDR328C	ARC18	Q05933	178 aa	Known RBP	5.51	□□□□□ -1.53
SKP1	YDR328C	TIM22	Q12328	207 aa		5.51	□□□□□ -1.53
SKP1	YDR328C	CMC2	Q3E7A4	109 aa		5.51	□□□□□ -1.53
SKP1	YDR328C	VAR1	P02381	398 aa		5.5	□□□□□ -1.53
SKP1	YDR328C	POR1	P04840	283 aa	Known RBP	5.5	□□□□□ -1.53
SKP1	YDR328C	GRH1	Q04410	372 aa	Known RBP	5.5	□□□□□ -1.53
SKP1	YDR328C	YOL085C	Q99345	113 aa		5.5	□□□□□ -1.53
SKP1	YDR328C	VMA16	P23968	213 aa		5.49	□□□□□ -1.53
SKP1	YDR328C	PAU7	P39545	55 aa		5.49	□□□□□ -1.53
SKP1	YDR328C	YGR149W	P48236	432 aa		5.49	□□□□□ -1.53
SKP1	YDR328C	CSM4	Q08955	156 aa		5.49	□□□□□ -1.53
SKP1	YDR328C	RPS22B	Q3E7Y3	130 aa	Known RBP	5.49	□□□□□ -1.53
SKP1	YDR328C	AGA1	P32323	725 aa		5.48	□□□□□ -1.53
SKP1	YDR328C	CYT2	Q00873	224 aa		5.48	□□□□□ -1.53
SKP1	YDR328C	ARL3	Q02804	198 aa		5.48	□□□□□ -1.53
SKP1	YDR328C	MHR1	Q06630	226 aa		5.48	□□□□□ -1.53
SKP1	YDR328C	YCR024C-B	Q3E7Z8	88 aa		5.48	□□□□□ -1.53
SKP1	YDR328C	RPL27A	P0C2H6	136 aa	Known RBP	5.47	□□□□□ -1.53
SKP1	YDR328C	MRPL28	P36527	147 aa		5.47	□□□□□ -1.53
SKP1	YDR328C	SOH1	P38633	127 aa		5.47	□□□□□ -1.53
SKP1	YDR328C	YFR035C	P43608	114 aa		5.47	□□□□□ -1.53
SKP1	YDR328C	SDS23	P53172	527 aa		5.47	□□□□□ -1.53
SKP1	YDR328C	THG1	P53215	237 aa	Known RBP	5.47	□□□□□ -1.53
SKP1	YDR328C	DIA1	P54005	336 aa		5.47	□□□□□ -1.53
SKP1	YDR328C	POM33	Q12164	279 aa		5.47	□□□□□ -1.53
SKP1	YDR328C	AIR2	Q12476	344 aa	Known RBP	5.47	□□□□□ -1.53
SKP1	YDR328C	RPL23A	P0CX41	137 aa	Known RBP	5.46	□□□□□ -1.54
SKP1	YDR328C	RPL23B	P0CX42	137 aa	Known RBP	5.46	□□□□□ -1.54
SKP1	YDR328C	YHR140W	P38842	239 aa		5.46	□□□□□ -1.54
SKP1	YDR328C	GPI19	Q04082	140 aa		5.46	□□□□□ -1.54
SKP1	YDR328C	SEC4	P07560	215 aa	Known RBP	5.45	□□□□□ -1.54
SKP1	YDR328C	TY1A-H	P0C2I4	478 aa	Known RBP	5.45	□□□□□ -1.54
SKP1	YDR328C	ZRT1	P32804	376 aa		5.45	□□□□□ -1.54
SKP1	YDR328C	KEG1	P43614	200 aa		5.45	□□□□□ -1.54
SKP1	YDR328C	GTO3	Q04806	366 aa		5.45	□□□□□ -1.54
SKP1	YDR328C	FSF1	Q12029	327 aa	Known RBP	5.45	□□□□□ -1.54

Retrieved 100 of 5,963 RNA–protein pairs in 90.6 ms