RNA–Protein interactions for RNA: YDL085W

NDE2, Transcript of Mitochondrial external NADH dehydrogenase, yeastyeast

Gene NDE2, Length 1,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NDE2YDL085W EOS1P53938 366 aa6.39□□□□□ -1.39
NDE2YDL085W ADH6Q04894 360 aaKnown RBP6.39□□□□□ -1.39
NDE2YDL085W FSF1Q12029 327 aaKnown RBP6.39□□□□□ -1.39
NDE2YDL085W MRPL31P14063 131 aaPredicted RBP6.38□□□□□ -1.39
NDE2YDL085W CPR1P14832 162 aaKnown RBP6.38□□□□□ -1.39
NDE2YDL085W HST4P53688 370 aa6.38□□□□□ -1.39
NDE2YDL085W ARC18Q05933 178 aaKnown RBP6.38□□□□□ -1.39
NDE2YDL085W ATG33Q06485 197 aa6.38□□□□□ -1.39
NDE2YDL085W YLR050CQ12155 161 aaKnown RBP6.38□□□□□ -1.39
NDE2YDL085W YCL048W-AQ2V2Q2 79 aa6.38□□□□□ -1.39
NDE2YDL085W YFL068WP0CX99 160 aa6.37□□□□□ -1.39
NDE2YDL085W YLL066W-AP0CY00 160 aa6.37□□□□□ -1.39
NDE2YDL085W YLL067W-AP0CY01 160 aa6.37□□□□□ -1.39
NDE2YDL085W FZF1P32805 299 aa6.37□□□□□ -1.39
NDE2YDL085W PRS4P38063 326 aaPredicted RBP6.37□□□□□ -1.39
NDE2YDL085W LSM2P38203 95 aaKnown RBP6.37□□□□□ -1.39
NDE2YDL085W MIC26P50087 233 aa6.37□□□□□ -1.39
NDE2YDL085W BRP1P53194 125 aa6.37□□□□□ -1.39
NDE2YDL085W YDR215CQ12240 137 aa6.37□□□□□ -1.39
NDE2YDL085W SPO24Q3E752 67 aa6.37□□□□□ -1.39
NDE2YDL085W YOR304C-AO14468 76 aa6.36□□□□□ -1.39
NDE2YDL085W MDM10P18409 493 aa6.36□□□□□ -1.39
NDE2YDL085W MRPL20P22354 195 aaPredicted RBP6.36□□□□□ -1.39
NDE2YDL085W YPT53P36019 220 aa6.36□□□□□ -1.39
NDE2YDL085W YNL200CP40165 246 aaKnown RBP6.36□□□□□ -1.39
NDE2YDL085W HUA1P40325 198 aa6.36□□□□□ -1.39
NDE2YDL085W YFR045WP43617 309 aa6.36□□□□□ -1.39
NDE2YDL085W GRH1Q04410 372 aaKnown RBP6.36□□□□□ -1.39
NDE2YDL085W YER188WP40103 239 aa6.36□□□□□ -1.39
NDE2YDL085W UPS3Q04006 179 aa6.36□□□□□ -1.39
NDE2YDL085W DPP1Q05521 289 aa6.36□□□□□ -1.39
NDE2YDL085W AYT1Q12226 474 aa6.36□□□□□ -1.39
NDE2YDL085W JID1Q12350 301 aa6.36□□□□□ -1.39
NDE2YDL085W YPR170W-BP0C5R9 85 aa6.35□□□□□ -1.39
NDE2YDL085W MRP49P32388 137 aa6.35□□□□□ -1.39
NDE2YDL085W YKR045CP36138 183 aa6.35□□□□□ -1.39
NDE2YDL085W POP3P53833 195 aaPredicted RBP6.35□□□□□ -1.39
NDE2YDL085W DIA1P54005 336 aa6.35□□□□□ -1.39
NDE2YDL085W ATG39Q06159 398 aa6.35□□□□□ -1.39
NDE2YDL085W HTL1Q9URQ5 78 aa6.35□□□□□ -1.39
NDE2YDL085W TIR2P33890 251 aa6.34□□□□□ -1.39
NDE2YDL085W RPF1P38805 295 aaKnown RBP6.34□□□□□ -1.39
NDE2YDL085W YPI1P43587 155 aa6.34□□□□□ -1.39
NDE2YDL085W RXT3Q07458 294 aa6.34□□□□□ -1.39
NDE2YDL085W DAD1Q12248 94 aa6.34□□□□□ -1.39
NDE2YDL085W ATO3Q12359 275 aa6.34□□□□□ -1.39
NDE2YDL085W SLO1Q3E784 85 aa6.34□□□□□ -1.39
NDE2YDL085W SCS22Q6Q595 175 aa6.34□□□□□ -1.39
