RNA–Protein interactions for RNA: YAR002W

NUP60, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP60, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP60YAR002W WWM1P43582 211 aaKnown RBP2.69□□□□□ -1.98
NUP60YAR002W YJL027CP47063 138 aaPredicted RBP2.69□□□□□ -1.98
NUP60YAR002W ABM1P47146 123 aa2.69□□□□□ -1.98
NUP60YAR002W GLO1P50107 326 aa2.69□□□□□ -1.98
NUP60YAR002W IZH1Q03419 316 aa2.69□□□□□ -1.98
NUP60YAR002W YCR024C-BQ3E7Z8 88 aa2.69□□□□□ -1.98
NUP60YAR002W HTB2P02294 131 aa2.68□□□□□ -1.98
NUP60YAR002W FUN14P18411 198 aa2.68□□□□□ -1.98
NUP60YAR002W FZF1P32805 299 aa2.68□□□□□ -1.98
NUP60YAR002W VMA11P32842 164 aa2.68□□□□□ -1.98
NUP60YAR002W AME1P38313 324 aa2.68□□□□□ -1.98
NUP60YAR002W GLE2P40066 365 aa2.68□□□□□ -1.98
NUP60YAR002W YFR045WP43617 309 aa2.68□□□□□ -1.98
NUP60YAR002W RPA43P46669 326 aa2.68□□□□□ -1.98
NUP60YAR002W SWT21P53873 357 aaPredicted RBP2.68□□□□□ -1.98
NUP60YAR002W RPL15BP54780 204 aaPredicted RBP2.68□□□□□ -1.98
NUP60YAR002W TIM18Q08749 192 aa2.68□□□□□ -1.98
NUP60YAR002W CYC3P06182 269 aa2.68□□□□□ -1.98
NUP60YAR002W SEC4P07560 215 aaKnown RBP2.68□□□□□ -1.98
NUP60YAR002W RPL31BP0C2H9 113 aaKnown RBP2.68□□□□□ -1.98
NUP60YAR002W MRPL31P14063 131 aaPredicted RBP2.68□□□□□ -1.98
NUP60YAR002W MRPL44P19956 98 aa2.68□□□□□ -1.98
NUP60YAR002W MRPL20P22354 195 aaPredicted RBP2.68□□□□□ -1.98
NUP60YAR002W VMA16P23968 213 aa2.68□□□□□ -1.98
NUP60YAR002W MBB1P39534 108 aa2.68□□□□□ -1.98
NUP60YAR002W SNU13P39990 126 aaKnown RBP2.68□□□□□ -1.98
NUP60YAR002W YMR141CP40211 102 aa2.68□□□□□ -1.98
NUP60YAR002W CDC40P40968 455 aaPredicted RBP2.68□□□□□ -1.98
NUP60YAR002W AIM24P47127 394 aa2.68□□□□□ -1.98
NUP60YAR002W TDA4P47153 279 aa2.68□□□□□ -1.98
NUP60YAR002W DUG3P53871 357 aa2.68□□□□□ -1.98
NUP60YAR002W DAD4P69851 72 aa2.68□□□□□ -1.98
NUP60YAR002W DAD1Q12248 94 aa2.68□□□□□ -1.98
NUP60YAR002W YBR126W-AQ8TGU7 68 aa2.68□□□□□ -1.98
NUP60YAR002W ZRT1P32804 376 aa2.67□□□□□ -1.98
NUP60YAR002W GSP1P32835 219 aaKnown RBP2.67□□□□□ -1.98
NUP60YAR002W GSP2P32836 220 aaKnown RBP2.67□□□□□ -1.98
NUP60YAR002W YKL102CP34249 101 aa2.67□□□□□ -1.98
NUP60YAR002W PAU7P39545 55 aa2.67□□□□□ -1.98
NUP60YAR002W YER134CP40081 178 aa2.67□□□□□ -1.98
NUP60YAR002W POR2P40478 281 aa2.67□□□□□ -1.98
NUP60YAR002W DUO1P53168 247 aaKnown RBP2.67□□□□□ -1.98
NUP60YAR002W SDS23P53172 527 aa2.67□□□□□ -1.98
NUP60YAR002W YGR219WP53307 113 aa2.67□□□□□ -1.98
NUP60YAR002W UBC7Q02159 165 aa2.67□□□□□ -1.98
NUP60YAR002W YMR317WQ04893 1140 aa2.67□□□□□ -1.98
NUP60YAR002W CSM4Q08955 156 aa2.67□□□□□ -1.98
NUP60YAR002W FYV7Q12247 151 aa2.67□□□□□ -1.98
NUP60YAR002W Q0297Q9ZZV8 51 aa2.67□□□□□ -1.98
