RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 ELMOD1Q8N336 334 aa28.46■■■□□ 2.15
VEGFA-231ENST00000640499 CNOT6LQ96LI5 555 aaKnown RBP28.46■■■□□ 2.15
VEGFA-231ENST00000640499 IMPG2Q9BZV3 1241 aa28.46■■■□□ 2.15
VEGFA-231ENST00000640499 IL21Q9HBE4 155 aa28.46■■■□□ 2.15
VEGFA-231ENST00000640499 MAGEC2Q9UBF1 373 aaPredicted RBP28.46■■■□□ 2.15
VEGFA-231ENST00000640499 MRPS23Q9Y3D9 190 aaKnown RBP28.46■■■□□ 2.15
VEGFA-231ENST00000640499 ASB3Q9Y575 518 aa28.46■■■□□ 2.15
VEGFA-231ENST00000640499 CLDN5O00501 218 aa28.45■■■□□ 2.14
VEGFA-231ENST00000640499 BDNFP23560 247 aa28.45■■■□□ 2.14
VEGFA-231ENST00000640499 MAGEA11P43364 429 aa28.45■■■□□ 2.14
VEGFA-231ENST00000640499 CT47A1Q5JQC4 288 aaPredicted RBP28.45■■■□□ 2.14
VEGFA-231ENST00000640499 GAREM2Q75VX8 874 aa28.45■■■□□ 2.14
VEGFA-231ENST00000640499 ACOT1Q86TX2 421 aa28.45■■■□□ 2.14
VEGFA-231ENST00000640499 SHKBP1Q8TBC3 707 aa28.45■■■□□ 2.14
VEGFA-231ENST00000640499 FAXDC2Q96IV6 333 aa28.45■■■□□ 2.14
VEGFA-231ENST00000640499 ANHXE9PGG2 379 aa28.44■■■□□ 2.14
VEGFA-231ENST00000640499 CCDC192P0DO97 292 aa28.44■■■□□ 2.14
VEGFA-231ENST00000640499 MYL4P12829 197 aa28.44■■■□□ 2.14
VEGFA-231ENST00000640499 CYP27A1Q02318 531 aa28.44■■■□□ 2.14
VEGFA-231ENST00000640499 MTMR3Q13615 1198 aa28.44■■■□□ 2.14
VEGFA-231ENST00000640499 MAPRE1Q15691 268 aaKnown RBP28.44■■■□□ 2.14
VEGFA-231ENST00000640499 C4orf50Q6ZRC1 276 aa28.44■■■□□ 2.14
VEGFA-231ENST00000640499 C11orf57Q6ZUT1 292 aaPredicted RBP28.44■■■□□ 2.14
VEGFA-231ENST00000640499 PDZD4Q76G19 769 aaPredicted RBP28.44■■■□□ 2.14
VEGFA-231ENST00000640499 UNC93AQ86WB7 457 aa28.44■■■□□ 2.14
VEGFA-231ENST00000640499 RSAD2Q8WXG1 361 aa28.44■■■□□ 2.14
VEGFA-231ENST00000640499 ZNF518BQ9C0D4 1074 aa28.44■■■□□ 2.14
VEGFA-231ENST00000640499 ELOVL4Q9GZR5 314 aa28.44■■■□□ 2.14
VEGFA-231ENST00000640499 SMOC2Q9H3U7 446 aa28.44■■■□□ 2.14
VEGFA-231ENST00000640499 THAP9Q9H5L6 903 aa28.44■■■□□ 2.14
VEGFA-231ENST00000640499 KCNK12Q9HB15 430 aa28.44■■■□□ 2.14
VEGFA-231ENST00000640499 ASAH2Q9NR71 780 aa28.44■■■□□ 2.14
VEGFA-231ENST00000640499 DACH1Q9UI36 760 aa28.44■■■□□ 2.14
VEGFA-231ENST00000640499 UTP18Q9Y5J1 556 aaKnown RBP eCLIP28.44■■■□□ 2.141e-11■□□□□ 9.4
VEGFA-231ENST00000640499 CILPO75339 1184 aa28.43■■■□□ 2.14
VEGFA-231ENST00000640499 MICAL2O94851 1124 aa28.43■■■□□ 2.14
VEGFA-231ENST00000640499 CD58P19256 250 aa28.43■■■□□ 2.14
VEGFA-231ENST00000640499 PTPN21Q16825 1174 aa28.43■■■□□ 2.14
VEGFA-231ENST00000640499 CYP4A22Q5TCH4 519 aa28.43■■■□□ 2.14
VEGFA-231ENST00000640499 MCRS1Q96EZ8 462 aa28.43■■■□□ 2.14
VEGFA-231ENST00000640499 ZSWIM3Q96MP5 696 aa28.43■■■□□ 2.14
VEGFA-231ENST00000640499 RPP25Q9BUL9 199 aaKnown RBP28.43■■■□□ 2.14
VEGFA-231ENST00000640499 SAMSN1Q9NSI8 373 aaKnown RBP28.43■■■□□ 2.14
VEGFA-231ENST00000640499 GREB1Q4ZG55 1949 aa28.43■■■□□ 2.14
VEGFA-231ENST00000640499 P4HA2O15460 535 aa28.42■■■□□ 2.14
VEGFA-231ENST00000640499 DCXO43602 365 aa28.42■■■□□ 2.14
VEGFA-231ENST00000640499 AFPP02771 609 aaKnown RBP28.42■■■□□ 2.14
VEGFA-231ENST00000640499 LRMPQ12912 555 aa28.42■■■□□ 2.14
VEGFA-231ENST00000640499 WDR44Q5JSH3 913 aa28.42■■■□□ 2.14
