RNA–Protein interactions for RNA: YBR263W

SHM1, Transcript of Mitochondrial serine hydroxymethyltransferase, yeastyeast

Gene SHM1, Length 1,473 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM1YBR263W RPS2P25443 254 aaKnown RBP4.31□□□□□ -1.72
SHM1YBR263W POF1P25576 258 aa4.31□□□□□ -1.72
SHM1YBR263W TIR2P33890 251 aa4.31□□□□□ -1.72
SHM1YBR263W SNF11P38956 169 aa4.31□□□□□ -1.72
SHM1YBR263W MST28P39552 234 aa4.31□□□□□ -1.72
SHM1YBR263W LCB3P47013 409 aa4.31□□□□□ -1.72
SHM1YBR263W YGL185CP53100 379 aa4.31□□□□□ -1.72
SHM1YBR263W MST27P53176 234 aa4.31□□□□□ -1.72
SHM1YBR263W HHO1P53551 258 aa4.31□□□□□ -1.72
SHM1YBR263W YPL257WQ08974 193 aa4.31□□□□□ -1.72
SHM1YBR263W ERV2Q12284 196 aa4.31□□□□□ -1.72
SHM1YBR263W DIF1O13577 133 aa4.3□□□□□ -1.72
SHM1YBR263W ADH2P00331 348 aaKnown RBP4.3□□□□□ -1.72
SHM1YBR263W PAU1P0CE88 120 aa4.3□□□□□ -1.72
SHM1YBR263W PAU14P0CE89 120 aa4.3□□□□□ -1.72
SHM1YBR263W PAU6P0CE90 120 aa4.3□□□□□ -1.72
SHM1YBR263W PAU18P0CE91 120 aa4.3□□□□□ -1.72
SHM1YBR263W PAU8P0CE92 120 aa4.3□□□□□ -1.72
SHM1YBR263W PAU11P0CE93 120 aa4.3□□□□□ -1.72
SHM1YBR263W PAU13P38725 120 aa4.3□□□□□ -1.72
SHM1YBR263W YJR096WP47137 282 aa4.3□□□□□ -1.72
SHM1YBR263W MCM22P47167 239 aa4.3□□□□□ -1.72
SHM1YBR263W YGR025WP53216 100 aa4.3□□□□□ -1.72
SHM1YBR263W UBC7Q02159 165 aa4.3□□□□□ -1.72
SHM1YBR263W PAU10Q03050 120 aa4.3□□□□□ -1.72
SHM1YBR263W PAU20Q08322 120 aa4.3□□□□□ -1.72
SHM1YBR263W FIT2Q08906 153 aa4.3□□□□□ -1.72
SHM1YBR263W TPT1Q12272 230 aaKnown RBP4.3□□□□□ -1.72
SHM1YBR263W PAU9Q3E770 120 aa4.3□□□□□ -1.72
SHM1YBR263W Q0142Q9ZZW4 58 aa4.3□□□□□ -1.72
SHM1YBR263W HSP12P22943 109 aaKnown RBP4.3□□□□□ -1.72
SHM1YBR263W ECM33P38248 429 aaKnown RBP4.3□□□□□ -1.72
SHM1YBR263W MPC2P38857 129 aa4.3□□□□□ -1.72
SHM1YBR263W SIM1P40472 476 aa4.3□□□□□ -1.72
SHM1YBR263W GPI2P46961 280 aa4.3□□□□□ -1.72
SHM1YBR263W MOG1P47123 218 aa4.3□□□□□ -1.72
SHM1YBR263W TDA4P47153 279 aa4.3□□□□□ -1.72
SHM1YBR263W MRX11Q03079 207 aa4.3□□□□□ -1.72
SHM1YBR263W YOL160WQ08321 113 aa4.3□□□□□ -1.72
SHM1YBR263W RPL31AP0C2H8 113 aaKnown RBP4.29□□□□□ -1.72
SHM1YBR263W RPL31BP0C2H9 113 aaKnown RBP4.29□□□□□ -1.72
SHM1YBR263W YBR121C-AP0C5L4 52 aa4.29□□□□□ -1.72
SHM1YBR263W LDS1P31379 325 aa4.29□□□□□ -1.72
SHM1YBR263W SRB6P32570 121 aa4.29□□□□□ -1.72
SHM1YBR263W CMC1P36064 111 aa4.29□□□□□ -1.72
SHM1YBR263W RPF1P38805 295 aaKnown RBP4.29□□□□□ -1.72
SHM1YBR263W PGD1P40356 397 aa4.29□□□□□ -1.72
SHM1YBR263W IZH1Q03419 316 aa4.29□□□□□ -1.72
SHM1YBR263W RRG8Q06109 277 aa4.29□□□□□ -1.72
