RNA–Protein interactions for RNA: YCR096C

HMRA2, Transcript of Silenced copy of a2 at HMR, yeast

Gene HMRA2, Length 360 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HMRA2	YCR096C	FIG1	P38224	298 aa		-0.48	□□□□□ -2.49
HMRA2	YCR096C	VMA10	P48836	114 aa	Known RBP	-0.48	□□□□□ -2.49
HMRA2	YCR096C	BRP1	P53194	125 aa		-0.49	□□□□□ -2.49
HMRA2	YCR096C	YPL067C	Q02754	198 aa		-0.49	□□□□□ -2.49
HMRA2	YCR096C	YLR053C	Q12026	108 aa		-0.49	□□□□□ -2.49
HMRA2	YCR096C	SFT2	P38166	215 aa		-0.5	□□□□□ -2.49
HMRA2	YCR096C	YDR476C	Q03362	224 aa		-0.5	□□□□□ -2.49
HMRA2	YCR096C	MAK3	Q03503	176 aa		-0.5	□□□□□ -2.49
HMRA2	YCR096C	GIM5	Q04493	163 aa		-0.5	□□□□□ -2.49
HMRA2	YCR096C	YPD1	Q07688	167 aa		-0.5	□□□□□ -2.49
HMRA2	YCR096C	YOR385W	Q08909	290 aa		-0.5	□□□□□ -2.49
HMRA2	YCR096C	DDP1	Q99321	188 aa	Known RBP	-0.5	□□□□□ -2.49
HMRA2	YCR096C	HSP12	P22943	109 aa	Known RBP	-0.51	□□□□□ -2.49
HMRA2	YCR096C	BUB2	P26448	306 aa	Predicted RBP	-0.51	□□□□□ -2.49
HMRA2	YCR096C	YGR201C	P42936	225 aa		-0.51	□□□□□ -2.49
HMRA2	YCR096C	SNT2	P53127	1403 aa		-0.51	□□□□□ -2.49
HMRA2	YCR096C	YLR296W	Q05898	108 aa		-0.51	□□□□□ -2.49
HMRA2	YCR096C	YOL164W-A	Q3E7A5	60 aa		-0.51	□□□□□ -2.49
HMRA2	YCR096C	MRPL11	P36521	249 aa	Predicted RBP	-0.52	□□□□□ -2.49
HMRA2	YCR096C	LCL1	Q02786	101 aa		-0.52	□□□□□ -2.49
HMRA2	YCR096C	NAT5	Q08689	176 aa		-0.52	□□□□□ -2.49
HMRA2	YCR096C	YDR010C	Q12426	110 aa		-0.52	□□□□□ -2.49
HMRA2	YCR096C	SEC7	P11075	2009 aa	Known RBP	-0.53	□□□□□ -2.49
HMRA2	YCR096C	PFY1	P07274	126 aa		-0.53	□□□□□ -2.49
HMRA2	YCR096C	SRX1	P36077	127 aa		-0.53	□□□□□ -2.49
HMRA2	YCR096C	YGL149W	P53116	101 aa		-0.53	□□□□□ -2.49
HMRA2	YCR096C	COF1	Q03048	143 aa	Known RBP	-0.53	□□□□□ -2.49
HMRA2	YCR096C	ATG38	Q05789	226 aa	Known RBP	-0.53	□□□□□ -2.49
HMRA2	YCR096C	RAF1	Q06891	181 aa		-0.53	□□□□□ -2.49
HMRA2	YCR096C	GTT2	Q12390	233 aa		-0.53	□□□□□ -2.49
HMRA2	YCR096C	URB1	P34241	1764 aa	Known RBP	-0.54	□□□□□ -2.5
HMRA2	YCR096C	EMP24	P32803	203 aa	Known RBP	-0.54	□□□□□ -2.5
HMRA2	YCR096C	AIM18	P38884	321 aa		-0.54	□□□□□ -2.5
HMRA2	YCR096C	LSM1	P47017	172 aa	Known RBP	-0.54	□□□□□ -2.5
HMRA2	YCR096C	EFG1	Q3E705	233 aa	Known RBP	-0.54	□□□□□ -2.5
HMRA2	YCR096C	RPS28B	P0C0X0	67 aa	Known RBP	-0.55	□□□□□ -2.5
HMRA2	YCR096C	PBI2	P0CT04	75 aa	Known RBP	-0.55	□□□□□ -2.5
HMRA2	YCR096C	SUA7	P29055	345 aa	Predicted RBP	-0.55	□□□□□ -2.5
HMRA2	YCR096C	YIL163C	P40448	117 aa		-0.55	□□□□□ -2.5
HMRA2	YCR096C	RPS28A	Q3E7X9	67 aa	Predicted RBP	-0.55	□□□□□ -2.5
HMRA2	YCR096C	RPS1A	P33442	255 aa	Known RBP	-0.56	□□□□□ -2.5
HMRA2	YCR096C	DER1	P38307	211 aa		-0.56	□□□□□ -2.5
HMRA2	YCR096C	YEA6	P39953	335 aa		-0.56	□□□□□ -2.5
HMRA2	YCR096C	YGR017W	P53210	297 aa		-0.56	□□□□□ -2.5
HMRA2	YCR096C	NSL1	Q12143	216 aa		-0.56	□□□□□ -2.5
HMRA2	YCR096C	CHD1	P32657	1468 aa		-0.56	□□□□□ -2.5
HMRA2	YCR096C	QCR2	P07257	368 aa		-0.57	□□□□□ -2.5
HMRA2	YCR096C	VPS51	P36116	164 aa		-0.57	□□□□□ -2.5