NUP60YAR002W RPL43AP0CX25 92 aaKnown RBP2.66□□□□□ -1.98
NUP60YAR002W RPL43BP0CX26 92 aa2.66□□□□□ -1.98
NUP60YAR002W RPL23AP0CX41 137 aaKnown RBP2.66□□□□□ -1.98
NUP60YAR002W RPL23BP0CX42 137 aaKnown RBP2.66□□□□□ -1.98
NUP60YAR002W PAU16P35994 123 aa2.66□□□□□ -1.98
NUP60YAR002W TEM1P38987 245 aa2.66□□□□□ -1.98
NUP60YAR002W SEC72P39742 193 aaKnown RBP2.66□□□□□ -1.98
NUP60YAR002W YGL118CP53132 145 aa2.66□□□□□ -1.98
NUP60YAR002W GEP3Q08622 556 aa2.66□□□□□ -1.98
NUP60YAR002W FSF1Q12029 327 aaKnown RBP2.66□□□□□ -1.98
NUP60YAR002W YLR112WQ12130 139 aa2.66□□□□□ -1.98
NUP60YAR002W POM33Q12164 279 aa2.66□□□□□ -1.98
NUP60YAR002W UTP23Q12339 254 aaKnown RBP2.66□□□□□ -1.98
NUP60YAR002W YLR342W-AQ3E810 57 aa2.66□□□□□ -1.98
NUP60YAR002W BPH1P25356 2167 aa2.65□□□□□ -1.98
NUP60YAR002W CPT1P17898 393 aa2.65□□□□□ -1.98
NUP60YAR002W PRS4P38063 326 aaPredicted RBP2.65□□□□□ -1.98
NUP60YAR002W MIC12P38341 106 aa2.65□□□□□ -1.98
NUP60YAR002W PRE5P40302 234 aaKnown RBP2.65□□□□□ -1.98
NUP60YAR002W YJL028WP47062 111 aa2.65□□□□□ -1.98
NUP60YAR002W BRP1P53194 125 aa2.65□□□□□ -1.98
NUP60YAR002W THG1P53215 237 aaKnown RBP2.65□□□□□ -1.98
NUP60YAR002W CAB4P53332 305 aa2.65□□□□□ -1.98
NUP60YAR002W ARC18Q05933 178 aaKnown RBP2.65□□□□□ -1.98
NUP60YAR002W CNL1Q06333 122 aa2.65□□□□□ -1.98
NUP60YAR002W YOL160WQ08321 113 aa2.65□□□□□ -1.98
NUP60YAR002W WIP1Q2V2P8 89 aa2.65□□□□□ -1.98
NUP60YAR002W ATP5P09457 212 aa2.64□□□□□ -1.99
NUP60YAR002W INO2P26798 304 aa2.64□□□□□ -1.99
NUP60YAR002W SNF11P38956 169 aa2.64□□□□□ -1.99
NUP60YAR002W YNL200CP40165 246 aaKnown RBP2.64□□□□□ -1.99
NUP60YAR002W YMR181CQ03231 154 aa2.64□□□□□ -1.99
NUP60YAR002W UPS3Q04006 179 aa2.64□□□□□ -1.99
NUP60YAR002W GTO3Q04806 366 aa2.64□□□□□ -1.99
NUP60YAR002W NAT5Q08689 176 aa2.64□□□□□ -1.99
NUP60YAR002W TPT1Q12272 230 aaKnown RBP2.64□□□□□ -1.99
NUP60YAR002W YDL085C-AQ3E7B7 68 aaKnown RBP2.64□□□□□ -1.99
NUP60YAR002W RPL27AP0C2H6 136 aaKnown RBP2.64□□□□□ -1.99
NUP60YAR002W RPL12AP0CX53 165 aaKnown RBP2.64□□□□□ -1.99
NUP60YAR002W RPL12BP0CX54 165 aa2.64□□□□□ -1.99
NUP60YAR002W CMC1P36064 111 aa2.64□□□□□ -1.99
NUP60YAR002W YNL194CP40169 301 aa2.64□□□□□ -1.99
NUP60YAR002W YPI1P43587 155 aa2.64□□□□□ -1.99
NUP60YAR002W LCB3P47013 409 aa2.64□□□□□ -1.99
NUP60YAR002W SAE3P89114 91 aa2.64□□□□□ -1.99
NUP60YAR002W PKR1Q03880 122 aaKnown RBP2.64□□□□□ -1.99
NUP60YAR002W RPL42AP0CX27 106 aaKnown RBP2.63□□□□□ -1.99
NUP60YAR002W RPL42BP0CX28 106 aaKnown RBP2.63□□□□□ -1.99
NUP60YAR002W SPI1P40092 148 aa2.63□□□□□ -1.99
NUP60YAR002W COX16P47081 118 aa2.63□□□□□ -1.99
NUP60YAR002W VPS55P47111 140 aa2.63□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 44.5 ms