RNA–Protein interactions for RNA: YDL139C

SCM3, Transcript of Nonhistone component of centromeric chromatin, yeastyeast

Gene SCM3, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCM3YDL139C RPS22AP0C0W1 130 aaKnown RBP3.89□□□□□ -1.79
SCM3YDL139C NHP6AP11632 93 aaKnown RBP3.89□□□□□ -1.79
SCM3YDL139C CPT1P17898 393 aa3.89□□□□□ -1.79
SCM3YDL139C INO2P26798 304 aa3.89□□□□□ -1.79
SCM3YDL139C HMX1P32339 317 aa3.89□□□□□ -1.79
SCM3YDL139C YHR173CP38864 112 aa3.89□□□□□ -1.79
SCM3YDL139C MST28P39552 234 aa3.89□□□□□ -1.79
SCM3YDL139C MST27P53176 234 aa3.89□□□□□ -1.79
SCM3YDL139C CAX4P53223 239 aa3.89□□□□□ -1.79
SCM3YDL139C SSU72P53538 206 aaPredicted RBP3.89□□□□□ -1.79
SCM3YDL139C YNR034W-AQ3E841 98 aa3.89□□□□□ -1.79
SCM3YDL139C HTB2P02294 131 aa3.88□□□□□ -1.79
SCM3YDL139C PAU19P0CE85 124 aa3.88□□□□□ -1.79
SCM3YDL139C PAU21P0CE86 164 aa3.88□□□□□ -1.79
SCM3YDL139C PAU22P0CE87 164 aa3.88□□□□□ -1.79
SCM3YDL139C SEC59P20048 519 aa3.88□□□□□ -1.79
SCM3YDL139C PAU3P25610 124 aa3.88□□□□□ -1.79
SCM3YDL139C QRI5P32344 111 aa3.88□□□□□ -1.79
SCM3YDL139C TIR2P33890 251 aa3.88□□□□□ -1.79
SCM3YDL139C YER134CP40081 178 aa3.88□□□□□ -1.79
SCM3YDL139C YNL200CP40165 246 aaKnown RBP3.88□□□□□ -1.79
SCM3YDL139C FPR2P32472 135 aa3.87□□□□□ -1.79
SCM3YDL139C SSS1P35179 80 aa3.87□□□□□ -1.79
SCM3YDL139C YKR032WP36127 104 aa3.87□□□□□ -1.79
SCM3YDL139C RRT1P38192 103 aa3.87□□□□□ -1.79
SCM3YDL139C HSP10P38910 106 aa3.87□□□□□ -1.79
SCM3YDL139C SAS2P40963 338 aa3.87□□□□□ -1.79
SCM3YDL139C CDC40P40968 455 aaPredicted RBP3.87□□□□□ -1.79
SCM3YDL139C YIP1P53039 248 aa3.87□□□□□ -1.79
SCM3YDL139C SDS23P53172 527 aa3.87□□□□□ -1.79
SCM3YDL139C PRM7Q12459 698 aa3.87□□□□□ -1.79
SCM3YDL139C YIL134C-AQ45U18 67 aa3.87□□□□□ -1.79
SCM3YDL139C MRPL31P14063 131 aaPredicted RBP3.86□□□□□ -1.79
SCM3YDL139C YGR017WP53210 297 aa3.86□□□□□ -1.79
SCM3YDL139C DCN1Q12395 269 aa3.86□□□□□ -1.79
SCM3YDL139C ILV5P06168 395 aaKnown RBP3.85□□□□□ -1.79
SCM3YDL139C MRS1P07266 363 aa3.85□□□□□ -1.79
SCM3YDL139C DDI2P0CH63 225 aa3.85□□□□□ -1.79
SCM3YDL139C DDI3P0CH64 225 aa3.85□□□□□ -1.79
SCM3YDL139C HSP12P22943 109 aaKnown RBP3.85□□□□□ -1.79
SCM3YDL139C GSP1P32835 219 aaKnown RBP3.85□□□□□ -1.79
SCM3YDL139C GSP2P32836 220 aaKnown RBP3.85□□□□□ -1.79
SCM3YDL139C SPI1P40092 148 aa3.85□□□□□ -1.79
SCM3YDL139C CYB5P40312 120 aa3.85□□□□□ -1.79
SCM3YDL139C SIM1P40472 476 aa3.85□□□□□ -1.79
SCM3YDL139C AGE2P40529 298 aa3.85□□□□□ -1.79
SCM3YDL139C YFR045WP43617 309 aa3.85□□□□□ -1.79
SCM3YDL139C VPS55P47111 140 aa3.85□□□□□ -1.79