SHM1YBR263W LOA1Q06508 300 aa4.29□□□□□ -1.72
SHM1YBR263W MBB1P39534 108 aa4.28□□□□□ -1.72
SHM1YBR263W ERG28P40030 148 aa4.28□□□□□ -1.72
SHM1YBR263W HUA1P40325 198 aa4.28□□□□□ -1.72
SHM1YBR263W GRH1Q04410 372 aaKnown RBP4.28□□□□□ -1.72
SHM1YBR263W DPP1Q05521 289 aa4.28□□□□□ -1.72
SHM1YBR263W YOR011W-AQ3E807 68 aa4.28□□□□□ -1.72
SHM1YBR263W MDN1Q12019 4910 aaKnown RBP4.28□□□□□ -1.72
SHM1YBR263W COX2P00410 251 aa4.27□□□□□ -1.73
SHM1YBR263W MRS1P07266 363 aa4.27□□□□□ -1.73
SHM1YBR263W CPR1P14832 162 aaKnown RBP4.27□□□□□ -1.73
SHM1YBR263W CUP2P15315 225 aa4.27□□□□□ -1.73
SHM1YBR263W UGX2P32772 223 aa4.27□□□□□ -1.73
SHM1YBR263W PHD1P36093 366 aa4.27□□□□□ -1.73
SHM1YBR263W YHR173CP38864 112 aa4.27□□□□□ -1.73
SHM1YBR263W YIL024CP40543 189 aa4.27□□□□□ -1.73
SHM1YBR263W COX18P53239 316 aa4.27□□□□□ -1.73
SHM1YBR263W TOM7P53507 60 aa4.27□□□□□ -1.73
SHM1YBR263W YDR274CP87283 123 aa4.27□□□□□ -1.73
SHM1YBR263W RAV2Q03956 351 aa4.27□□□□□ -1.73
SHM1YBR263W IZH3Q07959 543 aa4.27□□□□□ -1.73
SHM1YBR263W PRM7Q12459 698 aa4.27□□□□□ -1.73
SHM1YBR263W COQ3P27680 312 aa4.26□□□□□ -1.73
SHM1YBR263W MRPL24P36525 258 aaPredicted RBP4.26□□□□□ -1.73
SHM1YBR263W YIL163CP40448 117 aa4.26□□□□□ -1.73
SHM1YBR263W NSE4P43124 402 aa4.26□□□□□ -1.73
SHM1YBR263W MIC26P50087 233 aa4.26□□□□□ -1.73
SHM1YBR263W YNL184CP53876 108 aa4.26□□□□□ -1.73
SHM1YBR263W TRI1Q05024 226 aa4.26□□□□□ -1.73
SHM1YBR263W ATG33Q06485 197 aa4.26□□□□□ -1.73
SHM1YBR263W FSF1Q12029 327 aaKnown RBP4.26□□□□□ -1.73
SHM1YBR263W YNL146C-AQ3E7Z1 64 aa4.26□□□□□ -1.73
SHM1YBR263W YPR014CQ6B0W2 109 aa4.26□□□□□ -1.73
SHM1YBR263W RPS22AP0C0W1 130 aaKnown RBP4.25□□□□□ -1.73
SHM1YBR263W RPB3P16370 318 aaKnown RBP4.25□□□□□ -1.73
SHM1YBR263W SDH4P37298 181 aa4.25□□□□□ -1.73
SHM1YBR263W PHS1P40857 217 aa4.25□□□□□ -1.73
SHM1YBR263W BNS1P50084 137 aa4.25□□□□□ -1.73
SHM1YBR263W ALG13P53178 202 aa4.25□□□□□ -1.73
SHM1YBR263W YBR126W-AQ8TGU7 68 aa4.25□□□□□ -1.73
SHM1YBR263W YLR302CO13544 120 aa4.24□□□□□ -1.73
SHM1YBR263W YCR023CP25351 611 aa4.24□□□□□ -1.73
SHM1YBR263W YBR013CP38215 129 aa4.24□□□□□ -1.73
SHM1YBR263W OXA1P39952 402 aa4.24□□□□□ -1.73
SHM1YBR263W PRE5P40302 234 aaKnown RBP4.24□□□□□ -1.73
SHM1YBR263W CYB5P40312 120 aa4.24□□□□□ -1.73
SHM1YBR263W CDC40P40968 455 aaPredicted RBP4.24□□□□□ -1.73
SHM1YBR263W AIM34Q03673 198 aa4.24□□□□□ -1.73
SHM1YBR263W PKR1Q03880 122 aaKnown RBP4.24□□□□□ -1.73
SHM1YBR263W YLR281CQ05863 155 aa4.24□□□□□ -1.73
SHM1YBR263W GEP3Q08622 556 aa4.24□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 26.2 ms