RNA–Protein interactions for RNA: YCR084C

TUP1, Transcript of General repressor of transcription, yeast

Gene TUP1, Length 2,142 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TUP1	YCR084C	TAD3	Q9URQ3	322 aa		4.23	□□□□□ -1.73
TUP1	YCR084C	YER181C	P40097	107 aa		4.22	□□□□□ -1.73
TUP1	YCR084C	SCW4	P53334	386 aa	Known RBP	4.22	□□□□□ -1.73
TUP1	YCR084C	YPL039W	Q03080	316 aa		4.22	□□□□□ -1.73
TUP1	YCR084C	PIR3	Q03180	325 aa		4.22	□□□□□ -1.73
TUP1	YCR084C	YMR082C	Q04276	118 aa		4.22	□□□□□ -1.73
TUP1	YCR084C	SPG4	Q04438	115 aa		4.22	□□□□□ -1.73
TUP1	YCR084C	YLR363W-A	Q3E747	85 aa		4.22	□□□□□ -1.73
TUP1	YCR084C	YOR376W-A	Q3E805	51 aa		4.22	□□□□□ -1.73
TUP1	YCR084C	CCH1	P50077	2039 aa		4.22	□□□□□ -1.73
TUP1	YCR084C	RPL16B	P26785	198 aa	Known RBP	4.22	□□□□□ -1.73
TUP1	YCR084C	ANS1	P38832	159 aa		4.22	□□□□□ -1.73
TUP1	YCR084C	TIM17	P39515	158 aa		4.22	□□□□□ -1.73
TUP1	YCR084C	YJL213W	P40896	331 aa		4.22	□□□□□ -1.73
TUP1	YCR084C	YNL046W	P53956	172 aa		4.22	□□□□□ -1.73
TUP1	YCR084C	NNK1	P36003	928 aa		4.21	□□□□□ -1.74
TUP1	YCR084C	PAM17	P36147	197 aa		4.21	□□□□□ -1.74
TUP1	YCR084C	MSL1	P40567	111 aa	Predicted RBP	4.21	□□□□□ -1.74
TUP1	YCR084C	WWM1	P43582	211 aa	Known RBP	4.21	□□□□□ -1.74
TUP1	YCR084C	YJL028W	P47062	111 aa		4.21	□□□□□ -1.74
TUP1	YCR084C	NPC2	Q12408	173 aa		4.21	□□□□□ -1.74
TUP1	YCR084C	YHR214C-E	Q8TGK0	99 aa		4.21	□□□□□ -1.74
TUP1	YCR084C	Q0255	P03881	472 aa		4.21	□□□□□ -1.74
TUP1	YCR084C	RAD6	P06104	172 aa		4.21	□□□□□ -1.74
TUP1	YCR084C	GPI2	P46961	280 aa		4.21	□□□□□ -1.74
TUP1	YCR084C	TDA7	P53882	636 aa	Predicted RBP	4.21	□□□□□ -1.74
TUP1	YCR084C	RPL21A	Q02753	160 aa	Known RBP	4.21	□□□□□ -1.74
TUP1	YCR084C	YML079W	Q03629	201 aa		4.21	□□□□□ -1.74
TUP1	YCR084C	PRM3	Q08931	133 aa		4.21	□□□□□ -1.74
TUP1	YCR084C	RPL21B	Q12672	160 aa	Known RBP	4.21	□□□□□ -1.74
TUP1	YCR084C	YER175W-A	Q8TGU4	54 aa		4.21	□□□□□ -1.74
TUP1	YCR084C	YNL198C	P40166	100 aa		4.2	□□□□□ -1.74
TUP1	YCR084C	YIA6	P40556	373 aa		4.2	□□□□□ -1.74
TUP1	YCR084C	YNL234W	P53857	426 aa		4.2	□□□□□ -1.74
TUP1	YCR084C	SCS22	Q6Q595	175 aa		4.2	□□□□□ -1.74
TUP1	YCR084C	ECM12	O13529	151 aa		4.19	□□□□□ -1.74
TUP1	YCR084C	SEC11	P15367	167 aa		4.19	□□□□□ -1.74
TUP1	YCR084C	AGA2	P32781	87 aa		4.19	□□□□□ -1.74
TUP1	YCR084C	YGL034C	P53186	121 aa		4.19	□□□□□ -1.74
TUP1	YCR084C	YGR050C	P53231	118 aa		4.19	□□□□□ -1.74
TUP1	YCR084C	YMR090W	Q04304	227 aa	Known RBP	4.19	□□□□□ -1.74
TUP1	YCR084C	COA2	Q3E823	68 aa		4.19	□□□□□ -1.74
TUP1	YCR084C	YAL064W-B	O13512	126 aa		4.19	□□□□□ -1.74
TUP1	YCR084C	LDB16	P25587	256 aa		4.19	□□□□□ -1.74
TUP1	YCR084C	YHR138C	P38841	114 aa	Predicted RBP	4.19	□□□□□ -1.74
TUP1	YCR084C	KNH1	P50112	268 aa		4.19	□□□□□ -1.74
TUP1	YCR084C	CSR2	Q12734	1121 aa		4.19	□□□□□ -1.74
TUP1	YCR084C	TSC3	Q3E790	80 aa		4.19	□□□□□ -1.74
