RNA–Protein interactions for RNA: YDR179C

CSN9, Transcript of Subunit of the Cop9 signalosome, yeastyeast

Gene CSN9, Length 489 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSN9YDR179C YDR476CQ03362 224 aa-0.9□□□□□ -2.55
CSN9YDR179C YLR296WQ05898 108 aa-0.9□□□□□ -2.55
CSN9YDR179C ATX1P38636 73 aa-0.91□□□□□ -2.56
CSN9YDR179C MAK3Q03503 176 aa-0.91□□□□□ -2.56
CSN9YDR179C RAF1Q06891 181 aa-0.91□□□□□ -2.56
CSN9YDR179C APQ12P40532 138 aa-0.92□□□□□ -2.56
CSN9YDR179C YIP3P53633 176 aa-0.92□□□□□ -2.56
CSN9YDR179C TY4B-JP47024 1803 aa-0.93□□□□□ -2.56
CSN9YDR179C YHR173CP38864 112 aa-0.93□□□□□ -2.56
CSN9YDR179C YGL149WP53116 101 aa-0.93□□□□□ -2.56
CSN9YDR179C YNL190WP53872 204 aa-0.93□□□□□ -2.56
CSN9YDR179C SOM1Q05676 74 aa-0.93□□□□□ -2.56
CSN9YDR179C YBR072C-AQ3E794 53 aa-0.93□□□□□ -2.56
CSN9YDR179C SNT2P53127 1403 aa-0.94□□□□□ -2.56
CSN9YDR179C HAP3P13434 144 aa-0.95□□□□□ -2.56
CSN9YDR179C MRPL44P19956 98 aa-0.95□□□□□ -2.56
CSN9YDR179C SUA7P29055 345 aaPredicted RBP-0.95□□□□□ -2.56
CSN9YDR179C GSP1P32835 219 aaKnown RBP-0.95□□□□□ -2.56
CSN9YDR179C EGD2P38879 174 aaKnown RBP-0.95□□□□□ -2.56
CSN9YDR179C YJL218WP40892 196 aaKnown RBP-0.95□□□□□ -2.56
CSN9YDR179C YLR053CQ12026 108 aa-0.95□□□□□ -2.56
CSN9YDR179C FCF2Q12035 217 aaPredicted RBP-0.95□□□□□ -2.56
CSN9YDR179C GTT2Q12390 233 aa-0.95□□□□□ -2.56
CSN9YDR179C PBI2P0CT04 75 aaKnown RBP-0.96□□□□□ -2.56
CSN9YDR179C HSP12P22943 109 aaKnown RBP-0.96□□□□□ -2.56
CSN9YDR179C HHO1P53551 258 aa-0.96□□□□□ -2.56
CSN9YDR179C LCL1Q02786 101 aa-0.96□□□□□ -2.56
CSN9YDR179C DDP1Q99321 188 aaKnown RBP-0.96□□□□□ -2.56
CSN9YDR179C SEC16P48415 2195 aaKnown RBP-0.97□□□□□ -2.56
CSN9YDR179C BRP1P53194 125 aa-0.97□□□□□ -2.56
CSN9YDR179C OCA6Q12454 224 aa-0.97□□□□□ -2.56
CSN9YDR179C EFG1Q3E705 233 aaKnown RBP-0.97□□□□□ -2.56
CSN9YDR179C ENV10Q99382 181 aa-0.97□□□□□ -2.56
CSN9YDR179C POL2P21951 2222 aaKnown RBP-0.97□□□□□ -2.57
CSN9YDR179C YIL163CP40448 117 aa-0.98□□□□□ -2.57
CSN9YDR179C LSM8P47093 109 aaKnown RBP-0.98□□□□□ -2.57
CSN9YDR179C YGR240C-AQ3E786 66 aa-0.98□□□□□ -2.57
CSN9YDR179C YRF1-3P0CX14 1859 aa-0.99□□□□□ -2.57
CSN9YDR179C YRF1-7P0CX15 1859 aa-0.99□□□□□ -2.57
CSN9YDR179C YBR056W-AI2HB52 66 aa-0.99□□□□□ -2.57
CSN9YDR179C ICS3P47034 131 aa-0.99□□□□□ -2.57
CSN9YDR179C TY1B-HO13535 1793 aa-0.99□□□□□ -2.57
CSN9YDR179C FIG1P38224 298 aa-1□□□□□ -2.57
CSN9YDR179C AIM18P38884 321 aa-1□□□□□ -2.57
CSN9YDR179C LSM1P47017 172 aaKnown RBP-1□□□□□ -2.57
CSN9YDR179C YPR202WQ08993 238 aa-1□□□□□ -2.57
CSN9YDR179C BRR2P32639 2163 aaKnown RBP-1.01□□□□□ -2.57
CSN9YDR179C RPA12P32529 125 aaKnown RBP-1.01□□□□□ -2.57
CSN9YDR179C EFM5P53200 248 aaKnown RBP-1.01□□□□□ -2.57