NDE2YDL085W GPP2P40106 250 aaKnown RBP6.33□□□□□ -1.4
NDE2YDL085W DAD4P69851 72 aa6.33□□□□□ -1.4
NDE2YDL085W GTO3Q04806 366 aa6.33□□□□□ -1.4
NDE2YDL085W TIM18Q08749 192 aa6.33□□□□□ -1.4
NDE2YDL085W RDL1Q12305 139 aaKnown RBP6.33□□□□□ -1.4
NDE2YDL085W ARO2P28777 376 aaKnown RBP6.32□□□□□ -1.4
NDE2YDL085W YPS1P32329 569 aa6.32□□□□□ -1.4
NDE2YDL085W YJL213WP40896 331 aa6.32□□□□□ -1.4
NDE2YDL085W SWT21P53873 357 aaPredicted RBP6.32□□□□□ -1.4
NDE2YDL085W TIM10P87108 93 aa6.32□□□□□ -1.4
NDE2YDL085W YML079WQ03629 201 aa6.32□□□□□ -1.4
NDE2YDL085W UTP23Q12339 254 aaKnown RBP6.32□□□□□ -1.4
NDE2YDL085W YLR363W-AQ3E747 85 aa6.32□□□□□ -1.4
NDE2YDL085W IRA2P19158 3079 aa6.32□□□□□ -1.4
NDE2YDL085W RPL12AP0CX53 165 aaKnown RBP6.32□□□□□ -1.4
NDE2YDL085W RPL12BP0CX54 165 aa6.32□□□□□ -1.4
NDE2YDL085W SPS100P13130 326 aa6.32□□□□□ -1.4
NDE2YDL085W MRPL38P35996 138 aaPredicted RBP6.32□□□□□ -1.4
NDE2YDL085W YKR070WP36151 352 aaKnown RBP6.32□□□□□ -1.4
NDE2YDL085W SUT1P53032 299 aaKnown RBP6.32□□□□□ -1.4
NDE2YDL085W YNL184CP53876 108 aa6.32□□□□□ -1.4
NDE2YDL085W VPS71Q03433 280 aa6.32□□□□□ -1.4
NDE2YDL085W BET5Q03630 159 aa6.32□□□□□ -1.4
NDE2YDL085W YHR213WP0CI67 198 aa6.31□□□□□ -1.4
NDE2YDL085W PRY2P36110 329 aa6.31□□□□□ -1.4
NDE2YDL085W NCA3P46955 337 aa6.31□□□□□ -1.4
NDE2YDL085W UBC7Q02159 165 aa6.31□□□□□ -1.4
NDE2YDL085W IRA1P18963 3092 aa6.3□□□□□ -1.4
NDE2YDL085W MBF1O14467 151 aaKnown RBP6.3□□□□□ -1.4
NDE2YDL085W YNL234WP53857 426 aa6.3□□□□□ -1.4
NDE2YDL085W SAL1D6W196 494 aa6.29□□□□□ -1.4
NDE2YDL085W MBB1P39534 108 aa6.29□□□□□ -1.4
NDE2YDL085W YIR020CP40575 100 aa6.29□□□□□ -1.4
NDE2YDL085W VTS1Q08831 523 aaKnown RBP RIP-Chip data6.29□□□□□ -1.4not detected
NDE2YDL085W ERS1P17261 260 aa6.28□□□□□ -1.4
NDE2YDL085W YMR141CP40211 102 aa6.28□□□□□ -1.4
NDE2YDL085W IMP2P46972 177 aa6.28□□□□□ -1.4
NDE2YDL085W YLR342W-AQ3E810 57 aa6.28□□□□□ -1.4
NDE2YDL085W CPT1P17898 393 aa6.28□□□□□ -1.4
NDE2YDL085W APS1P35181 156 aa6.28□□□□□ -1.4
NDE2YDL085W POR2P40478 281 aa6.28□□□□□ -1.4
NDE2YDL085W CAB4P53332 305 aa6.28□□□□□ -1.4
NDE2YDL085W FCY1Q12178 158 aa6.28□□□□□ -1.4
NDE2YDL085W CYC7P00045 113 aa6.27□□□□□ -1.41
NDE2YDL085W RPL27AP0C2H6 136 aaKnown RBP6.27□□□□□ -1.41
NDE2YDL085W ANB1P19211 157 aa6.27□□□□□ -1.41
NDE2YDL085W RPL27BP0C2H7 136 aaKnown RBP6.26□□□□□ -1.41
NDE2YDL085W YKL044WP36092 106 aa6.26□□□□□ -1.41
NDE2YDL085W YJL027CP47063 138 aaPredicted RBP6.26□□□□□ -1.41
NDE2YDL085W GPI19Q04082 140 aa6.26□□□□□ -1.41
NDE2YDL085W PBP4Q07362 185 aaKnown RBP6.26□□□□□ -1.41
NDE2YDL085W SNU13P39990 126 aaKnown RBP6.25□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 31 ms