RNA–Protein interactions for RNA: YBR109C

CMD1, Transcript of Calmodulin, yeast

Gene CMD1, Length 444 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMD1	YBR109C	ACC1	Q00955	2233 aa	Known RBP	2.68	□□□□□ -1.98
CMD1	YBR109C	HTB2	P02294	131 aa		2.67	□□□□□ -1.98
CMD1	YBR109C	HEM4	P06174	275 aa		2.67	□□□□□ -1.98
CMD1	YBR109C	MRPL20	P22354	195 aa	Predicted RBP	2.67	□□□□□ -1.98
CMD1	YBR109C	PCL1	P24867	279 aa		2.67	□□□□□ -1.98
CMD1	YBR109C	QRI5	P32344	111 aa		2.67	□□□□□ -1.98
CMD1	YBR109C	MRP49	P32388	137 aa		2.67	□□□□□ -1.98
CMD1	YBR109C	AIM29	P36154	155 aa		2.67	□□□□□ -1.98
CMD1	YBR109C	YER084W	P40057	128 aa		2.67	□□□□□ -1.98
CMD1	YBR109C	CIN5	P40917	295 aa		2.67	□□□□□ -1.98
CMD1	YBR109C	CDC40	P40968	455 aa	Predicted RBP	2.67	□□□□□ -1.98
CMD1	YBR109C	YDR209C	Q03480	137 aa		2.67	□□□□□ -1.98
CMD1	YBR109C	UPS3	Q04006	179 aa		2.67	□□□□□ -1.98
CMD1	YBR109C	CSM4	Q08955	156 aa		2.67	□□□□□ -1.98
CMD1	YBR109C	YPL162C	Q12042	273 aa		2.67	□□□□□ -1.98
CMD1	YBR109C	WIP1	Q2V2P8	89 aa		2.67	□□□□□ -1.98
CMD1	YBR109C	YOR192C-C	Q3E736	78 aa		2.67	□□□□□ -1.98
CMD1	YBR109C	YOS1	Q3E834	85 aa		2.67	□□□□□ -1.98
CMD1	YBR109C	MRS1	P07266	363 aa		2.66	□□□□□ -1.98
CMD1	YBR109C	ZRT1	P32804	376 aa		2.66	□□□□□ -1.98
CMD1	YBR109C	POP7	P38291	140 aa		2.66	□□□□□ -1.98
CMD1	YBR109C	RPF1	P38805	295 aa	Known RBP	2.66	□□□□□ -1.98
CMD1	YBR109C	SRP14	P38985	146 aa		2.66	□□□□□ -1.98
CMD1	YBR109C	MIG3	P39943	394 aa		2.66	□□□□□ -1.98
CMD1	YBR109C	OXA1	P39952	402 aa		2.66	□□□□□ -1.98
CMD1	YBR109C	MSL1	P40567	111 aa	Predicted RBP	2.66	□□□□□ -1.98
CMD1	YBR109C	KEG1	P43614	200 aa		2.66	□□□□□ -1.98
CMD1	YBR109C	YJL118W	P47022	219 aa		2.66	□□□□□ -1.98
CMD1	YBR109C	TDA4	P47153	279 aa		2.66	□□□□□ -1.98
CMD1	YBR109C	DSK2	P48510	373 aa		2.66	□□□□□ -1.98
CMD1	YBR109C	CPD1	P53314	239 aa		2.66	□□□□□ -1.98
CMD1	YBR109C	NRM1	P53718	249 aa		2.66	□□□□□ -1.98
CMD1	YBR109C	DYN2	Q02647	92 aa		2.66	□□□□□ -1.98
CMD1	YBR109C	RPL21A	Q02753	160 aa	Known RBP	2.66	□□□□□ -1.98
CMD1	YBR109C	POC4	Q12245	148 aa	Predicted RBP	2.66	□□□□□ -1.98
CMD1	YBR109C	UTP23	Q12339	254 aa	Known RBP	2.66	□□□□□ -1.98
CMD1	YBR109C	GEP5	Q12393	293 aa		2.66	□□□□□ -1.98
CMD1	YBR109C	RPL21B	Q12672	160 aa	Known RBP	2.66	□□□□□ -1.98
CMD1	YBR109C	YIL046W-A	Q3E7Z4	54 aa		2.66	□□□□□ -1.98
CMD1	YBR109C	YIL002W-A	Q3E7Z5	69 aa		2.66	□□□□□ -1.98
CMD1	YBR109C	SEN1	Q00416	2231 aa	Known RBP	2.66	□□□□□ -1.98
CMD1	YBR109C	VPS13	Q07878	3144 aa		2.65	□□□□□ -1.98
CMD1	YBR109C	HTB1	P02293	131 aa	Known RBP	2.65	□□□□□ -1.99
CMD1	YBR109C	CUP2	P15315	225 aa		2.65	□□□□□ -1.99
CMD1	YBR109C	LDB16	P25587	256 aa		2.65	□□□□□ -1.99
CMD1	YBR109C	UTR5	P32630	166 aa		2.65	□□□□□ -1.99
CMD1	YBR109C	MRPS5	P33759	307 aa		2.65	□□□□□ -1.99
CMD1	YBR109C	SFT2	P38166	215 aa		2.65	□□□□□ -1.99
CMD1	YBR109C	RRT1	P38192	103 aa		2.65	□□□□□ -1.99