CSN9YDR179C YOR385WQ08909 290 aa-1.01□□□□□ -2.57
CSN9YDR179C GIM3P53900 129 aa-1.02□□□□□ -2.57
CSN9YDR179C RTC6O14464 93 aa-1.03□□□□□ -2.57
CSN9YDR179C RPL35AP0CX84 120 aaKnown RBP-1.03□□□□□ -2.57
CSN9YDR179C RPL35BP0CX85 120 aaKnown RBP-1.03□□□□□ -2.57
CSN9YDR179C RPS1AP33442 255 aaKnown RBP-1.03□□□□□ -2.57
CSN9YDR179C SPG1P50088 95 aa-1.03□□□□□ -2.57
CSN9YDR179C HPA2Q06592 156 aa-1.03□□□□□ -2.57
CSN9YDR179C VPS51P36116 164 aa-1.04□□□□□ -2.58
CSN9YDR179C HSP10P38910 106 aa-1.04□□□□□ -2.58
CSN9YDR179C YGR201CP42936 225 aa-1.04□□□□□ -2.58
CSN9YDR179C YGL041C-BQ3E750 60 aa-1.04□□□□□ -2.58
CSN9YDR179C PET20Q99373 253 aa-1.04□□□□□ -2.58
CSN9YDR179C UBR1P19812 1950 aa-1.05□□□□□ -2.58
CSN9YDR179C RPL36BO14455 100 aaKnown RBP-1.05□□□□□ -2.58
CSN9YDR179C RPL36AP05745 100 aaPredicted RBP-1.05□□□□□ -2.58
CSN9YDR179C PRS3P38689 320 aaKnown RBP-1.06□□□□□ -2.58
CSN9YDR179C YGR017WP53210 297 aa-1.06□□□□□ -2.58
CSN9YDR179C MRPS12P53732 153 aa-1.06□□□□□ -2.58
CSN9YDR179C PAU21P0CE86 164 aa-1.07□□□□□ -2.58
CSN9YDR179C PAU22P0CE87 164 aa-1.07□□□□□ -2.58
CSN9YDR179C SDH7Q04401 133 aa-1.07□□□□□ -2.58
CSN9YDR179C QCR10P37299 77 aa-1.08□□□□□ -2.58
CSN9YDR179C RAV2Q03956 351 aa-1.08□□□□□ -2.58
CSN9YDR179C RPL22AP05749 121 aaKnown RBP-1.1□□□□□ -2.59
CSN9YDR179C SUI1P32911 108 aaKnown RBP-1.1□□□□□ -2.59
CSN9YDR179C CCW14O13547 238 aa-1.11□□□□□ -2.59
CSN9YDR179C PHS1P40857 217 aa-1.12□□□□□ -2.59
CSN9YDR179C SGF11Q03067 99 aa-1.12□□□□□ -2.59
CSN9YDR179C GIM5Q04493 163 aa-1.12□□□□□ -2.59
CSN9YDR179C NSL1Q12143 216 aa-1.12□□□□□ -2.59
CSN9YDR179C RPS28BP0C0X0 67 aaKnown RBP-1.13□□□□□ -2.59
CSN9YDR179C RPS28AQ3E7X9 67 aaPredicted RBP-1.13□□□□□ -2.59
CSN9YDR179C ADK1P07170 222 aaKnown RBP-1.14□□□□□ -2.59
CSN9YDR179C QCR2P07257 368 aa-1.14□□□□□ -2.59
CSN9YDR179C YAP3P38749 330 aa-1.14□□□□□ -2.59
CSN9YDR179C TY4B-HP0C2J7 1802 aa-1.15□□□□□ -2.59
CSN9YDR179C RUB1Q03919 77 aa-1.15□□□□□ -2.59
CSN9YDR179C ECM5Q03214 1411 aa-1.15□□□□□ -2.59
CSN9YDR179C ARC19P33204 171 aaKnown RBP-1.17□□□□□ -2.6
CSN9YDR179C YDR366CP87287 132 aa-1.17□□□□□ -2.6
CSN9YDR179C GCV3P39726 170 aaPredicted RBP-1.18□□□□□ -2.6
CSN9YDR179C YPK9Q12697 1472 aa-1.18□□□□□ -2.6
CSN9YDR179C DER1P38307 211 aa-1.19□□□□□ -2.6
CSN9YDR179C YAL064WP39711 94 aa-1.19□□□□□ -2.6
CSN9YDR179C HPM1P40481 377 aa-1.2□□□□□ -2.6
CSN9YDR179C PKR1Q03880 122 aaKnown RBP-1.2□□□□□ -2.6
CSN9YDR179C ATG38Q05789 226 aaKnown RBP-1.2□□□□□ -2.6
CSN9YDR179C RPO41P13433 1351 aaKnown RBP-1.21□□□□□ -2.6
CSN9YDR179C YCR050CP25630 102 aa-1.21□□□□□ -2.6
CSN9YDR179C AME1P38313 324 aa-1.21□□□□□ -2.6
Retrieved 100 of 5,963 RNA–protein pairs in 36.6 ms