TUP1	YCR084C	YCR025C	P25352	136 aa		4.18	□□□□□ -1.74
TUP1	YCR084C	YND1	P40009	630 aa		4.18	□□□□□ -1.74
TUP1	YCR084C	GAT4	P40569	121 aa		4.18	□□□□□ -1.74
TUP1	YCR084C	GPI19	Q04082	140 aa		4.18	□□□□□ -1.74
TUP1	YCR084C	YLR281C	Q05863	155 aa		4.18	□□□□□ -1.74
TUP1	YCR084C	YOR105W	Q08504	108 aa		4.18	□□□□□ -1.74
TUP1	YCR084C	YDL211C	Q12121	372 aa		4.18	□□□□□ -1.74
TUP1	YCR084C	KSH1	Q8TGJ3	72 aa		4.18	□□□□□ -1.74
TUP1	YCR084C	MSB2	P32334	1306 aa		4.18	□□□□□ -1.74
TUP1	YCR084C	RPS13	P05756	151 aa	Known RBP	4.18	□□□□□ -1.74
TUP1	YCR084C	AHT1	P29589	182 aa		4.18	□□□□□ -1.74
TUP1	YCR084C	GGC1	P38988	300 aa		4.18	□□□□□ -1.74
TUP1	YCR084C	CYB5	P40312	120 aa		4.18	□□□□□ -1.74
TUP1	YCR084C	OST1	P41543	476 aa	Known RBP	4.18	□□□□□ -1.74
TUP1	YCR084C	YGL088W	P53151	121 aa		4.18	□□□□□ -1.74
TUP1	YCR084C	ATO3	Q12359	275 aa		4.18	□□□□□ -1.74
TUP1	YCR084C	TRP1	P00912	224 aa		4.17	□□□□□ -1.74
TUP1	YCR084C	YPT10	P38146	199 aa		4.17	□□□□□ -1.74
TUP1	YCR084C	FYV4	P38783	130 aa	Predicted RBP	4.17	□□□□□ -1.74
TUP1	YCR084C	YNL200C	P40165	246 aa	Known RBP	4.17	□□□□□ -1.74
TUP1	YCR084C	YIL169C	P40442	995 aa		4.17	□□□□□ -1.74
TUP1	YCR084C	YOR186W	Q08560	144 aa		4.17	□□□□□ -1.74
TUP1	YCR084C	TIM18	Q08749	192 aa		4.17	□□□□□ -1.74
TUP1	YCR084C	YIL102C-A	Q2V2P5	75 aa		4.17	□□□□□ -1.74
TUP1	YCR084C	TIM12	P32830	109 aa		4.16	□□□□□ -1.74
TUP1	YCR084C	GPX1	P36014	167 aa		4.16	□□□□□ -1.74
TUP1	YCR084C	YNR064C	P53750	290 aa		4.16	□□□□□ -1.74
TUP1	YCR084C	PIR1	Q03178	341 aa		4.16	□□□□□ -1.74
TUP1	YCR084C	RAF1	Q06891	181 aa		4.16	□□□□□ -1.74
TUP1	YCR084C	SMT3	Q12306	101 aa	Known RBP	4.16	□□□□□ -1.74
TUP1	YCR084C	YCR024C-B	Q3E7Z8	88 aa		4.16	□□□□□ -1.74
TUP1	YCR084C	RPS22A	P0C0W1	130 aa	Known RBP	4.16	□□□□□ -1.74
TUP1	YCR084C	MDH2	P22133	377 aa		4.16	□□□□□ -1.74
TUP1	YCR084C	SMP1	P38128	452 aa		4.16	□□□□□ -1.74
TUP1	YCR084C	OM14	P38325	134 aa		4.16	□□□□□ -1.74
TUP1	YCR084C	ATX1	P38636	73 aa		4.16	□□□□□ -1.74
TUP1	YCR084C	ROT1	Q03691	256 aa		4.16	□□□□□ -1.74
TUP1	YCR084C	RIM9	Q04734	239 aa		4.16	□□□□□ -1.74
TUP1	YCR084C	JID1	Q12350	301 aa		4.16	□□□□□ -1.74
TUP1	YCR084C	RPS22B	Q3E7Y3	130 aa	Known RBP	4.16	□□□□□ -1.74
TUP1	YCR084C	RPP1	P38786	293 aa		4.15	□□□□□ -1.74
TUP1	YCR084C	MIC27	P50945	234 aa		4.15	□□□□□ -1.74
TUP1	YCR084C	PET8	P38921	284 aa		4.15	□□□□□ -1.75
TUP1	YCR084C	DSK2	P48510	373 aa		4.15	□□□□□ -1.75
TUP1	YCR084C	SMD1	Q02260	146 aa	Predicted RBP	4.15	□□□□□ -1.75
TUP1	YCR084C	NAG1	Q8TGN9	163 aa		4.15	□□□□□ -1.75
TUP1	YCR084C	SPS100	P13130	326 aa		4.14	□□□□□ -1.75
TUP1	YCR084C	ERG2	P32352	222 aa		4.14	□□□□□ -1.75
TUP1	YCR084C	CUZ1	P53899	274 aa		4.14	□□□□□ -1.75
TUP1	YCR084C	POC4	Q12245	148 aa	Predicted RBP	4.14	□□□□□ -1.75
TUP1	YCR084C	SUT2	Q12286	268 aa		4.14	□□□□□ -1.75
TUP1	YCR084C	SOD1	P00445	154 aa	Known RBP	4.13	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 27.7 ms