RNA–Protein interactions for RNA: YBR106W

PHO88, Transcript of Probable membrane protein, yeastyeast

Gene PHO88, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PHO88YBR106W MCP1Q12106 302 aa2.38□□□□□ -2.03
PHO88YBR106W ATO3Q12359 275 aa2.38□□□□□ -2.03
PHO88YBR106W DGK1Q12382 290 aa2.38□□□□□ -2.03
PHO88YBR106W OCA6Q12454 224 aa2.38□□□□□ -2.03
PHO88YBR106W CSF1Q12150 2958 aa2.38□□□□□ -2.03
PHO88YBR106W CPA1P07258 411 aaKnown RBP2.37□□□□□ -2.03
PHO88YBR106W SHB17P36136 271 aaKnown RBP2.37□□□□□ -2.03
PHO88YBR106W SRL3P36167 246 aa2.37□□□□□ -2.03
PHO88YBR106W YPT31P38555 223 aaKnown RBP2.37□□□□□ -2.03
PHO88YBR106W AVT2P39981 480 aa2.37□□□□□ -2.03
PHO88YBR106W SKI6P46948 246 aaPredicted RBP2.37□□□□□ -2.03
PHO88YBR106W GPI2P46961 280 aa2.37□□□□□ -2.03
PHO88YBR106W CIS3P47001 227 aa2.37□□□□□ -2.03
PHO88YBR106W TTI2P47168 421 aa2.37□□□□□ -2.03
PHO88YBR106W ERG25P53045 309 aa2.37□□□□□ -2.03
PHO88YBR106W YGL230CP53074 147 aa2.37□□□□□ -2.03
PHO88YBR106W SCP1Q08873 200 aa2.37□□□□□ -2.03
PHO88YBR106W POL2P21951 2222 aaKnown RBP2.37□□□□□ -2.03
PHO88YBR106W HFA1P32874 2273 aa2.37□□□□□ -2.03
PHO88YBR106W YGL041W-AP0C5N3 154 aa2.36□□□□□ -2.03
PHO88YBR106W RPL14AP36105 138 aaKnown RBP2.36□□□□□ -2.03
PHO88YBR106W PHO88P38264 188 aaPredicted RBP2.36□□□□□ -2.03
PHO88YBR106W ERV15P38312 142 aa2.36□□□□□ -2.03
PHO88YBR106W RPL14BP38754 138 aaKnown RBP2.36□□□□□ -2.03
PHO88YBR106W XPT1P47165 209 aa2.36□□□□□ -2.03
PHO88YBR106W GRX5Q02784 150 aa2.36□□□□□ -2.03
PHO88YBR106W YMR099CQ03161 297 aaKnown RBP2.36□□□□□ -2.03
PHO88YBR106W FYV12Q08559 129 aa2.36□□□□□ -2.03
PHO88YBR106W VPS68Q12016 184 aa2.36□□□□□ -2.03
PHO88YBR106W HUT1Q12520 339 aa2.36□□□□□ -2.03
PHO88YBR106W ATP5P09457 212 aa2.35□□□□□ -2.03
PHO88YBR106W PEX4P29340 183 aa2.35□□□□□ -2.03
PHO88YBR106W YRA2P36036 203 aaKnown RBP RIP-Chip data2.35□□□□□ -2.03not detected
PHO88YBR106W CTR2P38865 189 aa2.35□□□□□ -2.03
PHO88YBR106W SVP26P38869 228 aa2.35□□□□□ -2.03
PHO88YBR106W YER134CP40081 178 aa2.35□□□□□ -2.03
PHO88YBR106W YER181CP40097 107 aa2.35□□□□□ -2.03
PHO88YBR106W GAT4P40569 121 aa2.35□□□□□ -2.03
PHO88YBR106W SMD3P43321 101 aaKnown RBP2.35□□□□□ -2.03
PHO88YBR106W DIE2P50076 525 aa2.35□□□□□ -2.03
PHO88YBR106W YNL033WP53964 284 aa2.35□□□□□ -2.03
PHO88YBR106W YNL019CP53975 284 aa2.35□□□□□ -2.03
PHO88YBR106W RDS3Q06835 107 aaPredicted RBP2.35□□□□□ -2.03
PHO88YBR106W YML100W-AQ8TGT0 57 aa2.35□□□□□ -2.03
PHO88YBR106W ODC2Q99297 307 aa2.35□□□□□ -2.03
PHO88YBR106W UBC5P15732 148 aa2.34□□□□□ -2.03
PHO88YBR106W RPC19P28000 142 aaKnown RBP2.34□□□□□ -2.03
PHO88YBR106W YBR209WP38311 105 aa2.34□□□□□ -2.03
PHO88YBR106W YEA6P39953 335 aa2.34□□□□□ -2.03
PHO88YBR106W TIR3P40552 269 aa2.34□□□□□ -2.03
PHO88YBR106W RPL33BP41056 107 aaKnown RBP2.34□□□□□ -2.03
PHO88YBR106W YFL019CP43576 117 aa2.34□□□□□ -2.03
PHO88YBR106W RNH202Q05635 350 aa2.34□□□□□ -2.03
PHO88YBR106W YLR042CQ07990 161 aa2.34□□□□□ -2.03
PHO88YBR106W HRT1Q08273 121 aa2.34□□□□□ -2.03
PHO88YBR106W YGL194C-AQ2V2P6 80 aa2.34□□□□□ -2.03
PHO88YBR106W YLR412C-AQ3E742 68 aa2.34□□□□□ -2.03
PHO88YBR106W FAS1P07149 2051 aaKnown RBP2.33□□□□□ -2.04
PHO88YBR106W TRA1P38811 3744 aa2.33□□□□□ -2.04
PHO88YBR106W SPS2P08459 502 aa2.33□□□□□ -2.04
PHO88YBR106W MRS4P23500 304 aa2.33□□□□□ -2.04
PHO88YBR106W AHT1P29589 182 aa2.33□□□□□ -2.04
PHO88YBR106W YBR090CP38253 122 aa2.33□□□□□ -2.04
PHO88YBR106W YNR062CP53748 327 aa2.33□□□□□ -2.04
PHO88YBR106W VPS28Q02767 242 aa2.33□□□□□ -2.04
PHO88YBR106W TVP18Q04767 167 aa2.33□□□□□ -2.04
PHO88YBR106W NAT3Q06504 195 aa2.33□□□□□ -2.04
PHO88YBR106W YCR075W-AQ3E830 75 aa2.33□□□□□ -2.04
PHO88YBR106W ATP15P21306 62 aa2.32□□□□□ -2.04
PHO88YBR106W PRE1P22141 198 aaKnown RBP2.32□□□□□ -2.04
PHO88YBR106W FYV4P38783 130 aaPredicted RBP2.32□□□□□ -2.04
PHO88YBR106W YHR180WP38868 163 aa2.32□□□□□ -2.04
PHO88YBR106W YJR146WP47174 117 aa2.32□□□□□ -2.04
PHO88YBR106W BAT2P47176 376 aaKnown RBP2.32□□□□□ -2.04
PHO88YBR106W SBH1P52870 82 aa2.32□□□□□ -2.04
PHO88YBR106W DOC1P53068 250 aa2.32□□□□□ -2.04
PHO88YBR106W GEP7P53171 287 aa2.32□□□□□ -2.04
PHO88YBR106W YDR274CP87283 123 aa2.32□□□□□ -2.04
PHO88YBR106W EST3Q03096 181 aa2.32□□□□□ -2.04
PHO88YBR106W MRPS8Q03799 155 aa2.32□□□□□ -2.04
PHO88YBR106W SPG3Q04398 127 aaPredicted RBP2.32□□□□□ -2.04
PHO88YBR106W YMR252CQ04814 134 aa2.32□□□□□ -2.04
PHO88YBR106W FCF2Q12035 217 aaPredicted RBP2.32□□□□□ -2.04
PHO88YBR106W GTT2Q12390 233 aa2.32□□□□□ -2.04
PHO88YBR106W NSG1P38837 291 aa2.31□□□□□ -2.04
PHO88YBR106W VTC1P40046 129 aaRIP-Chip data2.31□□□□□ -2.04not detected
PHO88YBR106W YNL217WP40152 326 aa2.31□□□□□ -2.04
PHO88YBR106W YNL200CP40165 246 aaKnown RBP2.31□□□□□ -2.04
PHO88YBR106W LSM8P47093 109 aaKnown RBP2.31□□□□□ -2.04
PHO88YBR106W SAY1P53324 424 aa2.31□□□□□ -2.04
PHO88YBR106W YMR295CQ03559 197 aa2.31□□□□□ -2.04
PHO88YBR106W KTI11Q3E840 82 aa2.31□□□□□ -2.04
PHO88YBR106W MSB2P32334 1306 aa2.31□□□□□ -2.04
PHO88YBR106W HAP3P13434 144 aa2.3□□□□□ -2.04
PHO88YBR106W ECM31P38122 312 aa2.3□□□□□ -2.04
PHO88YBR106W SFT2P38166 215 aa2.3□□□□□ -2.04
PHO88YBR106W HTD2P38790 280 aaKnown RBP2.3□□□□□ -2.04
PHO88YBR106W MPM1P40364 252 aa2.3□□□□□ -2.04
PHO88YBR106W PHS1P40857 217 aa2.3□□□□□ -2.04
PHO88YBR106W EMC4P53073 190 aa2.3□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 43.7 ms