VEGFA-231ENST00000640499 TMEM150AQ86TG1 271 aa28.42■■■□□ 2.14
VEGFA-231ENST00000640499 FUKQ8N0W3 1084 aa28.42■■■□□ 2.14
VEGFA-231ENST00000640499 C12orf29Q8N999 325 aa28.42■■■□□ 2.14
VEGFA-231ENST00000640499 CCDC150Q8NCX0 1101 aa28.42■■■□□ 2.14
VEGFA-231ENST00000640499 FAM200AQ8TCP9 573 aa28.42■■■□□ 2.14
VEGFA-231ENST00000640499 ZFP37Q9Y6Q3 630 aaPredicted RBP28.42■■■□□ 2.14
VEGFA-231ENST00000640499 ZNF197O14709 1029 aa28.41■■■□□ 2.14
VEGFA-231ENST00000640499 RPL10AP62906 217 aaKnown RBP28.41■■■□□ 2.14
VEGFA-231ENST00000640499 HTR4Q13639 388 aa28.41■■■□□ 2.14
VEGFA-231ENST00000640499 TEAD2Q15562 447 aa28.41■■■□□ 2.14
VEGFA-231ENST00000640499 HSP90AA4PQ58FG1 418 aa28.41■■■□□ 2.14
VEGFA-231ENST00000640499 CAVIN1Q6NZI2 390 aaKnown RBP28.41■■■□□ 2.14
VEGFA-231ENST00000640499 SASS6Q6UVJ0 657 aa28.41■■■□□ 2.14
VEGFA-231ENST00000640499 PARM1Q6UWI2 310 aa28.41■■■□□ 2.14
VEGFA-231ENST00000640499 VSTM1Q6UX27 236 aa28.41■■■□□ 2.14
VEGFA-231ENST00000640499 ITIH5Q86UX2 942 aa28.41■■■□□ 2.14
VEGFA-231ENST00000640499 SCN4BQ8IWT1 228 aa28.41■■■□□ 2.14
VEGFA-231ENST00000640499 UBR7Q8N806 425 aa28.41■■■□□ 2.14
VEGFA-231ENST00000640499 LEMD2Q8NC56 503 aa28.41■■■□□ 2.14
VEGFA-231ENST00000640499 ENOX1Q8TC92 643 aaKnown RBP28.41■■■□□ 2.14
VEGFA-231ENST00000640499 FGF14Q92915 247 aa28.41■■■□□ 2.14
VEGFA-231ENST00000640499 CISHQ9NSE2 258 aa28.41■■■□□ 2.14
VEGFA-231ENST00000640499 A0A1W2PRU2 124 aa28.4■■■□□ 2.14
VEGFA-231ENST00000640499 SLC38A8A6NNN8 435 aa28.4■■■□□ 2.14
VEGFA-231ENST00000640499 NOL4O94818 638 aa28.4■■■□□ 2.14
VEGFA-231ENST00000640499 CUL2Q13617 745 aa28.4■■■□□ 2.14
VEGFA-231ENST00000640499 STXBP5Q5T5C0 1151 aa28.4■■■□□ 2.14
VEGFA-231ENST00000640499 CREBRFQ8IUR6 639 aa28.4■■■□□ 2.14
VEGFA-231ENST00000640499 EHBP1Q8NDI1 1231 aa28.4■■■□□ 2.14
VEGFA-231ENST00000640499 TNIP3Q96KP6 325 aa28.4■■■□□ 2.14
VEGFA-231ENST00000640499 F11P03951 625 aa28.39■■■□□ 2.14
VEGFA-231ENST00000640499 CCDC130P13994 396 aa28.39■■■□□ 2.14
VEGFA-231ENST00000640499 VEPH1Q14D04 833 aa28.39■■■□□ 2.14
VEGFA-231ENST00000640499 KAT5Q92993 513 aa28.39■■■□□ 2.14
VEGFA-231ENST00000640499 C11orf16Q9NQ32 467 aa28.39■■■□□ 2.14
VEGFA-231ENST00000640499 ANO10Q9NW15 660 aa28.39■■■□□ 2.14
VEGFA-231ENST00000640499 GDE1Q9NZC3 331 aa28.39■■■□□ 2.14
VEGFA-231ENST00000640499 F8VP50 259 aa28.38■■■□□ 2.13
VEGFA-231ENST00000640499 GABRR2P28476 465 aa28.38■■■□□ 2.13
VEGFA-231ENST00000640499 GRIK1P39086 918 aa28.38■■■□□ 2.13
VEGFA-231ENST00000640499 RAD23BP54727 409 aa28.38■■■□□ 2.13
VEGFA-231ENST00000640499 ZXDAP98168 799 aa28.38■■■□□ 2.13
VEGFA-231ENST00000640499 TPD52L1Q16890 204 aaPredicted RBP28.38■■■□□ 2.13
VEGFA-231ENST00000640499 FAM35AQ86V20 835 aa28.38■■■□□ 2.13
VEGFA-231ENST00000640499 ARHGEF19Q8IW93 802 aa28.38■■■□□ 2.13
VEGFA-231ENST00000640499 SLC44A3Q8N4M1 653 aa28.38■■■□□ 2.13
VEGFA-231ENST00000640499 SPATA17Q96L03 361 aa28.38■■■□□ 2.13
VEGFA-231ENST00000640499 C8orf48Q96LL4 319 aa28.38■■■□□ 2.13
VEGFA-231ENST00000640499 MYRFLQ96LU7 910 aa28.38■■■□□ 2.13
VEGFA-231ENST00000640499 KCNK16Q96T55 309 aa28.38■■■□□ 2.13
VEGFA-231ENST00000640499 NT5C1AQ9BXI3 368 aa28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms