RNA–Protein interactions for RNA: YAL005C

SSA1, Transcript of ATPase involved in protein folding and NLS-directed nuclear transport, yeastyeast

Gene SSA1, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSA1YAL005C YGR035W-AQ45U48 73 aa10.46□□□□□ -0.74
SSA1YAL005C GLC8P41818 229 aa10.45□□□□□ -0.74
SSA1YAL005C TVP18Q04767 167 aa10.45□□□□□ -0.74
SSA1YAL005C LDS2Q08218 356 aa10.45□□□□□ -0.74
SSA1YAL005C HSP12P22943 109 aaKnown RBP10.45□□□□□ -0.74
SSA1YAL005C MRPL24P36525 258 aaPredicted RBP10.44□□□□□ -0.74
SSA1YAL005C TIR2P33890 251 aa10.43□□□□□ -0.74
SSA1YAL005C YPT53P36019 220 aa10.43□□□□□ -0.74
SSA1YAL005C CAX4P53223 239 aa10.43□□□□□ -0.74
SSA1YAL005C YCR023CP25351 611 aa10.43□□□□□ -0.74
SSA1YAL005C PHS1P40857 217 aa10.43□□□□□ -0.74
SSA1YAL005C YPI1P43587 155 aa10.43□□□□□ -0.74
SSA1YAL005C YHR212W-AP0CX91 67 aa10.42□□□□□ -0.74
SSA1YAL005C BNS1P50084 137 aa10.42□□□□□ -0.74
SSA1YAL005C COQ3P27680 312 aa10.41□□□□□ -0.74
SSA1YAL005C HUA1P40325 198 aa10.41□□□□□ -0.74
SSA1YAL005C NNK1P36003 928 aa10.41□□□□□ -0.74
SSA1YAL005C YIL163CP40448 117 aa10.41□□□□□ -0.74
SSA1YAL005C ERV14P53173 138 aa10.41□□□□□ -0.74
SSA1YAL005C MRX11Q03079 207 aa10.41□□□□□ -0.74
SSA1YAL005C TRI1Q05024 226 aa10.41□□□□□ -0.74
SSA1YAL005C ERS1P17261 260 aa10.39□□□□□ -0.75
SSA1YAL005C MRPL44P19956 98 aa10.39□□□□□ -0.75
SSA1YAL005C YGR025WP53216 100 aa10.39□□□□□ -0.75
SSA1YAL005C TOM7P53507 60 aa10.39□□□□□ -0.75
SSA1YAL005C RAV2Q03956 351 aa10.39□□□□□ -0.75
SSA1YAL005C RPS22AP0C0W1 130 aaKnown RBP10.39□□□□□ -0.75
SSA1YAL005C TY1A-LR4P0C2I8 440 aaKnown RBP10.39□□□□□ -0.75
SSA1YAL005C RPL18AP0CX49 186 aaKnown RBP10.39□□□□□ -0.75
SSA1YAL005C RPL18BP0CX50 186 aaKnown RBP10.39□□□□□ -0.75
SSA1YAL005C TY1A-DR6P0CX70 440 aa10.39□□□□□ -0.75
SSA1YAL005C TY1A-ER1P0CX71 440 aa10.39□□□□□ -0.75
SSA1YAL005C TY1A-LR2P0CX72 440 aa10.39□□□□□ -0.75
SSA1YAL005C TY1A-PLP0CX73 440 aa10.39□□□□□ -0.75
SSA1YAL005C TY1A-JR1P0CX74 440 aa10.39□□□□□ -0.75
SSA1YAL005C TY1A-LR3P0CX75 440 aa10.39□□□□□ -0.75
SSA1YAL005C TY1A-ML2P0CX76 440 aa10.39□□□□□ -0.75
SSA1YAL005C YHR173CP38864 112 aa10.39□□□□□ -0.75
SSA1YAL005C MST28P39552 234 aa10.39□□□□□ -0.75
SSA1YAL005C LCB3P47013 409 aa10.39□□□□□ -0.75
SSA1YAL005C MST27P53176 234 aa10.39□□□□□ -0.75
SSA1YAL005C APS2Q00381 147 aa10.39□□□□□ -0.75
SSA1YAL005C TY1A-GR1Q12085 440 aa10.39□□□□□ -0.75
SSA1YAL005C TY1A-PR3Q6Q5H1 440 aaKnown RBP10.39□□□□□ -0.75
SSA1YAL005C TY1A-OLQ92392 440 aaKnown RBP10.39□□□□□ -0.75
SSA1YAL005C SNF11P38956 169 aa10.38□□□□□ -0.75
SSA1YAL005C NTF2P33331 125 aaKnown RBP10.37□□□□□ -0.75
SSA1YAL005C VHS2P40463 436 aa10.37□□□□□ -0.75
SSA1YAL005C YGR026WP53217 278 aa10.37□□□□□ -0.75
SSA1YAL005C ATX2Q12067 313 aa10.37□□□□□ -0.75
SSA1YAL005C MRPL49P40858 161 aaPredicted RBP10.37□□□□□ -0.75
SSA1YAL005C MGA1P53050 456 aa10.37□□□□□ -0.75
SSA1YAL005C PKR1Q03880 122 aaKnown RBP10.37□□□□□ -0.75
SSA1YAL005C YOL160WQ08321 113 aa10.37□□□□□ -0.75
SSA1YAL005C YPR145C-AQ2V2P0 78 aa10.37□□□□□ -0.75
SSA1YAL005C CYB5P40312 120 aa10.36□□□□□ -0.75
SSA1YAL005C IZH3Q07959 543 aa10.36□□□□□ -0.75
SSA1YAL005C MED7Q08278 222 aa10.36□□□□□ -0.75
SSA1YAL005C MRS1P07266 363 aa10.35□□□□□ -0.75
SSA1YAL005C MBB1P39534 108 aa10.35□□□□□ -0.75
SSA1YAL005C TAR1Q8TGM6 124 aa10.35□□□□□ -0.75
SSA1YAL005C YLR050CQ12155 161 aaKnown RBP10.33□□□□□ -0.76
SSA1YAL005C SAL1D6W196 494 aa10.33□□□□□ -0.76
SSA1YAL005C YBR090CP38253 122 aa10.33□□□□□ -0.76
SSA1YAL005C GPI2P46961 280 aa10.33□□□□□ -0.76
SSA1YAL005C ADH3P07246 375 aaKnown RBP10.32□□□□□ -0.76
SSA1YAL005C RPB3P16370 318 aaKnown RBP10.32□□□□□ -0.76
SSA1YAL005C UTR5P32630 166 aa10.32□□□□□ -0.76
SSA1YAL005C COX18P53239 316 aa10.32□□□□□ -0.76
SSA1YAL005C DAD3P69850 94 aa10.32□□□□□ -0.76
SSA1YAL005C YBR144CP34215 104 aa10.31□□□□□ -0.76
SSA1YAL005C MRPS9P38120 278 aa10.31□□□□□ -0.76
SSA1YAL005C ATG8P38182 117 aaRIP-Chip data10.31□□□□□ -0.76not detected
SSA1YAL005C NAT3Q06504 195 aa10.31□□□□□ -0.76
SSA1YAL005C YPR014CQ6B0W2 109 aa10.31□□□□□ -0.76
SSA1YAL005C YER076CP40049 302 aa10.31□□□□□ -0.76
SSA1YAL005C SIM1P40472 476 aa10.31□□□□□ -0.76
SSA1YAL005C VMA21P41806 77 aa10.31□□□□□ -0.76
SSA1YAL005C MLF3P32047 452 aa10.3□□□□□ -0.76
SSA1YAL005C YOR011W-AQ3E807 68 aa10.3□□□□□ -0.76
SSA1YAL005C MRP49P32388 137 aa10.29□□□□□ -0.76
SSA1YAL005C STP4Q07351 490 aa10.29□□□□□ -0.76
SSA1YAL005C CPR1P14832 162 aaKnown RBP10.29□□□□□ -0.76
SSA1YAL005C MIG1P27705 504 aa10.29□□□□□ -0.76
SSA1YAL005C SRP21P32342 167 aa10.29□□□□□ -0.76
SSA1YAL005C RTG1P32607 177 aa10.29□□□□□ -0.76
SSA1YAL005C YMR141CP40211 102 aa10.29□□□□□ -0.76
SSA1YAL005C LRS4Q04087 347 aaKnown RBP10.29□□□□□ -0.76
SSA1YAL005C PRM7Q12459 698 aa10.29□□□□□ -0.76
SSA1YAL005C TDA4P47153 279 aa10.28□□□□□ -0.76
SSA1YAL005C MMS2P53152 137 aa10.28□□□□□ -0.76
SSA1YAL005C FMP49A0A023PZB3 126 aa10.27□□□□□ -0.76
SSA1YAL005C YKR041WP36134 250 aa10.27□□□□□ -0.76
SSA1YAL005C YLR118CQ12354 227 aa10.27□□□□□ -0.76
SSA1YAL005C ECM33P38248 429 aaKnown RBP10.27□□□□□ -0.77
SSA1YAL005C NSE4P43124 402 aa10.27□□□□□ -0.77
SSA1YAL005C DAN1P47178 298 aa10.27□□□□□ -0.77
SSA1YAL005C KTI12P34253 313 aaKnown RBP10.26□□□□□ -0.77
SSA1YAL005C AIR2Q12476 344 aaKnown RBP10.26□□□□□ -0.77
SSA1YAL005C VAR1P02381 398 aa10.25□□□□□ -0.77
Retrieved 100 of 5,963 RNA–protein pairs in 67.5 ms