HMRA2	YCR096C	QCR10	P37299	77 aa		-0.57	□□□□□ -2.5
HMRA2	YCR096C	AME1	P38313	324 aa		-0.57	□□□□□ -2.5
HMRA2	YCR096C	PET20	Q99373	253 aa		-0.57	□□□□□ -2.5
HMRA2	YCR096C	TY4B-H	P0C2J7	1802 aa		-0.57	□□□□□ -2.5
HMRA2	YCR096C	GSP1	P32835	219 aa	Known RBP	-0.58	□□□□□ -2.5
HMRA2	YCR096C	SUI1	P32911	108 aa	Known RBP	-0.58	□□□□□ -2.5
HMRA2	YCR096C	ARL3	Q02804	198 aa		-0.58	□□□□□ -2.5
HMRA2	YCR096C	MRPL44	P19956	98 aa		-0.59	□□□□□ -2.5
HMRA2	YCR096C	LSM8	P47093	109 aa	Known RBP	-0.59	□□□□□ -2.5
HMRA2	YCR096C	HHO1	P53551	258 aa		-0.59	□□□□□ -2.5
HMRA2	YCR096C	LDB18	Q07887	179 aa		-0.59	□□□□□ -2.5
HMRA2	YCR096C	FCF2	Q12035	217 aa	Predicted RBP	-0.59	□□□□□ -2.5
HMRA2	YCR096C	ATP14	Q12349	124 aa		-0.59	□□□□□ -2.5
HMRA2	YCR096C	YGR240C-A	Q3E786	66 aa		-0.59	□□□□□ -2.5
HMRA2	YCR096C	CMC2	Q3E7A4	109 aa		-0.59	□□□□□ -2.5
HMRA2	YCR096C	MED11	Q99278	115 aa		-0.59	□□□□□ -2.5
HMRA2	YCR096C	RPA12	P32529	125 aa	Known RBP	-0.6	□□□□□ -2.51
HMRA2	YCR096C	ENV10	Q99382	181 aa		-0.6	□□□□□ -2.51
HMRA2	YCR096C	YRF1-6	P53819	1859 aa		-0.61	□□□□□ -2.51
HMRA2	YCR096C	PAU21	P0CE86	164 aa		-0.61	□□□□□ -2.51
HMRA2	YCR096C	PAU22	P0CE87	164 aa		-0.61	□□□□□ -2.51
HMRA2	YCR096C	HAP3	P13434	144 aa		-0.61	□□□□□ -2.51
HMRA2	YCR096C	PRS3	P38689	320 aa	Known RBP	-0.61	□□□□□ -2.51
HMRA2	YCR096C	YAL064W	P39711	94 aa		-0.61	□□□□□ -2.51
HMRA2	YCR096C	SDH7	Q04401	133 aa		-0.61	□□□□□ -2.51
HMRA2	YCR096C	YMR320W	Q04897	101 aa		-0.61	□□□□□ -2.51
HMRA2	YCR096C	OCA6	Q12454	224 aa		-0.61	□□□□□ -2.51
HMRA2	YCR096C	YCR050C	P25630	102 aa		-0.62	□□□□□ -2.51
HMRA2	YCR096C	TRS20	P38334	175 aa		-0.62	□□□□□ -2.51
HMRA2	YCR096C	ICS3	P47034	131 aa		-0.62	□□□□□ -2.51
HMRA2	YCR096C	EFM5	P53200	248 aa	Known RBP	-0.62	□□□□□ -2.51
HMRA2	YCR096C	YNL190W	P53872	204 aa		-0.62	□□□□□ -2.51
HMRA2	YCR096C	YHR173C	P38864	112 aa		-0.63	□□□□□ -2.51
HMRA2	YCR096C	SPG1	P50088	95 aa		-0.63	□□□□□ -2.51
HMRA2	YCR096C	HSP10	P38910	106 aa		-0.64	□□□□□ -2.51
HMRA2	YCR096C	HPM1	P40481	377 aa		-0.64	□□□□□ -2.51
HMRA2	YCR096C	MRPS12	P53732	153 aa		-0.64	□□□□□ -2.51
HMRA2	YCR096C	RAV2	Q03956	351 aa		-0.65	□□□□□ -2.51
HMRA2	YCR096C	SPC3	Q12133	184 aa		-0.65	□□□□□ -2.51
HMRA2	YCR096C	YOR1	P53049	1477 aa		-0.66	□□□□□ -2.51
HMRA2	YCR096C	RPL36B	O14455	100 aa	Known RBP	-0.66	□□□□□ -2.52
HMRA2	YCR096C	RPL36A	P05745	100 aa	Predicted RBP	-0.66	□□□□□ -2.52
HMRA2	YCR096C	RPL22A	P05749	121 aa	Known RBP	-0.66	□□□□□ -2.52
HMRA2	YCR096C	YAP3	P38749	330 aa		-0.66	□□□□□ -2.52
HMRA2	YCR096C	HPA2	Q06592	156 aa		-0.66	□□□□□ -2.52
HMRA2	YCR096C	YBR072C-A	Q3E794	53 aa		-0.66	□□□□□ -2.52
HMRA2	YCR096C	TRM732	Q03496	1420 aa		-0.66	□□□□□ -2.52
HMRA2	YCR096C	CCW14	O13547	238 aa		-0.67	□□□□□ -2.52
HMRA2	YCR096C	RPL14A	P36105	138 aa	Known RBP	-0.67	□□□□□ -2.52
HMRA2	YCR096C	RPL14B	P38754	138 aa	Known RBP	-0.67	□□□□□ -2.52
HMRA2	YCR096C	YLR255C	O13574	117 aa		-0.68	□□□□□ -2.52
HMRA2	YCR096C	PET54	P10834	293 aa		-0.68	□□□□□ -2.52

Retrieved 100 of 5,963 RNA–protein pairs in 44.7 ms