CMD1	YBR109C	CSH1	P38287	376 aa		2.65	□□□□□ -1.99
CMD1	YBR109C	DOG2	P38773	246 aa		2.65	□□□□□ -1.99
CMD1	YBR109C	GON7	P46984	123 aa		2.65	□□□□□ -1.99
CMD1	YBR109C	GRH1	Q04410	372 aa	Known RBP	2.65	□□□□□ -1.99
CMD1	YBR109C	ARC18	Q05933	178 aa	Known RBP	2.65	□□□□□ -1.99
CMD1	YBR109C	YOL118C	Q08259	102 aa		2.65	□□□□□ -1.99
CMD1	YBR109C	TMC1	Q08422	150 aa	Predicted RBP	2.65	□□□□□ -1.99
CMD1	YBR109C	DAD1	Q12248	94 aa		2.65	□□□□□ -1.99
CMD1	YBR109C	YLR363W-A	Q3E747	85 aa		2.65	□□□□□ -1.99
CMD1	YBR109C	YMR316C-A	I2HB70	103 aa		2.64	□□□□□ -1.99
CMD1	YBR109C	SEC4	P07560	215 aa	Known RBP	2.64	□□□□□ -1.99
CMD1	YBR109C	PRE1	P22141	198 aa	Known RBP	2.64	□□□□□ -1.99
CMD1	YBR109C	GSP1	P32835	219 aa	Known RBP	2.64	□□□□□ -1.99
CMD1	YBR109C	GSP2	P32836	220 aa	Known RBP	2.64	□□□□□ -1.99
CMD1	YBR109C	YIL163C	P40448	117 aa		2.64	□□□□□ -1.99
CMD1	YBR109C	YGL230C	P53074	147 aa		2.64	□□□□□ -1.99
CMD1	YBR109C	PKR1	Q03880	122 aa	Known RBP	2.64	□□□□□ -1.99
CMD1	YBR109C	GTO3	Q04806	366 aa		2.64	□□□□□ -1.99
CMD1	YBR109C	FIT2	Q08906	153 aa		2.64	□□□□□ -1.99
CMD1	YBR109C	YDL157C	Q12082	118 aa		2.64	□□□□□ -1.99
CMD1	YBR109C	PAI3	P01094	68 aa		2.63	□□□□□ -1.99
CMD1	YBR109C	STF1	P01098	86 aa		2.63	□□□□□ -1.99
CMD1	YBR109C	RPL27A	P0C2H6	136 aa	Known RBP	2.63	□□□□□ -1.99
CMD1	YBR109C	RPL27B	P0C2H7	136 aa	Known RBP	2.63	□□□□□ -1.99
CMD1	YBR109C	DDI2	P0CH63	225 aa		2.63	□□□□□ -1.99
CMD1	YBR109C	DDI3	P0CH64	225 aa		2.63	□□□□□ -1.99
CMD1	YBR109C	RPL23A	P0CX41	137 aa	Known RBP	2.63	□□□□□ -1.99
CMD1	YBR109C	RPL23B	P0CX42	137 aa	Known RBP	2.63	□□□□□ -1.99
CMD1	YBR109C	CPT1	P17898	393 aa		2.63	□□□□□ -1.99
CMD1	YBR109C	RPL16A	P26784	199 aa	Known RBP	2.63	□□□□□ -1.99
CMD1	YBR109C	YPS1	P32329	569 aa		2.63	□□□□□ -1.99
CMD1	YBR109C	APS1	P35181	156 aa		2.63	□□□□□ -1.99
CMD1	YBR109C	YKL044W	P36092	106 aa		2.63	□□□□□ -1.99
CMD1	YBR109C	PAM17	P36147	197 aa		2.63	□□□□□ -1.99
CMD1	YBR109C	YKR070W	P36151	352 aa	Known RBP	2.63	□□□□□ -1.99
CMD1	YBR109C	YBR220C	P38318	560 aa		2.63	□□□□□ -1.99
CMD1	YBR109C	YGP1	P38616	354 aa	Known RBP	2.63	□□□□□ -1.99
CMD1	YBR109C	BDH1	P39714	382 aa		2.63	□□□□□ -1.99
CMD1	YBR109C	YER134C	P40081	178 aa		2.63	□□□□□ -1.99
CMD1	YBR109C	YFR045W	P43617	309 aa		2.63	□□□□□ -1.99
CMD1	YBR109C	SDS23	P53172	527 aa		2.63	□□□□□ -1.99
CMD1	YBR109C	HST4	P53688	370 aa		2.63	□□□□□ -1.99
CMD1	YBR109C	YNL046W	P53956	172 aa		2.63	□□□□□ -1.99
CMD1	YBR109C	SUR7	P54003	302 aa		2.63	□□□□□ -1.99
CMD1	YBR109C	UBC7	Q02159	165 aa		2.63	□□□□□ -1.99
CMD1	YBR109C	RUB1	Q03919	77 aa		2.63	□□□□□ -1.99
CMD1	YBR109C	DPP1	Q05521	289 aa		2.63	□□□□□ -1.99
CMD1	YBR109C	YPL257W	Q08974	193 aa		2.63	□□□□□ -1.99
CMD1	YBR109C	SPO24	Q3E752	67 aa		2.63	□□□□□ -1.99
CMD1	YBR109C	HFA1	P32874	2273 aa		2.63	□□□□□ -1.99
CMD1	YBR109C	MRPL31	P14063	131 aa	Predicted RBP	2.62	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 28.5 ms