SCM3YDL139C OST3P48439 350 aa3.85□□□□□ -1.79
SCM3YDL139C BRP1P53194 125 aa3.85□□□□□ -1.79
SCM3YDL139C DAD4P69851 72 aa3.85□□□□□ -1.79
SCM3YDL139C ATG39Q06159 398 aa3.85□□□□□ -1.79
SCM3YDL139C MSA1Q08471 629 aa3.85□□□□□ -1.79
SCM3YDL139C YOR105WQ08504 108 aa3.85□□□□□ -1.79
SCM3YDL139C SMT3Q12306 101 aaKnown RBP3.85□□□□□ -1.79
SCM3YDL139C RPL15AP05748 204 aaKnown RBP3.84□□□□□ -1.79
SCM3YDL139C TIR1P10863 254 aa3.84□□□□□ -1.79
SCM3YDL139C RPB9P27999 122 aa3.84□□□□□ -1.79
SCM3YDL139C SUA7P29055 345 aaPredicted RBP3.84□□□□□ -1.79
SCM3YDL139C MIC12P38341 106 aa3.84□□□□□ -1.79
SCM3YDL139C TOS8P53147 276 aa3.84□□□□□ -1.79
SCM3YDL139C MRX11Q03079 207 aa3.84□□□□□ -1.79
SCM3YDL139C PKR1Q03880 122 aaKnown RBP3.84□□□□□ -1.79
SCM3YDL139C FSF1Q12029 327 aaKnown RBP3.84□□□□□ -1.79
SCM3YDL139C YOR011W-AQ3E807 68 aa3.84□□□□□ -1.79
SCM3YDL139C RPB11P38902 120 aa3.83□□□□□ -1.8
SCM3YDL139C PRE5P40302 234 aaKnown RBP3.83□□□□□ -1.8
SCM3YDL139C RPR2P40571 144 aa3.83□□□□□ -1.8
SCM3YDL139C TDA4P47153 279 aa3.83□□□□□ -1.8
SCM3YDL139C ATP19P81451 68 aa3.83□□□□□ -1.8
SCM3YDL139C CUE4Q04201 117 aaPredicted RBP3.83□□□□□ -1.8
SCM3YDL139C RPL23AP0CX41 137 aaKnown RBP3.82□□□□□ -1.8
SCM3YDL139C RPL23BP0CX42 137 aaKnown RBP3.82□□□□□ -1.8
SCM3YDL139C PHO85P17157 305 aa3.82□□□□□ -1.8
SCM3YDL139C PRE1P22141 198 aaKnown RBP3.82□□□□□ -1.8
SCM3YDL139C SCM4P32564 187 aa3.82□□□□□ -1.8
SCM3YDL139C YHL044WP38727 235 aa3.82□□□□□ -1.8
SCM3YDL139C ARC18Q05933 178 aaKnown RBP3.82□□□□□ -1.8
SCM3YDL139C ZEO1Q08245 113 aa3.82□□□□□ -1.8
SCM3YDL139C CSM4Q08955 156 aa3.82□□□□□ -1.8
SCM3YDL139C DFM1Q12743 341 aaKnown RBP3.82□□□□□ -1.8
SCM3YDL139C SCS22Q6Q595 175 aa3.82□□□□□ -1.8
SCM3YDL139C UTP20P35194 2493 aaKnown RBP3.82□□□□□ -1.8
SCM3YDL139C CCW14O13547 238 aa3.81□□□□□ -1.8
SCM3YDL139C YCL042WP25572 119 aa3.81□□□□□ -1.8
SCM3YDL139C PRS4P38063 326 aaPredicted RBP3.81□□□□□ -1.8
SCM3YDL139C TEM1P38987 245 aa3.81□□□□□ -1.8
SCM3YDL139C APS2Q00381 147 aa3.81□□□□□ -1.8
SCM3YDL139C GIM5Q04493 163 aa3.81□□□□□ -1.8
SCM3YDL139C MSC3Q05812 728 aa3.81□□□□□ -1.8
SCM3YDL139C HOR7Q05827 59 aa3.81□□□□□ -1.8
SCM3YDL139C YPR063CQ12160 140 aa3.81□□□□□ -1.8
SCM3YDL139C ZRT1P32804 376 aa3.8□□□□□ -1.8
SCM3YDL139C YHR022CP38763 256 aa3.8□□□□□ -1.8
SCM3YDL139C MIG3P39943 394 aa3.8□□□□□ -1.8
SCM3YDL139C CAB4P53332 305 aa3.8□□□□□ -1.8
SCM3YDL139C YIL014C-AQ02598 104 aa3.8□□□□□ -1.8
SCM3YDL139C SPG4Q04438 115 aa3.8□□□□□ -1.8
SCM3YDL139C YER135CP40082 130 aa3.79□□□□□ -1.8
SCM3YDL139C POR2P40478 281 aa3.79□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 19.4 ms